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2024-05-20 05:12:18

Gene list

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COG category: Translation, ribosomal structure and biogenesis
Organism: Borrelia afzelii, PKo

Number of genes found: 113

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Borrelia afzelii, PKo
NameLocus tagProduct / DescriptionUniProt / TrEMBL protein nameGenomic elementTypeBeginLengthStrandGC-content
NA BAPKO_0703 lysyl-tRNA synthetase PKO-g-P-chrIn1v1.w1 CDS702199 1566 - 0.306513
NA BAPKO_0868 hypothetical protein PKO-g-P-chrIn1v1.w1 CDS865263 948 + 0.2827
NA BAPKO_0726 hypothetical protein PKO-g-P-chrIn1v1.w1 CDS726864 1068 - 0.287453
NA BAPKO_0020 S-adenosylmethionine: tRNA ribosyltransferase- isomerase PKO-g-P-chrIn1v1.w1 CDS19841 1041 - 0.292988
NA BAPKO_0017 conserved hypothetical protein PKO-g-P-chrIn1v1.w1 CDS16587 981 - 0.265036
NA BAPKO_0131 conserved hypothetical protein PKO-g-P-chrIn1v1.w1 CDS124449 750 - 0.289333
NA BAPKO_0199 HemK family methylase, putative PKO-g-P-chrIn1v1.w1 CDS194327 822 + 0.26764
NA BAPKO_0778 hypothetical protein PKO-g-P-chrIn1v1.w1 CDS779420 1005 - 0.284577
NA BAPKO_0741 hypothetical protein PKO-g-P-chrIn1v1.w1 CDS741010 501 + 0.289421
alaS BAPKO_0228 alanyl-tRNA synthetase PKO-g-P-chrIn1v1.w1 CDS223916 1785 - 0.327171
argS BAPKO_0625 arginyl-tRNA synthetase PKO-g-P-chrIn1v1.w1 CDS617744 1758 - 0.282708
asnS BAPKO_0102 asparaginyl-tRNA synthetase PKO-g-P-chrIn1v1.w1 CDS98540 1389 + 0.306695
aspS BAPKO_0468 aspartyl-tRNA synthetase PKO-g-P-chrIn1v1.w1 CDS469419 1761 - 0.277115
ctc BAPKO_0838 general stress protein PKO-g-P-chrIn1v1.w1 CDS826768 549 + 0.338798
cysS BAPKO_0631 cysteinyl-tRNA synthetase PKO-g-P-chrIn1v1.w1 CDS625758 1443 + 0.289674
def BAPKO_0065 polypeptide deformylase PKO-g-P-chrIn1v1.w1 CDS59765 498 - 0.299197
efp BAPKO_0222 translation elongation factor P PKO-g-P-chrIn1v1.w1 CDS218146 579 - 0.309154
fmt BAPKO_0064 methionyl-tRNA formyltransferase PKO-g-P-chrIn1v1.w1 CDS58821 948 - 0.306962
frr BAPKO_0122 ribosome releasing factor PKO-g-P-chrIn1v1.w1 CDS118023 555 - 0.295496
ftsJ BAPKO_0323 cell division protein PKO-g-P-chrIn1v1.w1 CDS318599 570 - 0.291228
fus-1 BAPKO_0568 translation elongation factor G PKO-g-P-chrIn1v1.w1 CDS553561 2082 - 0.352546
fus-2 BAPKO_0736 translation elongation factor G PKO-g-P-chrIn1v1.w1 CDS735591 2010 + 0.29801
gatA BAPKO_0351 Glu-tRNA(Gln) amidotransferase, subunit A PKO-g-P-chrIn1v1.w1 CDS348406 1446 - 0.303596
gatB BAPKO_0350 Glu-tRNA(Gln) amidotransferase, subunit B PKO-g-P-chrIn1v1.w1 CDS346959 1458 - 0.316187
gatC BAPKO_0352 Glu-tRNA(Gln) amidotransferase, subunit C PKO-g-P-chrIn1v1.w1 CDS349862 276 - 0.246377
gltX BAPKO_0381 glutamyl-tRNA synthetase PKO-g-P-chrIn1v1.w1 CDS380745 1473 - 0.306178
glyS BAPKO_0380 glycyl-tRNA synthetase PKO-g-P-chrIn1v1.w1 CDS379390 1338 - 0.323617
hisS BAPKO_0137 histidyl-tRNA synthetase PKO-g-P-chrIn1v1.w1 CDS132115 1371 - 0.281546
hisT BAPKO_0011 pseudouridylate synthase I PKO-g-P-chrIn1v1.w1 CDS11178 741 + 0.268556
ileS BAPKO_0886 isoleucyl-tRNA synthetase PKO-g-P-chrIn1v1.w1 CDS884615 3129 - 0.293384
infA BAPKO_0171 translation initiation factor 1 PKO-g-P-chrIn1v1.w1 CDS170725 222 + 0.310811
infB BAPKO_0854 translation initiation factor 2 PKO-g-P-chrIn1v1.w1 CDS848230 2349 + 0.339293
infC BAPKO_0193 translation initiation factor 3 PKO-g-P-chrIn1v1.w1 CDS188763 561 - 0.322638
ksgA BAPKO_0621 dimethyladenosine transferase PKO-g-P-chrIn1v1.w1 CDS612788 846 - 0.241135
leuS BAPKO_0261 leucyl-tRNA synthetase PKO-g-P-chrIn1v1.w1 CDS255376 2523 + 0.307967
map BAPKO_0106 methionine aminopeptidase PKO-g-P-chrIn1v1.w1 CDS102684 756 - 0.328042
metG BAPKO_0618 methionyl-tRNA synthetase PKO-g-P-chrIn1v1.w1 CDS608549 2175 - 0.288276
miaA BAPKO_0874 2-methylthio-N6-isopentyladenosine tRNA modification enzyme PKO-g-P-chrIn1v1.w1 CDS870159 903 + 0.280177
papS BAPKO_0749 polynucleotide adenylyltransferase PKO-g-P-chrIn1v1.w1 CDS745195 1233 - 0.222222
pheS BAPKO_0540 phenylalanyl-tRNA synthetase, alpha subunit PKO-g-P-chrIn1v1.w1 CDS526733 1563 + 0.305182
pheT BAPKO_0541 phenylalanyl-tRNA synthetase, beta subunit PKO-g-P-chrIn1v1.w1 CDS528283 1704 + 0.288146
pnpA BAPKO_0858 polyribonucleotide nucleotidyltransferase PKO-g-P-chrIn1v1.w1 CDS852271 2169 + 0.346243
prfA BAPKO_0198 peptide chain release factor 1 PKO-g-P-chrIn1v1.w1 CDS193251 1074 + 0.281192
prfB BAPKO_0075 peptide chain release factor 2 PKO-g-P-chrIn1v1.w1 CDS70134 810 + 0.325926
proS BAPKO_0419 prolyl-tRNA synthetase PKO-g-P-chrIn1v1.w1 CDS416528 1467 - 0.325153
pth BAPKO_0839 peptidyl-tRNA hydrolase PKO-g-P-chrIn1v1.w1 CDS827321 567 + 0.29806
rbfA BAPKO_0855 ribosome-binding factor A PKO-g-P-chrIn1v1.w1 CDS850601 363 + 0.280992
rnpA BAPKO_0463 ribonuclease P protein component PKO-g-P-chrIn1v1.w1 CDS463938 336 + 0.261905
rplA BAPKO_0407 ribosomal protein L1 PKO-g-P-chrIn1v1.w1 CDS408385 681 - 0.312775
rplB BAPKO_0509 ribosomal protein L2 PKO-g-P-chrIn1v1.w1 CDS501963 834 + 0.365707
rplC BAPKO_0506 ribosomal protein L3 PKO-g-P-chrIn1v1.w1 CDS500365 621 + 0.351047
rplD BAPKO_0507 ribosomal protein L4 PKO-g-P-chrIn1v1.w1 CDS500995 630 + 0.319048
rplE BAPKO_0518 ribosomal protein L5 PKO-g-P-chrIn1v1.w1 CDS505936 549 + 0.31694
rplF BAPKO_0521 ribosomal protein L6 PKO-g-P-chrIn1v1.w1 CDS507112 543 + 0.316759
rplI BAPKO_0113 ribosomal protein L9 PKO-g-P-chrIn1v1.w1 CDS110699 522 - 0.275862
rplJ BAPKO_0406 ribosomal protein L10 PKO-g-P-chrIn1v1.w1 CDS407892 489 - 0.304703
rplK BAPKO_0408 ribosomal protein L11 PKO-g-P-chrIn1v1.w1 CDS409065 432 - 0.358796
rplL BAPKO_0405 ribosomal protein L7/L12 PKO-g-P-chrIn1v1.w1 CDS407447 375 - 0.378667
rplM BAPKO_0348 ribosomal protein L13 PKO-g-P-chrIn1v1.w1 CDS345646 459 - 0.348584
rplN BAPKO_0516 ribosomal protein L14 PKO-g-P-chrIn1v1.w1 CDS505242 369 + 0.360434
rplO BAPKO_0525 ribosomal protein L15 PKO-g-P-chrIn1v1.w1 CDS508849 438 + 0.3379
rplP BAPKO_0513 ribosomal protein L16 PKO-g-P-chrIn1v1.w1 CDS504338 417 + 0.381295
rplQ BAPKO_0531 ribosomal protein L17 PKO-g-P-chrIn1v1.w1 CDS512616 372 + 0.284946
rplR BAPKO_0522 ribosomal protein L18 PKO-g-P-chrIn1v1.w1 CDS507672 360 + 0.288889
rplS BAPKO_0743 ribosomal protein L19 PKO-g-P-chrIn1v1.w1 CDS742204 360 + 0.288889
rplT BAPKO_0191 ribosomal protein L20 PKO-g-P-chrIn1v1.w1 CDS188172 348 - 0.318966
rplU BAPKO_0827 ribosomal protein L21 PKO-g-P-chrIn1v1.w1 CDS822134 312 + 0.278846
rplV BAPKO_0511 ribosomal protein L22 PKO-g-P-chrIn1v1.w1 CDS503092 363 + 0.341598
rplW BAPKO_0508 ribosomal protein L23 PKO-g-P-chrIn1v1.w1 CDS501645 297 + 0.289562
rplX BAPKO_0517 ribosomal protein L24 PKO-g-P-chrIn1v1.w1 CDS505625 306 + 0.284314
rpmA BAPKO_0829 ribosomal protein L27 PKO-g-P-chrIn1v1.w1 CDS822771 246 + 0.353659
rpmB BAPKO_0359 ribosomal protein L28 PKO-g-P-chrIn1v1.w1 CDS358022 279 - 0.297491
rpmC BAPKO_0514 ribosomal protein L29 PKO-g-P-chrIn1v1.w1 CDS504757 201 + 0.258706
rpmE BAPKO_0238 ribosomal protein L31 PKO-g-P-chrIn1v1.w1 CDS234198 246 - 0.300813
rpmF BAPKO_0746 ribosomal protein L32 PKO-g-P-chrIn1v1.w1 CDS744039 183 + 0.322404
rpmG BAPKO_0412 ribosomal protein L33 PKO-g-P-chrIn1v1.w1 CDS410406 180 - 0.311111
rpmH BAPKO_0462 ribosomal protein L34 PKO-g-P-chrIn1v1.w1 CDS463802 156 + 0.307692
rpmI BAPKO_0192 ribosomal protein L35 PKO-g-P-chrIn1v1.w1 CDS188540 201 - 0.248756
rpmJ BAPKO_0527 ribosomal protein L36 PKO-g-P-chrIn1v1.w1 CDS510616 114 + 0.254386
rpsA BAPKO_0129 ribosomal protein S1 PKO-g-P-chrIn1v1.w1 CDS122142 1656 - 0.306763
rpsB BAPKO_0124 ribosomal protein S2 PKO-g-P-chrIn1v1.w1 CDS119451 774 - 0.31137
rpsC BAPKO_0512 ribosomal protein S3 PKO-g-P-chrIn1v1.w1 CDS503458 876 + 0.311644
rpsD BAPKO_0652 ribosomal protein S4 PKO-g-P-chrIn1v1.w1 CDS646261 627 - 0.326954
rpsE BAPKO_0523 ribosomal protein S5 PKO-g-P-chrIn1v1.w1 CDS508044 498 + 0.36747
rpsF BAPKO_0116 ribosomal protein S6 PKO-g-P-chrIn1v1.w1 CDS112003 420 - 0.278571
rpsG BAPKO_0401 ribosomal protein S7 PKO-g-P-chrIn1v1.w1 CDS398808 474 - 0.324895
rpsH BAPKO_0520 ribosomal protein S8 PKO-g-P-chrIn1v1.w1 CDS506697 399 + 0.280702
rpsI BAPKO_0347 ribosomal protein S9 PKO-g-P-chrIn1v1.w1 CDS345234 411 - 0.318735
rpsJ BAPKO_0505 ribosomal protein S10 PKO-g-P-chrIn1v1.w1 CDS500018 312 + 0.330128
rpsK BAPKO_0529 ribosomal protein S11 PKO-g-P-chrIn1v1.w1 CDS511152 393 + 0.348601
rpsL BAPKO_0402 ribosomal protein S12 PKO-g-P-chrIn1v1.w1 CDS399306 375 - 0.370667
rpsM BAPKO_0528 ribosomal protein S13 PKO-g-P-chrIn1v1.w1 CDS510747 378 + 0.335979
rpsN BAPKO_0519 ribosomal protein S14 PKO-g-P-chrIn1v1.w1 CDS506502 186 + 0.327957
rpsO BAPKO_0857 ribosomal protein S15 PKO-g-P-chrIn1v1.w1 CDS851990 267 + 0.318352
rpsP BAPKO_0739 ribosomal protein S16 PKO-g-P-chrIn1v1.w1 CDS740497 261 + 0.318008
rpsQ BAPKO_0515 ribosomal protein S17 PKO-g-P-chrIn1v1.w1 CDS504960 255 + 0.286275
rpsR BAPKO_0114 ribosomal protein S18 PKO-g-P-chrIn1v1.w1 CDS111237 291 - 0.285223
rpsS BAPKO_0510 ribosomal protein S19 PKO-g-P-chrIn1v1.w1 CDS502806 279 + 0.333333
rpsT BAPKO_0242 ribosomal protein S20 PKO-g-P-chrIn1v1.w1 CDS236878 258 - 0.290698
rpsU BAPKO_0266 ribosomal protein S21 PKO-g-P-chrIn1v1.w1 CDS265970 210 + 0.290476
serS BAPKO_0234 seryl-tRNA synthetase PKO-g-P-chrIn1v1.w1 CDS229109 1278 - 0.312207
spoU BAPKO_0052 spoU protein PKO-g-P-chrIn1v1.w1 CDS48370 669 - 0.276532
tgt BAPKO_0862 tRNA-guanine transglycosylase PKO-g-P-chrIn1v1.w1 CDS858347 1128 + 0.316489
thrZ BAPKO_0764 threonyl-tRNA synthetase PKO-g-P-chrIn1v1.w1 CDS761645 1746 + 0.315578
tlyA BAPKO_0534 hemolysin PKO-g-P-chrIn1v1.w1 CDS515352 792 + 0.255051
trmD BAPKO_0742 tRNA guanine-N1 methyltransferase PKO-g-P-chrIn1v1.w1 CDS741507 720 + 0.305556
trsA BAPKO_0004 tryptophanyl-tRNA synthetase PKO-g-P-chrIn1v1.w1 CDS5023 1047 - 0.312321
truB BAPKO_0856 tRNA pseudouridine 55 synthase PKO-g-P-chrIn1v1.w1 CDS850966 849 + 0.273263
tsf BAPKO_0123 translation elongation factor TS PKO-g-P-chrIn1v1.w1 CDS118615 840 - 0.302381
tuf BAPKO_0504 translation elongation factor TU PKO-g-P-chrIn1v1.w1 CDS498782 1185 + 0.363713
tyrS BAPKO_0379 tyrosyl-tRNA synthetase PKO-g-P-chrIn1v1.w1 CDS378176 1218 - 0.293924
valS BAPKO_0781 valyl-tRNA synthetase PKO-g-P-chrIn1v1.w1 CDS782506 2628 + 0.295662
yacO BAPKO_0543 rRNA methylase PKO-g-P-chrIn1v1.w1 CDS531056 741 - 0.265857