Gene list
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COG category: Transcription
Organism: Leptospira borgpetersenii serovar Hardjo-bovis JB197, JB197
Number of genes found: 97
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| Leptospira borgpetersenii serovar Hardjo-bovis JB197, JB197 | |||||||||
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| Name | Locus tag | Product / Description | UniProt / TrEMBL protein name | Genomic element | Type | Begin | Length | Strand | GC-content |
| NA | LBJ_2791 | Transcriptional regulator | SubName: Full=Transcriptional regulator; | chromosome 1 | CDS | 3309324 | 546 | - | 0.408425 |
| NA | LBJ_0287 | Transcriptional regulator, marR family | SubName: Full=Transcriptional regulator, marR family; | chromosome 1 | CDS | 348405 | 450 | - | 0.435556 |
| NA | LBJ_4021 | ParB-like protein | SubName: Full=ParB-like protein; | chromosome 2 | CDS | 23518 | 708 | + | 0.412429 |
| NA | LBJ_0492 | RNA-binding protein | SubName: Full=RNA-binding protein; | chromosome 1 | CDS | 599475 | 261 | - | 0.371648 |
| NA | LBJ_1545 | Transcriptional regulator, HTH domain | SubName: Full=Transcriptional regulator, HTH domain; | chromosome 1 | CDS | 1820363 | 309 | + | 0.378641 |
| NA | LBJ_4239 | Transcriptional regulator, AcrR-family | SubName: Full=Transcriptional regulator, AcrR-family; | chromosome 2 | CDS | 272020 | 699 | + | 0.420601 |
| NA | LBJ_0848 | Transcriptional regulator (ArsR family) | SubName: Full=Transcriptional regulator (ArsR family); | chromosome 1 | CDS | 1030928 | 357 | - | 0.352941 |
| NA | LBJ_4205 | RNA polymerase sigma subunit | SubName: Full=RNA polymerase sigma subunit; | chromosome 2 | CDS | 235887 | 522 | - | 0.386973 |
| NA | LBJ_1244 | Transcriptional regulator, MarR family | SubName: Full=Transcriptional regulator, MarR family; | chromosome 1 | CDS | 1476777 | 441 | - | 0.387755 |
| NA | LBJ_1766 | Transcriptional regulator, AcrR-family | SubName: Full=Transcriptional regulator, AcrR-family; | chromosome 1 | CDS | 2080437 | 552 | + | 0.38587 |
| NA | LBJ_0307 | Serine/threonine kinase with GAF domain | SubName: Full=Serine/threonine kinase with GAF domain; | chromosome 1 | CDS | 380754 | 5211 | - | 0.387642 |
| NA | LBJ_0233 | DNA/RNA helicase Superfamily II | SubName: Full=DNA/RNA helicase Superfamily II; | chromosome 1 | CDS | 271379 | 2856 | + | 0.398109 |
| NA | LBJ_2062 | Hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome 1 | CDS | 2430172 | 369 | + | 0.325203 |
| NA | LBJ_1299 | Transcriptional regulator, ArsR family | SubName: Full=Transcriptional regulator, ArsR family; | chromosome 1 | CDS | 1540438 | 300 | - | 0.393333 |
| NA | LBJ_2727 | Transcriptional regulator, ArsR family | SubName: Full=Transcriptional regulator, ArsR family; | chromosome 1 | CDS | 3237440 | 312 | + | 0.333333 |
| NA | LBJ_1787 | Transcriptional regulator, HTH domain | SubName: Full=Transcriptional regulator, HTH domain; | chromosome 1 | CDS | 2108010 | 345 | + | 0.333333 |
| NA | LBJ_0352 | Receiver component of a two-component response regulator | SubName: Full=Receiver component of a two-component response regulator; | chromosome 1 | CDS | 430365 | 666 | - | 0.421922 |
| NA | LBJ_2576 | Superfamily II DNA and RNA helicase | SubName: Full=Superfamily II DNA and RNA helicase; | chromosome 1 | CDS | 3083440 | 1650 | + | 0.424848 |
| NA | LBJ_1965 | Sensor protein of a two-component response regulator | SubName: Full=Sensor protein of a two-component response regulator; | chromosome 1 | CDS | 2312487 | 669 | - | 0.427504 |
| NA | LBJ_2951 | Transcriptional regulator, AraC family | SubName: Full=Transcriptional regulator, AraC family; | chromosome 1 | CDS | 3503306 | 1623 | + | 0.337646 |
| NA | LBJ_4001 | ParB-like protein | SubName: Full=ParB-like protein; | chromosome 2 | CDS | 875 | 846 | + | 0.353428 |
| NA | LBJ_0275 | Transcriptional regulator, AcrR-family | SubName: Full=Transcriptional regulator, AcrR-family; | chromosome 1 | CDS | 333969 | 594 | - | 0.383838 |
| NA | LBJ_4095 | Serine phosphatase RsbU, regulator of sigma subunit | SubName: Full=Serine phosphatase RsbU, regulator of sigma subunit; | chromosome 2 | CDS | 109141 | 1749 | - | 0.408805 |
| NA | LBJ_4013 | two component regulatory system response regulator | SubName: Full=Two component regulatory system response regulator; | chromosome 2 | CDS | 14693 | 693 | + | 0.445887 |
| NA | LBJ_1805 | Transcriptional regulator | SubName: Full=Transcriptional regulator; | chromosome 1 | CDS | 2129131 | 426 | + | 0.389671 |
| NA | LBJ_2868 | RNA polymerase sigma subunit | SubName: Full=RNA polymerase sigma subunit; | chromosome 1 | CDS | 3398418 | 591 | - | 0.351946 |
| NA | LBJ_0638 | RNA polymerase sigma subunit | SubName: Full=RNA polymerase sigma subunit; | chromosome 1 | CDS | 770856 | 510 | - | 0.396078 |
| NA | LBJ_0931 | Transcriptional regulator | SubName: Full=Transcriptional regulator; | chromosome 1 | CDS | 1115974 | 534 | + | 0.425094 |
| NA | LBJ_0400 | ATP-dependent DNA helicase, recG-related | SubName: Full=ATP-dependent DNA helicase, recG-related; | chromosome 1 | CDS | 489316 | 2175 | + | 0.429885 |
| NA | LBJ_1908 | RNA polymerase sigma subunit | SubName: Full=RNA polymerase sigma subunit; | chromosome 1 | CDS | 2251965 | 549 | - | 0.409836 |
| NA | LBJ_2523 | Transcriptional regulator, PadR family | SubName: Full=Transcriptional regulator, PadR family; | chromosome 1 | CDS | 3016663 | 351 | - | 0.393162 |
| NA | LBJ_0186 | Response regulator | SubName: Full=Response regulator; | chromosome 1 | CDS | 223403 | 705 | - | 0.417021 |
| NA | LBJ_2849 | Acetyltransferase | SubName: Full=Acetyltransferase; | chromosome 1 | CDS | 3373803 | 744 | + | 0.377688 |
| NA | LBJ_0690 | Transcriptional regulator, ArsR family | SubName: Full=Transcriptional regulator, ArsR family; | chromosome 1 | CDS | 830388 | 387 | - | 0.452196 |
| NA | LBJ_0189 | RNA polymerase sigma subunit | SubName: Full=RNA polymerase sigma subunit; | chromosome 1 | CDS | 225159 | 600 | - | 0.365 |
| NA | LBJ_0157 | Conserved hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome 1 | CDS | 192210 | 390 | + | 0.353846 |
| NA | LBJ_0047 | RNA polymerase sigma subunit | SubName: Full=RNA polymerase sigma subunit; | chromosome 1 | CDS | 57533 | 885 | + | 0.477966 |
| NA | LBJ_2583 | Transcriptional regulator | SubName: Full=Transcriptional regulator; | chromosome 1 | CDS | 3092139 | 945 | + | 0.405291 |
| NA | LBJ_0887 | Sigma factor regulatory protein | SubName: Full=Sigma factor regulatory protein; | chromosome 1 | CDS | 1075093 | 1383 | + | 0.403471 |
| NA | LBJ_0265 | Bi-functional protein, with a transcription regulator domain | SubName: Full=Bi-functional protein, with a transcription regulator domain; | chromosome 1 | CDS | 319284 | 795 | - | 0.431447 |
| NA | LBJ_1888 | Sigma factor PP2C-like phosphatase | SubName: Full=Sigma factor PP2C-like phosphatase; | chromosome 1 | CDS | 2233114 | 981 | + | 0.377166 |
| NA | LBJ_0182 | Serine phosphatase RsbU, regulator of sigma subunit | SubName: Full=Serine phosphatase RsbU, regulator of sigma subunit; | chromosome 1 | CDS | 217120 | 2397 | - | 0.365874 |
| NA | LBJ_0997 | Acetyltransferase | SubName: Full=Acetyltransferase; | chromosome 1 | CDS | 1195450 | 498 | - | 0.417671 |
| NA | LBJ_4245 | Response regulator | SubName: Full=Response regulator; | chromosome 2 | CDS | 278362 | 726 | + | 0.422865 |
| NA | LBJ_1723 | Transcriptional regulator | SubName: Full=Transcriptional regulator; | chromosome 1 | CDS | 2030989 | 420 | + | 0.397619 |
| NA | LBJ_2322 | Transcriptional regulator, AcrR-family | SubName: Full=Transcriptional regulator, AcrR-family; | chromosome 1 | CDS | 2775453 | 600 | - | 0.381667 |
| NA | LBJ_0549 | Transcriptional regulator, AcrR-family | SubName: Full=Transcriptional regulator, AcrR-family; | chromosome 1 | CDS | 661745 | 615 | - | 0.406504 |
| NA | LBJ_2316 | Serine phosphatase RsbU, regulator of sigma subunit | SubName: Full=Serine phosphatase RsbU, regulator of sigma subunit; | chromosome 1 | CDS | 2768535 | 1764 | + | 0.407596 |
| NA | LBJ_1025 | Transcriptional regulator, AcrR-family | SubName: Full=Transcriptional regulator, AcrR-family; | chromosome 1 | CDS | 1232960 | 705 | + | 0.419858 |
| NA | LBJ_0766 | Receiver component of a two-component response regulator | SubName: Full=Receiver component of a two-component response regulator; | chromosome 1 | CDS | 923913 | 702 | - | 0.413105 |
| NA | LBJ_2412 | Hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome 1 | CDS | 2883428 | 390 | - | 0.346154 |
| NA | LBJ_0436 | Transcriptional regulator | SubName: Full=Transcriptional regulator; | chromosome 1 | CDS | 528881 | 549 | + | 0.409836 |
| NA | LBJ_0212 | Response regulator | SubName: Full=Response regulator; | chromosome 1 | CDS | 247527 | 774 | - | 0.361757 |
| NA | LBJ_1691 | RNA binding protein | SubName: Full=RNA binding protein; | chromosome 1 | CDS | 1995411 | 366 | - | 0.412568 |
| NA | LBJ_0491 | Transcriptional regulator | RecName: Full=Type III pantothenate kinase; EC=2.7.1.33; AltName: Full=PanK-III; AltName: Full=Pantothenic acid kinase; | chromosome 1 | CDS | 598576 | 774 | + | 0.426357 |
| NA | LBJ_1788 | Transcriptional regulator | SubName: Full=Transcriptional regulator; | chromosome 1 | CDS | 2109110 | 306 | + | 0.343137 |
| NA | LBJ_1646 | ParB-like protein | SubName: Full=ParB-like protein; | chromosome 1 | CDS | 1938307 | 399 | + | 0.373434 |
| NA | LBJ_0697 | Serine phosphatase, regulator of sigma subunit | SubName: Full=Serine phosphatase, regulator of sigma subunit; | chromosome 1 | CDS | 836402 | 1131 | + | 0.432361 |
| NA | LBJ_0260 | Transcriptional regulator, AcrR-family | SubName: Full=Transcriptional regulator, AcrR-family; | chromosome 1 | CDS | 310358 | 513 | - | 0.409357 |
| NA | LBJ_0035 | Transcription antiterminator | SubName: Full=Transcription antiterminator; | chromosome 1 | CDS | 44235 | 540 | - | 0.344444 |
| NA | LBJ_0893 | RNA polymerase sigma subunit | RecName: Full=RNA polymerase sigma factor; | chromosome 1 | CDS | 1081161 | 624 | + | 0.407051 |
| NA | LBJ_1620 | RNA polymerase sigma subunit | RecName: Full=RNA polymerase sigma factor; | chromosome 1 | CDS | 1907203 | 801 | - | 0.405743 |
| NA | LBJ_0099 | Transcriptional regulator, AcrR-family | SubName: Full=Transcriptional regulator, AcrR-family; | chromosome 1 | CDS | 117286 | 624 | - | 0.379808 |
| NA | LBJ_2555 | Transcriptional regulator, AcrR-family | SubName: Full=Transcriptional regulator, AcrR-family; | chromosome 1 | CDS | 3057275 | 594 | - | 0.397306 |
| NA | LBJ_1391 | Transcriptional regulator, AcrR-family | SubName: Full=Transcriptional regulator, AcrR-family; | chromosome 1 | CDS | 1655112 | 579 | - | 0.378238 |
| NA | LBJ_2173 | Transcriptional regulator/sugar kinase | SubName: Full=Transcriptional regulator/sugar kinase; | chromosome 1 | CDS | 2578508 | 897 | + | 0.455964 |
| NA | LBJ_0029 | ParB-like protein | SubName: Full=ParB-like protein; | chromosome 1 | CDS | 37836 | 876 | - | 0.40411 |
| NA | LBJ_2957 | Transcriptional regulator, marR family | SubName: Full=Transcriptional regulator, marR family; | chromosome 1 | CDS | 3512049 | 441 | - | 0.371882 |
| NA | LBJ_1688 | Serine phosphatase sigma subunit regulator | SubName: Full=Serine phosphatase sigma subunit regulator; | chromosome 1 | CDS | 1992480 | 1254 | - | 0.41547 |
| NA | LBJ_2735 | Receiver component of a response regulator | SubName: Full=Receiver component of a response regulator; | chromosome 1 | CDS | 3245771 | 678 | - | 0.356932 |
| NA | LBJ_2781 | RNA polymerase sigma subunit | SubName: Full=RNA polymerase sigma subunit; | chromosome 1 | CDS | 3294825 | 906 | - | 0.36755 |
| NA | LBJ_2042 | Transcriptional regulator | SubName: Full=Transcriptional regulator; | chromosome 1 | CDS | 2407180 | 615 | - | 0.422764 |
| NA | LBJ_1110 | Transcriptional regulator | SubName: Full=Transcriptional regulator; | chromosome 1 | CDS | 1335016 | 321 | + | 0.386293 |
| greA | LBJ_0705 | greA transcription elongation factor-related protein | RecName: Full=Transcription elongation factor; | chromosome 1 | CDS | 844131 | 2784 | + | 0.412716 |
| hrcA | LBJ_0431 | Heat-inducible transcriptional repressor, HrcA | RecName: Full=Heat-inducible transcription repressor HrcA; | chromosome 1 | CDS | 522359 | 1029 | + | 0.417881 |
| lexA | LBJ_1985 | Repressor lexA | RecName: Full=LexA repressor; EC=3.4.21.88; | chromosome 1 | CDS | 2333393 | 612 | - | 0.447712 |
| marR | LBJ_0498 | Transcriptional regulator (MarR family) | SubName: Full=Transcriptional regulator (MarR family); | chromosome 1 | CDS | 603771 | 459 | - | 0.418301 |
| mfd | LBJ_1666 | Transcription-repair coupling factor | RecName: Full=Transcription-repair-coupling factor; Short=TRCF; EC=3.6.4.-; | chromosome 1 | CDS | 1963421 | 3531 | - | 0.433588 |
| nusA | LBJ_0945 | Transcription elongation factor | SubName: Full=Transcription elongation factor; | chromosome 1 | CDS | 1129768 | 1389 | + | 0.468682 |
| nusB | LBJ_2505 | Transcription antitermination protein | RecName: Full=N utilization substance protein B homolog; Short=Protein NusB; | chromosome 1 | CDS | 2992078 | 417 | + | 0.426859 |
| nusG | LBJ_2370 | Transcription antiterminator | RecName: Full=Transcription termination/antitermination protein NusG; | chromosome 1 | CDS | 2837789 | 546 | - | 0.448718 |
| rho | LBJ_0728 | Transcription termination factor Rho | RecName: Full=Transcription termination factor Rho; EC=3.6.4.-; AltName: Full=ATP-dependent helicase Rho; | chromosome 1 | CDS | 871322 | 1446 | - | 0.462656 |
| rnc | LBJ_2111 | Ribonuclease III | RecName: Full=Ribonuclease 3; EC=3.1.26.3; AltName: Full=Ribonuclease III; Short=RNase III; | chromosome 1 | CDS | 2494144 | 744 | - | 0.396505 |
| rpoA | LBJ_2632 | DNA-directed RNA polymerase, alpha subunit | RecName: Full=DNA-directed RNA polymerase subunit alpha; Short=RNAP subunit alpha; EC=2.7.7.6; AltName: Full=RNA polymerase subunit alpha; AltName: Full=Transcriptase subunit alpha; | chromosome 1 | CDS | 3146204 | 978 | - | 0.443763 |
| rpoB | LBJ_2365 | DNA-directed RNA polymerase, beta subunit | RecName: Full=DNA-directed RNA polymerase subunit beta; Short=RNAP subunit beta; EC=2.7.7.6; AltName: Full=RNA polymerase subunit beta; AltName: Full=Transcriptase subunit beta; | chromosome 1 | CDS | 2831712 | 3681 | - | 0.471068 |
| rpoC | LBJ_2364 | DNA-directed RNA polymerase, beta subunit | RecName: Full=DNA-directed RNA polymerase subunit beta; Short=RNAP subunit beta; EC=2.7.7.6; AltName: Full=RNA polymerase subunit beta; AltName: Full=Transcriptase subunit beta; | chromosome 1 | CDS | 2827495 | 4215 | - | 0.4828 |
| rpoD | LBJ_1376 | DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) | RecName: Full=RNA polymerase sigma factor RpoD; AltName: Full=Sigma-70; | chromosome 1 | CDS | 1634149 | 1758 | + | 0.415245 |
| rpoE-1 | LBJ_0518 | RNA polymerase sigma subunit | SubName: Full=RNA polymerase sigma subunit; | chromosome 1 | CDS | 621321 | 543 | - | 0.348066 |
| rpoE-2 | LBJ_0173 | RNA polymerase sigma subunit | SubName: Full=RNA polymerase sigma subunit; | chromosome 1 | CDS | 207392 | 510 | + | 0.380392 |
| rpoN | LBJ_1446 | DNA-directed RNA polymerase sigma-54 subunit | SubName: Full=DNA-directed RNA polymerase sigma-54 subunit; | chromosome 1 | CDS | 1707846 | 1422 | - | 0.40436 |
| rsbU-1 | LBJ_0248 | Serine phosphatase RsbU, regulator of sigma subunit | SubName: Full=Serine phosphatase RsbU, regulator of sigma subunit; | chromosome 1 | CDS | 293075 | 2088 | + | 0.390805 |
| rsbU-2 | LBJ_0643 | Serine phosphatase RsbU, regulator of sigma subunit | SubName: Full=Serine phosphatase RsbU, regulator of sigma subunit; | chromosome 1 | CDS | 775863 | 1797 | - | 0.408459 |
| rsbU-3 | LBJ_0644 | Serine phosphatase RsbU, regulator of sigma subunit | SubName: Full=Serine phosphatase RsbU, regulator of sigma subunit; | chromosome 1 | CDS | 777663 | 1740 | - | 0.403448 |
| rsbU-4 | LBJ_1820 | Serine phosphatase RsbU, regulator of sigma subunit | SubName: Full=Serine phosphatase RsbU, regulator of sigma subunit; | chromosome 1 | CDS | 2149559 | 2811 | - | 0.416222 |
| spoT | LBJ_0842 | GTP pyrophosphokinase | SubName: Full=GTP pyrophosphokinase; | chromosome 1 | CDS | 1021983 | 2025 | + | 0.441481 |
| srmB | LBJ_0225 | ATP-dependent RNA helicase (superfamily II) | SubName: Full=ATP-dependent RNA helicase (Superfamily II); | chromosome 1 | CDS | 259462 | 1542 | - | 0.417639 |
| vacB | LBJ_2992 | Exoribonuclease R | SubName: Full=Exoribonuclease R; | chromosome 1 | CDS | 3545302 | 2268 | + | 0.38933 |
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