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# Leptospira borgpetersenii serovar Hardjo-bovis JB197, JB197

>LBJ_0233 DNA/RNA helicase Superfamily II
MEGALQLSLDFESKSRSGYRGDFCYLTDSPESGIGKIVSSINGKVTIEFA
AVSSKKTVAEDSPYLKILSDYPSPLRNVGEQGELMDLALTAYELKLTHAF
DKLSALSNSRTRLLPHQIESTYIVVNSLRPRFILADEVGLGKTIEAALVM
KELIFRRGYKKVLIVTPSPLLVQWQQELKNKFNEDFEIVKRRNFSTDGDK
NWKNFQHIITSVDFIKNPKYAEEILKTKWDIVIFDEAHRLRRDYHKITRS
YLFAEKISKKCECLLLLTATPFRGKLEELYYLMHLIDPNILGPYHTFVND
YILGNKTDLKDKISKVLLRRRKIEVGGFTKRFAKTVKIELSIVEREFYEE
TTNYVRREYNLAMRTQNRAIGFVMIVFQKLLDSSVFALISALTKRKFLLE
NRLHHIQQMECKLEEWDLDETEDVEEFVSGLDESVQLDLQSLKRELLSLN
RLILLGKKIKEDKKSIKLKETILKLRKEGHSKFIIFTQFRTTQDFLASVL
SDFQVTLFHGSLGADAKENAIVEFKTKTEILICTEAGGEGRNLQFANVLF
NYDLPWSPLKIEQRIGRIHRFGQKDNVFIFNFASKDTVAERILEVLTNKI
RLFEESIGSSDELLGAIEDELDFNSSFMKFVTGNKSRTEMEEEIDNRIKI
AKKGFEKLGALVTPKLIDFNLLDYYNHTLEERSFNNTHLEEFISRFTKIF
PEEAGFKLIRKKSQIYEIDSSQYKGKYGTFDSELALQNDSLEFLAFGHLL
IDRTVSYLIQNQKGWGVSFHSVSNKEYYVFLVEFQFILNRTELFYFETNP
ETGSVRQIEGLPAELRKSHSLSKSSASESSHVELPTNLEESLIRTFLVLD
EIVEFRKKELGDQTLDLFQKEEFKIRTSNQNTLRQLEEKLMRQEAAFKWE
GKPEKKSAMNRTRNEIQKVKEDFDFELRKVRNGKTIQHRFQLFQVYLPNR
V
>LBJ_2868 RNA polymerase sigma subunit
MLEKTSTNQRPFITVAHTSELEKLYNHNKDDLFHYIKKSFYDENSAQDIL
HDSFLNFFRYYEDKSIPDPTSCRMILFRIARNLMINHAKSYYQRNVSLVG
EDASSNFTSKTPSPEFSVLEKIDQSDVKNIIDSLLDIISPEYKEVLLLRY
QQNLKLEEISKILGISISGVSRLIERAEKALAQEGKKIGFQPGNYL
>LBJ_0492 RNA-binding protein
MPINIYVGNLSYDLNEGTLGDLFRVHGTVNSVKIITDQYSGKSKGFGFVE
MPNKDEADKAIKDLDGKNVLTRNLKVNVAKPKNDRF
>LBJ_0887 Sigma factor regulatory protein
MTWIKQFSKLKSGFLNPFTFFEREFNYGEAQSWKDQTKIDQSFIRLAFLL
HFMMYSTFAISEVRNSERGILYLGVIFLVNVMSLALSFQEKFLSWVIHIS
NTVIIFFMMNLFHESFYGFQDLENLQIYNNYFLLISLIVIFQMFRLKKSS
CLLTGMISICLHIIFVSIKRMELGLEDFPIILFVPDVVYGLCIVIGTSSV
IIVKRLISISSELDLEYKYIQQDLTVAKQVQENLFPGRLSIKGIRYEVMR
ITPNHIGGDFFDFVQLREGNTGIFLTDVAGHGIASALVASMVKIMVSTMP
YILKVHPSRLMDYIDDSLNEQFHSYHASAIYMFLDFISREVTFSNAGHPY
LIRGSFQKEFHEVETEGAILGFGIKKPIAEQVKLPLVAQDRFFLYTDGLI
ENKNREGKLLGTEGLLEILNGNRFEKDLGVFKANVQKAVENFFGNVALED
DTLFLIVEVE
>LBJ_0352 Receiver component of a two-component response regulator
MKPTNTKIFLVDDHAILREGLKMILSGQFEICGESGDAEKALDQIGKLNP
DLVITDISMPGLSGIDLVKNLRKQYPNIRTIILSRHDNREYVQKLLELGI
NGYVLKDDAGNDLLRAIEAVHKGETYLSPGITAHFLSGFVGSGKPGEENQ
DAKKAFSVLSDREREILKLVAEGNSNESIGKILGISPATVKVHRANIMKK
LNLHKVADLVMYAIRAGLIES
>LBJ_1908 RNA polymerase sigma subunit
MSAKKEIWEECSILIRKTGDRSSYEKFLQLVTGILRSYLIPRISNPEDRE
DLVQEILIGLHKARDSYREDRHPAPWIFAIARYKTIDYLRKKKVGDRTFS
MDHLEIFASPEPVQEELENVREILKKWLNVLDERQKQILTHLKLEGMSVR
EVSERTGLSEFNVKVITHRAIQKIRKHFSLDL
>LBJ_2735 Receiver component of a response regulator
MKVAPTYSILLAEDDENNAELLIRYLERYNFDVDHVIDGVAAEIRLRKTR
YDLILTDNRMPKFDGIDLLERIPEMNEATPIIFLTVSNEKETIIQAAHNK
KLVAYLLKPIDMRVLIEKICQALKIGAGSLIDKKEYPFEIILLNHTQQGV
EIELKGCPYGKNIEKLVQEISLFLKELSKPNSILIKVNPEFFYFKNGTQV
LYALKVRLATKYEIGKEDVIIQTEH
>LBJ_0931 Transcriptional regulator
MIEALLFVSGEPLKLASIAKSAGIEKIDAREILDELVLDYSEKNGGFLLK
EIAGAYQFVTNESFAELLGNVFREKRREQLSKSSLDTLAIIAYKQPITLP
EIDEIRGVSSRAMVTSLISKKLIKPIGNKEVPGRPALYGTTKEFLIHFGL
NKLSDLPAPVEVKELKFENLDDLLEHE
>LBJ_0400 ATP-dependent DNA helicase, recG-related
MKNSVSKTENTNVKNELLLPVTVIKGVGSSKAAALASIGIHTLQDLLNFF
PRRYLDRSLTDNVLLKTGETVTLIVEVVDAYLAHGKKSRFVVGAKTKNNE
RISIVFFRGVVFFQKIFQPGTTLVVTGRLEYFRGFQLIHPDYEILANAIK
PSYTINSTNLDKKSRQQEPELAELPEMIHAGRIIPLYSSGEVLKSQGLDS
RGFRKILYLALERLKGGISEILPNEIVKRRNLIPREESYREIHFPTDEVS
LDAAKYRLKYEELFYFNLLIEHKKREREKIKRVLWPLPKSETADSVRKNL
LFQLTEDQSSALRKIEELTKRDQPIAVLLQGDVGSGKTLVSLLTALRYMD
NQIQVCMVAPTEILARQHYQTILSFLGNMPFLGIELLVGKEPKKNRYEKL
YRIKKGDTLFVIGTHSVFQEDVLFSELGLVIIDEQHKFGVDQRETLRSKG
KNPDILAMTATPIPRTLCLTLYGDLDLLTIKSKPKGRMPIQTKWFQENRR
EGVYKSIRKYVSSGRQCYIVYPLVEESEKVDLKSCIAAYEHLKHEIFSDF
AVGLVHGKMETEEKDRVMQEFSKNRIQILVSTTVIEVGIDVPNATVMMIE
HADRFGISQLHQLRGRVGRGDEESFCILMTDSKVTEDAKVRLDAMVNFSD
GFALSEIDLQLRGPGELMGVRQSGLPDFRIADLRKDSKLIELTREDAILF
GNPGDLEKEEIRGRFSEGRLLFSN
>LBJ_1110 Transcriptional regulator
MDDALRHKLLRILEENPEVNQREISEILGISLGKVNYCLKALMDKGWIKA
KNFKNSNNKFAYAYFLTPMGIEEKARITVRYLKMKIQEYEQIQKEIEELK
KEVGED
>LBJ_0638 RNA polymerase sigma subunit
MMTESEFTEIVSSTREIVLSAIEKNLAERFSYAIDDVAQETYFRVYKALK
KDQFRKESKLSTWLYTIARNESLRMNDKLRKEEDFLISHTDLNENSKRLN
SQEMIGTLRALLVKIPDKYRKVLEFYLAGYSESQIAETMGVKPGTVKSRA
FRGKEMIKRVGIKEKFYEK
>LBJ_4001 ParB-like protein
MSSKSKRLGSLADVFQAEKLEGTIRKIRLDKILPSENQPRQDRKKGIEDL
ARSLDKDGLLQPIIVTKQNPEDENYKIVAGERRYHAAKQLGWAEIECKIL
DRDEKETFRLAIIENLQRENLSPYEEVEAMSHLKNSFKYTDQELGTLFGK
SRSYMTELLGISNLSKEELRSCKEAGIESKNLLIQAVAASRKGTFSEFLN
LFQTGALKTVKDAKSFNREEENLSTPKITSATNPKVSNLNSTEYKITKKQ
GLIQISSDNEELLGNIFKLIKKEIRKKFNSI
>LBJ_0186 Response regulator
MKNQSGNPGQKVLVVDDEEDIAELIRFHLEENGYQVDTCQNGLEVLPKLE
KNTPDLVILDLMLPGIGGMDLCKKIKEKYSMPIIMVTAKSGETEAVLGLE
LGADDYVRKPFSTRELIARVRSVLRRTKEGEEEEQFEGNITIGNIFLNLK
AHKAFINNFEVDLTLIEYKILNLFMTNPGVAFTRDKLLDRVWGKDIYVTD
RAVDVNIKRLRDKLGDEKERLETIRGIGYRFNEA
>LBJ_2042 Transcriptional regulator
MNPTMEEIETDKESSSSEHITEVVKENLKLIRHTKGFSLDKLASRCGVSR
AMLSQIEQGKSVPTISVLWKIANGLNVPFSELLKEKGAEGVIVMKAENTK
VLFSSSKVFSSRALFPFNGNRKTEFYELILKPGGIEVAEPHSSGTTENIV
VVSGKLRLRVGEKVVELEPKDSVFFRADIPHEYSNPTDQETLMYLVMDYR
DEIN
>LBJ_0287 Transcriptional regulator, marR family
MNEFQIENTLGYRINRGAIIMKIELQNRFKNAGFSITPEEWVILNRLWES
DGMNQNEISQKTLKDKTTVTRFLNGMEKDGLIRRVVAEEDRRSRLIFLTD
KGKLLKEKLIPIAKSLLVDSSTEINKEHLTVTMNVLAQIERNISNLKAK
>LBJ_0697 Serine phosphatase, regulator of sigma subunit
MSSQDYSLYTVLAVDDSEINLKLIVHTLKPLGFQIFTAESAADARSVLLT
NRVDVLLLDVSMPDQDGFSFCRELREIERFKLLPILFITGINREVGFDEA
ISHGGDDFIQKPFQPKELIAKIRAFIRIKILQDEVLEQKRNYERELIMAR
KVQQELLPEKELEWNGVSVSTIFQPLMQIGGDYTDAWIENDSLHIFIADC
SGHGPSAALLAAMLKMQVSSLSPNQSLQEKVQTLRHNLEKILPDEFSITF
FYGILRKDLNFEYSNGGHPPPILYQNGEVTILSGMGPLIIPIEINVKEEF
KSVRFEKGSYLLLYTDGATEITDKSMNILGEEKLKKIFQESVSKGGDILV
SMMEAILAHSDRGTNDDDIAMMVLKL
>LBJ_0893 RNA polymerase sigma subunit
MDSSSTKIEQKQIIPKKPTLREIEIGLLKKIKEGDDEAYIQLVNPFRERL
YRKAVSMVKDGDDAEDIVQDALISGYRSIRNFRADSGVYTWLYRIVVNKS
KDMLAKRKRAKENSMDDKEYQVTDDRVGFEKKIELSDESNYLISKINGLE
DLYKEVIELRYFEEMSYAQIAEVLGTNVGTVKSRLFKAKEFLKHLILQDD
KGEGYFR
>LBJ_1788 Transcriptional regulator
MIHEVLRLLRVFHDLKAKDLAEKLSISPSYLSEIENGKKEPTLELLNKYS
VVFNMPVSSIFLLSEGTEKQSDKKSFKGSLSKLIINFLHKVEGEENAHSS
R
>LBJ_1787 Transcriptional regulator, HTH domain
MNAVYRVYVFFKDFYFLKVPFLRRKRLNSLSGQAKSNIGGEISDEERKSF
FNQLRAARIEVNLTQAQVSERLGKYQSYISKVESGKKRLFIEDFIRLCEL
YNKPPEYFYSVFSK
>LBJ_0690 Transcriptional regulator, ArsR family
MVQQEEKTDQLSLTFAALADPTRRKILAFLRHGETTVKQLAKPFSMSLPA
ITKHLKVLEKAGLISRGREAQWRPARLEPGALKGVADWIDEYRQIWEAGL
DRLDKYLQEFQKMQTNQGRKTDYESGKN
>LBJ_1646 ParB-like protein
MKIRVSDIKVKNRIRKDLGDLGSLKESIQKLGLLHPILIDLNNTLISGER
RLQSVKTLGWEYVEVRIVDIRNKKERVQIEAEENNIRLEFTSEEQERVRE
LLKRYSYTTIFGRILSWILDLFDWLKRFFQKK
>LBJ_0157 Conserved hypothetical protein
MYKKFSDRLKRLIETLGFSQAEFARSIDLKPAFISDLINERAKSFSQESL
LRLRIVHNVNPLWLIAGEGEMLITEIEMKTDFDTDRYRTILRKIRTRPQI
EILLESLLEVPDSELEALGLIIEKFRKKK
>LBJ_0491 Transcriptional regulator
MLLVVDVGNTNTVFGIFENGKNVPLFHKRTVTRKDRTSDELGLFFRGFLR
EFKIENEAITGGIYSSVVPTLNPILERMFQDWFKIEAIRVHYQMKLPFSI
SYPRPYEIGADRLVNAAACVIDSPGKFIIIDLGTATTFCVVSEKPEYLGG
VIAPGLKVSMDALTRNTSQLPPIVFQSPEKILGDSTIESIQAGFFFGWIG
LLEGIIREIKKDKGQDYRVIGTGGLVTVIDAAHPGIFDKIDPLLTLRGLQ
ILHQMNS
>LBJ_2412 Hypothetical protein
MNFSIILKDLMSRKGWNQEDLAKAGEVKQPTVSRYLSGHTIPTLTFVVNL
YKNEKIDPIIFVRDFELDPIDLGLRKSREEKESLTKEVTVFLRFLKNSPD
ALEIFWKIYKMDQSGRKSMNALAERIIEE
>LBJ_2316 Serine phosphatase RsbU, regulator of sigma subunit
MPQTVLESLKLKSILSTSTILNANLDLYQLLPLIMLYSKDLLEADASSLF
LLDETEEFLYCEVALGEKGEIIQKYGRLDIGEGIAGWVAKEKKPIILEDA
YSDSRFNPSWDQKTGYRTRSLVCVPLFIENKIIGTLEILNKTQNRSFNAC
DLNYLTSLSEVAAIAIQNAKIHENLKKRILELSLLYEFEKLIVSEKSIHE
LGSWVLERVLEFLEAKTGTIYIADHTSQTLRILAAKGIPKDAIHTIIVPF
GEGVAGWVAKERKNLLIQNLEEDKRYNLNVKYKFEANSLISSPLIYKDEL
LGVISVNNKKSGFAFHKNDLEMLGAIANRLSMTIKNADLFHKVVNSDREL
QRAREVMSKVIPTTIPYIKGLEVGAEHIPYSNVGGDFYSIFKLDSERTGF
LVADVSGHGLSASVIATVMNTIISTYDKEILSSPSQFFSGLNHALNNKMV
GNFVTAFYCVIDTKKDTILYSNAGHNYPLLLQNSTDSMISLETKGKLIGI
ISDLFFEEKSIHFKIGDRLVLYTDGISEHYSDDRTKRYSEEFISISIHKC
ASKTAQETSAQIISDCIEYCNYSKFSDDVTLLVIDRK
>LBJ_1244 Transcriptional regulator, MarR family
MKEKLSKQSIDTWAAGLKFYTSASSKIESNLTKMKAISLTWYDVLYAVYT
KPKKRSRMSDIAQEIILSKSALTRSVDKLVAEGFLKRERSEEDAREFIIE
ITPSGIQALRDSWPIYEEGIREIFVSKLTPKETSELLRIFRKLNKY
>LBJ_0029 ParB-like protein
MAIKPKALGRGLGNLIPVNENKTPIHFSAEGALREIRISEIRPNPSQPRK
TFSEESLRELSETIKAHGVIQPIVVKQLDVGYEIISGERRYRACKLAGFV
KIPAIVKNVSENQSMEMAIIENIQREDLNPIEEAIAYKTLSEKLNLKITD
ISTRVGKNRSTISNLIRLLQLPDSVQDLIKNGRISEGHARPLLSLADKKK
IEQLAYQIAEKGLTARQVEDLVSNLTEERSSVPEKKKSRKDVNIVELENK
FRKKYSMKIEISHNQNSGKGKMAIVYPNLEAMEKILNALGL
>LBJ_2781 RNA polymerase sigma subunit
MNLSKDKTIDLVSRCGDGEEEALRQFFEIYSEDIYNFPMKIFHLSEDDAG
DFFIYAFERLKTGSRFGSFKGKSSFRTWFYSVLRNMLIDWQRTKRELKVT
NLGKISKEGKEYATIEDEPDTRPEMQEEASEFSDRFNQALEEIGVDKRVI
FKLSYIYYLNLNEDEVQYLLEKTGLTPDALKEKILHLRSELSNREEENIR
MEDKITTLYLNILELKEKQQNTAKIAPILPMEVDKTSHTLKKKYEQRKKL
LEKKKKGHFLARTPYREVADLIGISEGNVSVTLLRLIEKIQKKLDFSDLD
F
>LBJ_0848 Transcriptional regulator (ArsR family)
MLYYSNMYKLDKQDLIFKALADSKRREILDLLRKKPKTTGEICSYFEPLD
RCTVIQHLKILENAGLLIVKRKGRVRWNYLDNVPIQEIYDRWISKYAKPT
LERLAVFKKQMDRDNRTK
>LBJ_0035 Transcription antiterminator
MIENSKVNEWYALYTNPRAEKKLKRLLQERKIECFLPLISKKKKWSDRWK
VVEEPMYPSYIFVKISFFQDRVKILQLPGAHHFVFYSGKPYVIPDEDLNL
IRIFLETYPDRIQVEIQERLLPGKKILIQEGPFAGFKAEIIQRKNEKQII
VKFPGMNLMTSVTLDIKTLKLEETLGSNF
>LBJ_2173 Transcriptional regulator/sugar kinase
MKSYLGIDIGAGSIKASLVAEDGTILGSTSRTTGAETDETQFLDSLAGIV
SEMKNSSLAAVGIGSPGPIDCENGILIQSANLPLLKNVALVDHLKKKFSI
PVYYNNDANLAALGEYRFGLGKGSPSLVILTLGTGLGGGWVYQGKLFDGY
KGSGMEAGHVTYIPNGPLCGCGQRGCTEAYFSASGFLNRYQEKTGNSLNS
AEEFFDRNRKGETVASILLNEGIEALAQLCRGLIHTINPEKIVFTGGLVY
SWDLFGNSLKERIQELIFPIFRTYTQILPGGNISGTLGAAALCMENQK
>LBJ_4021 ParB-like protein
MAKRSDFAGMDLLTAFGEKESSSSEIQVSDIVPNPSQPRVFGKEEVSDLV
ESMKRLGLIEPIVVRKQGKKYQIVAGERRYQAAKVLKWNTITAIETSASE
DRCFEMALAENEKRKSLNPWEVGRAIQFLRKEKRKTAEEVSKVLGFTERY
VKQLSSIARLDQKSVQDLIRSGKDPSVKNLEALLKQKEGRGGEMISSRKS
VPTKMTIQLVGLTLQQREKFLKELSSLKKKYGIKN
>LBJ_4245 Response regulator
MKTILVIEDDPDIGNLIRKSLDSAHYSTTLQTSGEEGLKFYKANHPDMVI
LDLSLPDIDGIEVCRTVRRNDENTPIFIVTARNEEIDRIMGLELGADDYI
TKPFSVRELKTRVDVFFRRWDKKAGIKPNVGASGEIIRGALKIDPVRRRV
TLKDNIVNISRKEFDILQLMAASPGKVFSREMILEAVWGMEWDGFERMID
SHVKRIRSKLEKNSAQPEWIETIWGIGYRFTDNYDNIVIPD
>LBJ_1766 Transcriptional regulator, AcrR-family
MAKDTRDLILKTSLKLFSEQGYHGTTMRQVASKAGMSLGLAYRYFDSKEA
ILEGIIESHDKILKRYITDEVVSNPSREDLIVNVSESIISLVKENEDYLR
LYWNLMLQPKIHRLKRRNIRLVNMIFFETSKKTIRSIKPNYTEFEIKNLA
STTIGYMINYLTNKKEFSLDDFRNYLVHTLKNT
>LBJ_1025 Transcriptional regulator, AcrR-family
MAAVEIFAQKGFSAATTGEIAKKAGVAEGLIFKYFKSKKELLLSLVLPIL
KDFIAPISLKRLQAIFTREFSTLEEFLTAIFEERVTFIVKNRHLIRVIFQ
EASTTFEIQAVLKRVFKEKLAPKLKECLKNFQEKGMIIDMPIDSLFRLIA
TNIAGYVLFTEILYRPEAEGEGYSDQEVELKRTIEFIARGLRPNTKAKPA
LKPRAKKKPSVPTTTKVKKKRNLSIGADSYQEFV
>LBJ_2523 Transcriptional regulator, PadR family
MTLKEESLEAKGITPAMFHILLSLAEGPQHGYGIGKSIETSSGGNFRLGP
GTLYRTLESIRGFGWIRYSRKKILENDDTRRLYYEITSDGKEILVSELKK
LEVTLKKAKKLKLLGN
>LBJ_2727 Transcriptional regulator, ArsR family
MADDTRREIVKLVAKNGELTSTEISQNFKMSPPAISQHLKVLKEAKVLHM
KKEAQKRIYSLNNSGMNEMENWLLDIKNLWNKRLDNLDKYVLKIKKEKFR
DKK
>LBJ_0182 Serine phosphatase RsbU, regulator of sigma subunit
MRNILLLFISLILLSIVLLIGVLQTSSETLRPPFYYYPNGTIIQSSKEFP
SILGKKVDLLELEIAVKMAESGKSYENGIHIYGKGVSETIPVILAPKSYY
SVIQEFTRDILISLLYLSVAIWFFFYTRDLYMLLLFGSLSCLSLFNFFLV
GFHEFHFLFFFFLYFTAFVILNISFRLRGKELPIRWFAPEVIFSLIAGFV
GRSQKADPHIFGILATNGVYFILFCSIICIFFLVLDSIRNLFPLQSLFKK
LSLIFAFSAISILPFVSVEFSELISPDLSKLLILSAFLIFPALIIYGTFT
YSIVPVQIAFSSSLTSIYLILILAGSYLLLLGAFFKFNPIAADKYLEEFN
ILFLCSSVYTISSINRRLSNLVDTWSFKRNHKLHSAMETISAMISAPISM
RATINSLMKKVSEALDITKILVLIPADKFPRTDLKNINFIRISSNSEIWQ
YFATNTEVTVTTHLAYGLGIRESVYKFLHNSGVQLTYPIFNYSRGKEVSG
VFLVGEKNNRKNFNLGELHFLKECTRMASMLLQNYTLLAEEVEKKRIVRD
LNMASIIDKTLHVAENEHIKEIKIGFFSIPAVGISGDYLDIRKLNSNTML
LALGDVSGHGLGTGYLVSAIRGIIQNQIRKKSDLSTIFKVINSFLIERYR
GSEFMTFICGEYNSQEETFEYINAGHSSPICIRKNGKIELRAETQRVLGV
LPTEYKRLTIPIHPGDKLILFTDGVTETFNDNEEIFGDENFLNLLKNNHQ
LNPQDLTDLVLKTIQDFRGKKDPSDDISFICLEVNEKTHELKGNQLDK
>LBJ_0260 Transcriptional regulator, AcrR-family
MERLSSRERLIQTTAQLLQEKGYYGTGLKDILKLSGTPSGSLYHYFPDGK
EELTAAAIRSAGRRLEKQIETTIENHPDLYRALQEITSRLSQELIDSDFQ
KGCSSIYLKWQNLLSTFLQRSEMKEDQVKPVSILLLAVIEGALVLCRAHR
SIEPLEIVSKQLENILNILT
>LBJ_0265 Bi-functional protein, with a transcription regulator domain
MLEKELSPVFKALSDESRRRILDILKNKPGISVGELTDFFEFSRFAVMKH
LKVLLEANLLKIEKKGKFRNIYLNAIPIQMIYNRWISQYSKHWASSLTQL
KYEIEGESRIMEELKQVYTLYIKTNANKLWDTLIQSSITPEWFDGMAVTF
EPKVGAKLTYDIKGQDGNKLSVVEGNVLEFDPQKKLAYTFRLSAEPKATK
DRASRVTYELEPSGPDSVKLTVTHDDFDGKTTTFFGVSQGWPRHLSNLKT
YLETGKGMNLPSMH
>LBJ_1723 Transcriptional regulator
MTSRFTVAIHILSLLSLGEGKTKTSEELAESVNTNPVVIRKILSLLKNRG
IVRNQMGPNGGYVLAKTPSAINLKEIYVAIDEKIFQMHSKSPNKKCICGH
AIQPILSKVYEKAQKVLEDELGSTNLDLIAREILSFSKK
>LBJ_0549 Transcriptional regulator, AcrR-family
MKTRPNKKKESGTGVRERILDTVTSLFYKQGFSNTGMRQIIQESNSVAAS
LYDHYPSKKELGLAYLSRQEEKTLSDLQDLMDRYPDLGEFLRAWVILKEK
QIRHGEFVGCPFAGFASQVMDSDPEYTEFLKDIVTKWTRIISDYLQKAIG
SGQLKRNMDIQYVARRILMAYHGSVTMWRMTKELRFIREMDHSLREIVEE
YRIF
>LBJ_2062 Hypothetical protein
MKSFRSHLKTKIKNEKFKEKFQEEKELINLSLELHDLREKKGLSQSELAK
MAHVTQQQLSKIENGVNCNLATFLKVCHALDLEVKVKSRKNIVRALLSES
YDSKVLGQVLRELSNKVQNPFR
>LBJ_4013 two component regulatory system response regulator
MRAKLLLVEDDRSLGETLQERLQKEGYEVFWTVSAIFAKKLVKDEKPHLI
LLDVRLPDGDGFTLAEELKKTKDCPPFLFLTAQAGAPERLRGFELGAEEF
IPKPFHLKELLLRVKHVLESHKHSIEETRFFYKDYVLDFRGFQVRKGSEE
FPLSKRDCALLHFLVTERNRTISRAEILDKLWGEESFPTNRTIDNSIVRL
RHAFGKEGERVIRSVRGVGYQWTGEIKDAK
>LBJ_0099 Transcriptional regulator, AcrR-family
MQIVNREKNADPLNPRKEPSRKRSINRVQRILDVVVGLLEKNGVEAITTN
MIAAEASIPIGSLYQYFPNKHAVLNAVGQRHLERINSMLSEIFQSDLTGK
SWEDLVDLVIDSFANFYLTEPGFAPLWSSMKQDFKLQENNLKISENVSTI
LSQFNVNLAENRIISKIIVEVTDAILNLWIREQNNHRIKDHFKILSDSIL
PRRTKLP
>LBJ_2957 Transcriptional regulator, marR family
MSTKDLFLENQICFPLYACSRALTSLYRPILDQLGLTYPQYLVLLVLWKG
DGCSVKEIGRKLYLDSGTLTPLLKRLEDSELVVRKRSEKDERSVRIFLSL
KGKKLKERAVGIPSKLLEILEVDKKSLIDLKNSLDRLWLILSEKTE
>LBJ_1805 Transcriptional regulator
MKNHIYMLRKKRGIKQYDMARALGVSPSYLSKIETGSQDPTEKFKQSCVK
YLKTTLERLFNEQPVEDVYPEFTEGLTNRLWAKRRELGIKQYDMAKKLKV
STPFLSKVELGLLEPPEDFKNMASKALKMKKEELFLQKVEY
>LBJ_0189 RNA polymerase sigma subunit
MRENTPIVCNQEDWDCIQKVLHGDFNSFEILMNRYQGLIYSQAIKAFRNE
TEAEDFTQDIFLKAFESLSTFQGRSQFSTWLFVIARNEIIRRYRREHPEI
SGLDTLLLTESEVEKKNETSSEQETKLLKQEISEKIRSLVESLPELYRKP
IMLHYFENMSYKEISQKLNLKMNTLKSYIFRGKEIMRDWLNKEENEKQE
>LBJ_1888 Sigma factor PP2C-like phosphatase
MNLTDYIKSYFQRVGWLLLSINLICLTIAIGFLQTQPFSPKVRIVLYLFI
LIFIYLVNYVSFILFSTEKILPKEKIQETTTKRYRKGDYRMQNYLFPVPI
DDENYEIYGRTLTYNPIGGDFYNFLTDAQENYWIGIGDSVGHGYQAGIFS
MMIFQKMALLVKHDSDPYRVIEDINEDLLKRTEQNPTINSSLYATFLLIK
ADKQGNVEHSGLHPSFVIYKKRTGENRIVETDGKFISTTMNACLKNVQSK
NCFHLESGDIVFCFTDGLYEQKNNGNLYFGESLFRFLEGVPKNHLGKIAD
DLFTEILKHTNGRIQDDMTILMIRKK
>LBJ_1620 RNA polymerase sigma subunit
MSKKYEKYNQQDETELWKSYRDTKDQDIRSYLVEKYSPLVKHVAGRIAIG
MPQNVEFDDLVSYGVFGLLDAIEKFDPDRLIKFKTYAMTRIRGSIFDELR
SIDWIPRSIRQKAKQLEQIIGMLENKEGQQVDDDAIAKELGISMEEYNSL
LTKISGTSLVSLNDIWFLGDENDEVSFMETLESPMNMNPDTIIEKEEIKN
VIVEAIKTLPEKEKKVIVLYYYEDLTLKEIGEVLEVTESRISQLHTRAVS
RLRSKLGKVKSVISRK
>LBJ_1688 Serine phosphatase sigma subunit regulator
MDGSRQSEQKGHGDPRYSILFEIDSIIFLDGNFRVILANSATEKTFGYLS
SELIGNSIEHLFSLRIRKRFYRILKNIAELPDKRSQKPFGPIRMIRKDKT
VLISEISVSVTGPEEDYQYHVIIRNISEKHRILMDLKRANESLRKMDREK
EELLEKLEEKVRQRSRLLAGYYKGMKEELNLAKKLQTEILPDIPSVAGIQ
IHSMYLPMMEVGGDLYDLFQIRPGALRVFLADATGHGIQAALLTMTLKGI
LESIKKKDTDPGTILTEFKHEYCRNFGNIGMFFSCFLADIDTVSKKISYA
SGGHSTQFFLSKDLVLGLDRTGSLLGLDSNNRYGVFKFSYQYGDRLFLFT
DGIYEEFNSDKQQFGELAVQNILAKKFSEPMEETIPAILQSLIEHLGSQK
IQDDITAILLALNFPDL
>LBJ_0436 Transcriptional regulator
MEETYNGKILISNSSIVMDYFNQTVILMVEHDNQGAFGLVLNKKQKAFIG
DVIQGIPDHVSHTLPIYSGGPVDPTFISVLHEDKKISQPGIEVIPGLYLA
RSYDTLLELLKSTSKFHVYQGYSGWSAGQLETEMNRKSWVVHEATKDFVL
NQDPETTWQEALKSKGGIYKYFVEHTKDPMLN
>LBJ_2555 Transcriptional regulator, AcrR-family
MFRKDGSPLYPLNRDYKNSRERILEGAAIAFSRSGFHGTSLREISKECGL
EQPSIYHHFHSKENLFRKTLIATHLLVLNEIRRRVIRDQGLHVEVVSIFK
AVAETAKIYPDKTRLPFSLIYSAPVNLQNEYTERYGNQYRKLLEAAFERN
DRIGRKEEKLSLCVDLLYSLILACSVEVLYLDRVSGLEDRVRLILEF
>LBJ_0997 Acetyltransferase
MPKSKTNSGKFQIANLLPEHREAAIELVNQFFRLVNSLTLDGVFRIRPRA
GTKMIDVYLKLRGTGKVLLLGGFLGEELVSLLIARTEDKPYLEEQKILFI
DLAVTKRGKQKTGYMKPLVLACESWAKDQSFQSIELRAIIENENAISFWK
AMGYQPFYIRFRKSV
>LBJ_1965 Sensor protein of a two-component response regulator
MRTILLTEDEPGIRDTIRVVLESEGFKMISAMTGKECLSLLKESPDLLVL
DVGLPDGNGFEILKELRKKNSIPVILLTARESELDRVLGLELGADDYMVK
PFSPRELVARIKAVLRRYDGSSEKKRTEFLTDEDRKIIYYYGKSLTLTPY
EYKTLLLFLKRPGKIFTREEIMDSVWTEPEESFDRAVDTVIKNIRSRLKE
IRPDTDPIETRRAQGYGLKEIV
>LBJ_2951 Transcriptional regulator, AraC family
MYKNSNFKTFILIFGISFSSIFAHTEPVVLLDQDTSSKNISSLIEYRYRD
QKFAGCSPNHIDGLEDLEWHSISADVLRVKRTSFGNWLRFSVQNSEPTIQ
NRILLLGWLNVPDTQLCFFDKNGKFVSVKSGYSNPTTDEKILTTLPHFKI
DLQPNENRIFYLFVLSNEDINYRIRIMGLEEFELHKRLKFITSYSIVGII
GFAVLYSFFGYYRFKNSTFIFFPLYVFSVILTFYFLHGRTFAEVFGNTNN
LFRHSYFLFLGTSYVFLFLYLFAIDKANQKKVYRSVFFWIAGAFGILYSL
IPLLQSWYDHRILLLVATVGLSFFYFIRVHYQFFSSNSSIGLLYTTSWAI
FLVLDTYKTIFHFDFYPFNYFSVFGVVLFFPFHSILVSFSLNEFFNRRKN
QEIVGKEFAQARKSITSSLNVNEVVQNIKDLLEKKKVFLQKSLKEENIAK
ELGLNLHQLSEIVNVEFGNNFPSLINQYRIEEAKKLLLDHPEKTTSEIGS
RAGFSSKSTFYMEFKKFTGTNPNAYRRKKLKSAAAFNKNI
>LBJ_1299 Transcriptional regulator, ArsR family
MSKEKSALKKNQLESAIRGIKGIAHPDRLQILFFLSQKEHSVGELVDLLG
ISQSAASQHLSKMKINGILSSRKESNQVFYYLKDGKYKDLIRTIIKIYG
>LBJ_2322 Transcriptional regulator, AcrR-family
MEQDEVKHRIMDKALELFLKYGYAKTKMEEIARILKISRKTLYKHFENKN
HLLFEILSHKHNLMNTKLGQISEDDSLPVHEKIQAINEFKISQFPAGANE
LIMEIRDQAPDHYAYIKKVKMESVSKTVQALVEQGIERGEIRKDLDPTIF
AALLNSAIEITATPELLLNSSYSMMQLQGEIHEILFYGIMNSPEAVERS
>LBJ_1545 Transcriptional regulator, HTH domain
MFKSLHSREAKIFCKNLIAARKSADLTQLEIAKRLGEPQSYISKIESGER
RLDVIEFWRIYKILGKSFEFYFQFDEKPEGSEKRSKTLKAASGKRKKKRS
KF
>LBJ_4205 RNA polymerase sigma subunit
MTSRKDFMDALYREYSGRIFDFLYKYSSGNPEVAMDLMQDTFLNFFRKYS
DSNVDREQAIRLLYTIARNRSINYSQQFSTVKENGNSEMEDFQEQKLSFV
RKAELKDLEERLLICLDELEENEKYALILRFMEDYSLATIAEIMNISVST
VSRLIVKATAKVTEIAEKKNLKP
>LBJ_2791 Transcriptional regulator
MAAKKKNSEIEHKVGDYVVYPIHGVGEILEISKKNILGKKKDCYVLEIQG
SKMKVMIPVDKAEQVRIRPIIDKKEIKKVIALLKKDEVDTEEDWKIRYQN
NLNKIKSGSIYEVGEVCRNLFRRASGKELSIMERKLYESAYNLVKMEVAL
SKGVTQEEAGNLVSDVLASTLAPSEKKAEED
>LBJ_2849 Acetyltransferase
MKPTVAEITENYVKLHKALSKLIKASIFNYKSFDFYSNPDSHWFTRAILK
GNPSLSDLSSEIEDLRNKGFHPNILDFLNTITHEISIRELGYNSRNEQVG
MFLKGDPISFNKKSNMELDIRKIRTKKDLKVWLGILNDSFRSDDRENLYL
KLLNQNSFRLYGGFINGQMTTTGMTFYDGKSFGLYSITTDRDHRGFGHAS
ALIEHILGEIRKKFPGFIILHATEMGKGIYEKFGFEKSTLLRHWSIY
>LBJ_1391 Transcriptional regulator, AcrR-family
MPKIVNHEKYKTEILSKCVDILARRGYSAVSMREIATELDVSTGALYHYF
ATKEDIFKELVKFLLNKDVEEIQLYSKGNLGQALESKVESLFQMIQDRET
YFQNLLYIICDASRLKNHEEEKSLIADAMKEYVNIISKHFGITNPGLSRI
LISMILGTVIQRIVDEDGVNLSDSSEIMKDFLSILLSNSFTF
>LBJ_0047 RNA polymerase sigma subunit
MVILNDQPQEKIKPDWPDLIRRSFAGNREVLDQLLASLQPFVFNLAQKML
LNPDDAADATQEILLKVVLGLQTYDANKAKFTTWAYAIARNQLLKFRTGK
IEALTGSFDQFAEEIHAVADEVIEARELQNPETQLLVKEANVGCMLGMLL
CLTREQQMVFILGEFFSLKSDVAGEICGVSSENYRQQLSRARKDLYSFMH
NKCGLVNKANPCRCHRKTRGFIKAGYVDPQNIRFAAHHYKNARIFSEEHA
DAMCDLDDEYGQLFRRLPAYDAGRALLTVQNLLNNEQFKDTFKV
>LBJ_0275 Transcriptional regulator, AcrR-family
MRSGGDTKEKIVTIARDYFQSVGFQSFSFQDIANDLGIKKASIHYYYPSK
EKLGLEILEAYDKDFKKYIENIRERSPRVRLFGLFKLYVSYAGENGNICP
FGVVGTEYHVLSQTIRDKTLILQNQHRDFLIQTLYDGVKDGSFVLTLSIR
DTADLFISAIQGAMQISRIRKDKEYFPKMIQSLKSMIQMKEHKNAGF
>LBJ_2583 Transcriptional regulator
MNPSTVRLNFKLNLIRHLRDGKRMTLEELASITGINNRKDLKEQLGELFF
LGATPHIADLIQVDYDSETDTFGLILPFRFDSSLRLSIREWLTLRKILEE
ITETSSDPQTNSTARKILQKIVSIVPVAGQEALSSYKADIQEAIRNEKSI
DLEYQSRTGEKPTRRKVDPWFLFHSLEDYLLGYCHERNAPRNFRLDNILF
LKVGSDPISQPAGRKKSEYIREFEEFRKNRENSSGIAEIWHTKEVFYNLN
RKLGLERTDETKKSNHVVYHLSKAKIREENWFLETLLPFGKNVVLKSPTH
LVKRILGEIELILR
>LBJ_0766 Receiver component of a two-component response regulator
MIHSKISQKTKPPYLVSIIEDNRHTALNLQELLSNSSDFQFLRHYPDSQK
AIEDIPENIPDIVILDIGLPGKNGLECLKELKEKTPNTKYVIFTVFEDEE
KIVEAIQGGVSGYLLKDTPPELFLAELKVIILGGASLTPRIADKIIREFT
KKEENQNPPIQNTLGLTKRQLQILNFVALGMTVADIADELDISSHTVSRH
IEKIYKKMEVHSKSEAIIRGRRMGIIRDVPGYP
>LBJ_0212 Response regulator
MKLLILDSGTTFRKIISSFFPAEDFQIVEAGSAKEGLDLTFRENFDLITI
GMILPDSDGFTICKTIRNDLRENKYNACKNSKIYLVTSGDVESNRTKSME
FGFDGIFPKPSGIEELKLVIKEIIKFSYQKNSIEQRKVGKILIVDDSELN
LLLLGKILERNGYSFQAFTEGKKAYEYLQTSGENISYILTDWIMPGFSGQ
ELVETIRKQEKFDKIPITVITGLEENVGLNISVSQKNVSILQKPYFERKI
LEYIRKV
>LBJ_4239 Transcriptional regulator, AcrR-family
MKSSRSKSNNPQMKDNFVSEVTIRKRNRAATETSILLAAIQVFAKKGYDA
ANTKDIAKLANANEALIFRYFGNKKGLLEAILTRSEDIKQENSLSSRVRK
TSKNYQDLEASIRYLISGKCKDFKDAEDFMKVAVSQIILDPEVSQIIQKK
IYTKALPEFITELEKFKKAGKINPKADLKSAAYAISSFAFALGFMGQCVY
KIPPSEIQATIKEVARIFRKGLEPGPTKKKSK
>LBJ_0307 Serine/threonine kinase with GAF domain
MKLQLHGFKTLGYFSVDHQFLIYRSLDQRSGKRVLLKLLRQKKPTIKDIQ
KVYHDFRISNFVKGLRIQNSLELIRHEGIPILVIEDCDSVPLSRLFPNGV
NSIEKFFEIAMGISLALKEIHEKKILHQALRPDNIWVQAKTGIVKITDFS
SATFSDKEISISITPDLPVEILSYISPELTGRLSRIPSFRTDFYSLGVVF
YQMITGILPFISRNGNEILHAHLARKPTPVHIIRKELPITISLVISKLLK
KDPDQRYASIDGLIYDLKLCLQNFQKRGIDSTFIPGSRDIPELIFDSSIL
HGRDKEKAVLESSFNKVLQGDTELVFITGDSGCGKSALAKIFLKSISERG
GIIIQGKFDQYERSIPFGGLMHSLRDLVPILLSKEEKEIRKLKRLINQYI
GDNGKILLDQLPELEFILGPQPELSELPPDENRNRFYYTFHNFIRTLSEM
SRPLVLYMDDLQWADPASLNLIETFFIHSKIKNFLCILSFRPEAVESPNP
FSGILKSIETNKIQKSLITIDSLDKKSVYRLIQDLVPSPEEQIRSVASIL
HKKTLGNPLAIIQLLRTCKKTNIISYEFESQLWKWDLEKVDSLSAADNVV
DFLCDRIKELTPEIQELLGICSCLGEQFTLEFISKLSFFDIPKLNQTLWE
AVKEGLLVPFHNQNQSIFEKSLSSERTFGFSHDRVRQAAYSLLKESKRKK
FHKQAGLTLLAIHGPQPKNRILFEITNHLNQALDQIEEETLRNNLTILNY
KTGLQAKSLGSYESSLQYLNSALKNQEICIKDLEFYSNVILETAETEYLL
NNYERAISLLGLLENLSISNLQYIRANMIRVRLYSKMNKVEKAVSAGLCA
MKRCKIHIPSSRFKINLALFKELFLSLILSKGKSDFELAHLKENSEPEYQ
ALIDLFADLGPSAFTYNQNLFVLLALKIFNISLTKGISRSSPIAYSGYGM
IVNQILKDPNQGIRYSKIAMDLNERIPFDLVKWKVQYVYSAYLCHWKKHI
TPDIKLLDEVHKGALQNGDILYAGFSLQAKIQKKIFSSYPIEELLIHADF
AERYFRTARDNFAFTIAKSSHQLLKALAGKTSSPNSLNDSEFQTENFERK
ILRDKNYTALFYYYHDLTKLHYFSGQFSKALSYGQKGEDLIQNAFGLIPF
AEFWFYYGLTILANFEEFPFSYRIIYSKKLNLIFSYFTQWSKNCPENFMG
LLELLHAERERVRKKTSEAITGYEKAIKLFQEAGFVSFQALSSEIAARFH
YKIGNFSLGNHYIRLAINFYSEWGASAKVIDLKNRFAKRLNPTFYHETTQ
KKLNNPNTSLDQEVVLKTYNVLSEEIVLDNLLKKLIQIAIETAGATRAIY
FHLHNKNLTVYLTGQSGETEIIVENFPEIDETQYPVSYLNYVFRTHRIIS
TRELDSSLIKDFTDPYIKEKKPQSMICIPLLHTGELKGILYLENQLVKGV
FTENNIQTLKLIAGQAAILIENANLYAELETKVEKRTAELNNTINLLQKD
LLYAQKIQDKILPKPEATLDKIYILTKYVPMTQVGGDIYDYAEISPGKVR
IFLADATGHGVQAALVTMLIKSEYESLKYLDLPPGKIISELNQEIIAKYK
TLKSFFSCLVADIDVEQGILSYSAAGHPDQFYLSGNTIIRLPRSGPIIGI
LENTKYNSQFLEISKGNKLFFFSDGMTEEFNPFHEEFGDRRLSESILKQA
SKPVSEIVQFVFEDLQSFLSGQKIQDDITFLSVEIL
>LBJ_1691 RNA binding protein
MKISVGNLPQELTEDELKKIFSEFGTVQEVHIKKDKTTGRSLSYGSVEMD
DSAGTQAIAALNKKEIQGKQIAVIDSEELKREFEKKQSVKGGGASGKIHG
NQSKFGGFSGAGVRRTGGRGK
>LBJ_2576 Superfamily II DNA and RNA helicase
MKFEELSLHPKLLSAIQEIGYTELTPIQEKSIPHGLEGKDIIGLAQTGTG
KTVAFLIPVVHTILTKNIQKVSALVLAPTRELTIQIADEAKKLLKHSDGI
RAVPIIGGTDYKSQNKDLEGLNGIIVATPGRLIDMVKSGSIDISNVEFFV
LDEADRMLDMGFIQDIRWLLHKCKNRKQTLLFSATLSVEVMRLAYRFLNE
PVEIQINPEKIITERIDQKIVHLGREEKIPYMTNLIVNSKDEGQGIIFTN
YKANIPKIVYTLRKYGIPITGISSELDQKKRLRLLRDFKSGKYRYMVATD
VASRGIDVENIDIVYNYDLPQDTENYVHRIGRTARAGRMGKAIGFCSESD
YVELEKIEKYLKQKIEILEVNEEYIQFPTGKFPPFIGGDSYDREKEVHFK
QNGRRPHDRGDRAPHKHDRDRRGDKRHTSHIHSHSPTRDSHKKKPAAAIQ
EAEFFLQKADSVLSAELKGSKSENKNQHRFQGNKGKQRQQQGGGQQLHKQ
QNRNQNKQHVNQNYDKSKRNLFDINDTVREDTKKKKGSIWQKIKSIFGR
>LBJ_4095 Serine phosphatase RsbU, regulator of sigma subunit
MSERQLSLSLISNITAKINSTDNLEELLNIIIETTKDVLNTEGCSLLLYD
RNEDCLVFNIAKGTKEKSLTELKVPRGKGIAGMVLETLEPVIVNDAKNDP
RIYRNIDETVGFVTYNLICVPMSTQGEIQGVLEAVNSLERKEFTNKDIKI
LQYLSDLAAIAIRNRRLIRDLKSRANELDCLFQLSQAISNISEMDQFFNL
TVNSVSEIMGAERVSLIFFNPKNGKYELKKSIGFSLKEEEHFINEKEGVI
RKVIETGKPILVQNTSSIMEDCVRPERYKTKSFISVPIRQDGKIIGILNS
ADKKSGNNFDNADQNVLSTISNQIAEAYNSLLSKEQKEKLNSIHRDMQIA
SQIQVNSLPNIPKKIQGLELETSYIASKEIGGDFYDLIYHNPDEVSVLIA
DVSGKGIAAALFMEFSKTIIAGEVSRNSSTSISLMSANRIIQEKSGYFMF
VTVMLARINMAKRKICYSSAGHNEQLLYKAKEKNVVSLSGKGMPLGIKES
EIDEHELDYYPGDLLILYTDGVSEAMNESNEMYGLENLTKLIERNGDMPL
GALKELIIDTTDAFRGDADPHDDYTLFMIRLP
>LBJ_0705 greA, greA transcription elongation factor-related protein
MSNEISATTESRPASDLDKLTSLFNEEIYVRTDASSIPASKFKIFDDLIE
FYKSAGKIDEAKRKIEEYLSEHEDSISARYLLGILSLERGEISDSGLLKN
LLESFKVAGKWAIIEHITDQILKYGDQRLALKYKAEALEKLKKNKELKVV
LEKLAKHDRKNPEILKKYALSILEENKERAITYLKQAIETFAKTKDYVQL
EEIWSIIVSNNHEDLQFFERIERIMLGHRERTRLVGYLYPIVEPYKQLED
WDKVIYLLKKILEHEASSNKARNELIRAYKAKYANHSLLEDFLKMSEIGN
NRKPIKVCIANFERNIVFDTNNYVLHRNWGVGKITSISPNGDSIFVDFKD
KKDHKLSIQMAITSLKPLKKDHIWVKYYENKEEIVDLFQNNIPDFFKELL
TSFNNRMLTADIKSEVAGKFLPALEWSKWWNKAKNIIKKEPNIGFDPKKK
DELVYREKAISLSEELSEKFTHQTDANKKLDIAMEALDNREDAEGAIEAF
NHFYYEEEEAADPVRKIVAFLYLQAASEELGDEEIPRHLSEQKIAELIKS
LPVNNLTEISTKIGNVEIKKSYVNLIRKHAHNPEEVLVGILFEVPIKVNK
YVFSILEEEGKFDLLNSFIKSAGTRAKEAPEVFIWVAKSILTKTWEGEWL
VSSRSEERLELILKVFRLFKPLAKIEDKGTKLKNACKEILHGNDDEVLRE
AIHSGDSEYIRKLYALYKEVPYFTDLEKERLYSLIVELKPDVAWDEDEDE
DEEGDDDILNRIPEGAILVTRRALNRKKEEFEHLLNVEMPENSKDIGEAQ
ERGDLRENAEYKAAMERQVQLQAAIKRLEAEIKSAIILDLTNVKTDKINI
GVTAKLKNESTGEVVAYSILGAWDADTEKHIISYQSPLAKSLLGKKVGDA
AVLNLTGAETRYTVLEIGRFSLQTQED
>LBJ_0431 hrcA, Heat-inducible transcriptional repressor, HrcA
MDLTERHKRILKALVDEFIQENRPVGSKTLFDKHDIGLSPASIRTVLKDL
EDYGYLASKHTSGGRIPTERGYRFYVDSLVILYELTLKEKQRIQQEYLKM
QFKLDQILKATASVLSSLSNAAGIVIGPAKNLDTLKHLELIHVRGDEILM
ILVMRSGTVLHRNIFVDRNYSQEALYQVSKYLNDNLKGYDIYEIQNVVVP
NLMVRRDGPEDFTRIAELLSSAMNPDNSEVTLYIDGFKNLYANFRDEEQQ
LSQVLSLLDDQGFLKEFFSEYIDQDGVYTIIGKDGNRSMSGVSIITSNYK
MGEKKIGALGIIGPQRMDYNRALPLVDFTSKLVSEMVTRISK
>LBJ_1985 lexA, Repressor lexA
MKDLTDKQQAVLAFITTIIKERGFPPTIREIGDEFGITAKGAYDHLKAIE
KKGYLKTAKNQSRAIELIRQSPMESIPVQATSIPVIGRVAAGLPIFADEN
IESYIPVPDEMAKGNVPMYALRVQGDSMIEVGIDSGDIAIIEKRDIARNG
EIVVALIEDEATLKVYYKEQDQIRLEARNPKYKPIKTKKATVIGKLVGLY
RIY
>LBJ_0498 marR, Transcriptional regulator (MarR family)
MSPRLIIYMISRIRDEFHKHLNLELKEKGLSPLTTTHADILFALVKKKKA
QMQEIAKMINRDKSTLTALVDKLEVLGFVSRTKDSEDQRIVHLELTPKAS
SIRPVLLGISRSLVNNLYRGFTEDEKKELVRLLMKLYQNQNRESATAIEL
LQ
>LBJ_1666 mfd, Transcription-repair coupling factor
MKDLLRIIGEGLFARFEFSFPAKKNPARKVKAAAAPERETDLFSVDQYPS
VNLSITGNVYSVTEGSHSILASSLFQKLNRTIVVVSENNTAAEFLFREAL
SFISASDLVYLPGQEVLPYEYLRYPSEMKRERIKAIGKILNGGPSLIFTS
VAGFLKTLPPVQTMQGRAITLEKGKEIDLESLLIQLIDLGYKRTDVCETF
GEFSLKGGILDIYSSYSQEPVRIDLFGEEIESIRTFDPDTQRSMVDLNRA
VLLPVDEYILSDEQKKEYQNILKYYSSSLHIPEIPEAGYGIYYEELVPLV
RENHGILSYFSEPPILLFPSPNSVNQRILHLEREYLSLFEKRSQEVLCAP
PDKLLSFGEEFRVLSELVGLSFVGLPPRNGSDLVSCLKEAPAFKGKIREV
REKISELRAEGGWKIVLTSSFEAQTKRLQGLFEKEGIVLLNEGATEPIPF
HLGKHKSDAFLVLSELRNGFIFENQKILILSENDIFGREYKRKTRFKKQN
SKALQSFIDLKEGDPVVHIHHGVGRFLKIERTNAGGKERDFLKLEYAGGD
SLFVPLDQISLIQRYIGGTESPRLDSLGKNTWKKTKDRVQKAVETLAEDL
VQMYSNRLKLQGYAFPPDTIYQEEFEAEFEYEETPDQIEAIEAVKKDLES
SVPMDRLVCGDVGYGKTEVAIRAAFKVAMAGRQIMMLAPTTILALQHYNT
FKNRFRNYPLRVELVSRFKTSAEIREILSDFSLGKIDMIIGTHAILSSKL
KPKNLGLLIIDEEQRFGVNHKEAIKRFKNLVDVLTLTATPIPRTLHMALT
GIRELSIIATPPKNRQSVETYVLEEDEDLIAEAIRNEIQRDGQVFYLYNR
VETIEQETKYLGEIVPEVSIGILHGQMTEDEIEETLLDFYNRKYDILVTT
TIIESGIDMPNVNTLFVKRADLFGLSQLYQIRGRVGRSDRKAFAYLLLPK
DRVVTEQAEKRLNTIYEYQELGSGFKVAMRDLEIRGAGNLLGKEQSGDIM
EVGFDLYVRMLEEAIARIKGEEVVVEVRTSVTLNTNFFIPETYISDTRQK
IEFYKKFEGARDLQEIDEVYREMVERFGDPPEDARTFILLEKIRTLASNL
GFESVTETKDEIKLKSGSYFKGDHSKIIQLISAGTGLTLNPREPNVLIFQ
IGKTSEKEKLDTLIFLLSEMLPSKKL
>LBJ_0945 nusA, Transcription elongation factor
MAVKKTQSEGNLLEVIQQFCADKSLDREAVMGVIRDSLITAYKKKSGLEG
LEEFEESEKPSPVTVEFASGKDSVVIAIAKKVVEGTPSSALEIGLEDAKA
IDASAEIGSVISFREKPVELSRIISSQAKQMVFQRLKDMEKELLYNEYKA
KEGELTHGYFQRWKKDAMSIDLGKVEGIMPRREQNPGEKYHSGDRLKAII
QRVELRPREPIPVITLSRASADFVRKLFEMEIPEIYDGLVEIINVARQPS
IRTKVVVRATRGEIDPVGACVGMKGVRIQSIVRELGNERIDIVEASDDAS
EFIANAISPAKPVEVKVDGSGREAMVVVPDDQLSLAIGINGSNVKLASQL
AGYKIDIKTVAQYNAELASPEARERLERLFYSPAEEAKVAAPQEEEELTP
LEDLPGLSARIVGILKSEGIKDLETLIEYSQDDLAKLQGIGHTTAGQILK
LLRESVEWVEDN
>LBJ_2505 nusB, Transcription antitermination protein
MSARRTSREIAVMALYQLELTGPPLKEVLKFKWYDKKTEPEERDFAVSIV
NGVVKNQEQIDTLIKKYSKNWDFSRISIVNKAILRLSVFALLYSWEVPKN
VTIDEAVELTKEFESEESARFVNGILDAILKNETKSDG
>LBJ_2370 nusG, Transcription antiterminator
MGTKKWYALQTYSGHENKVQKNIEKLVQQKKLEEKIFQVKIPTMDVAEMK
NGKKKVTKRKLMPGYVLIEMEMDDDTRFLIQSLPSVSTFVGSKDGGPEPL
SLEEVKNLFSESGDVASEEPVAPKILFKVGDSLKIIDGPFANFTGLVDEI
FPDKGRLRVKVEIFGRSTPVELDYLQVKTEN
>LBJ_0728 rho, Transcription termination factor Rho
MATVRRDNKNKHHNQNNNYSQNETTGSIEEESAGQESQDLESSDNADHRS
RKRKRGGYEGPTPAPIDLVELKKKAIADLIEAAKGLGVENTSGLKKQNLI
FAILQAQAERDGQVHAAGVMEKLPDGYGFLRSPDYNYVPGPDDIYVSPSQ
IKLFGLRTGDTVEGQIRPPKESERFFAMLRVETVNGYTPDVAGKRALFDN
LTPLYPNERLKMEYDPSMLDTRILDLMCPIGKGQRALIVAPPRTGKTILM
QNIANAITSNHPECTLIVLLIDERPEEVTDMARHVRGEVVSSTFDEPAQR
HVQVAEMVIEKAKRLVEHGKDVVILLDSITRLARAYNQVIPTSGKILSGG
VDSNALHKPKRFFGAARNIEEGGSLTIIATALIDTGSKMDEVIFEEFKGT
GNMEIHLDRKLSDKRIFPAIDINKSGTRKEELLITKDVLQKVFVLRKVLS
PMSITESMELLLEKMRLSKTNDAFLASMNTQ
>LBJ_2111 rnc, Ribonuclease III
MVFKKTQPSPSLKNPERIQSFKKLSKKIGIKFSKIEYYNTAFIHSSYKNE
NPEILEDNERLEFLGDSVLGLVAARSLFQKYPKASEGELSRIKSKIVSTP
ILNSIAEKLNLGEYLLLGKGEKNSQGKGRRKIAANLFESLVGAIYLDRGF
EVAEKFIVQHLLEFAENPDMEESVRDYKTQLQEYSQKHFKTLPVYRMKGE
SGPDHSKTFQVSVRIRDQWEASGYGASKKIAEQNAAKELYIRIRRGF
>LBJ_2632 rpoA, DNA-directed RNA polymerase, alpha subunit
MSLKSLLKGFKRPKKIEFNTEASTPNYGKFVAEPFERGFATTIGNSLRRT
LMSSIEGAAISAIRIEGVNHEFSFIEGVAEDVTRIILNLKQVRIKYEPEE
KDQSKIIHLELKGAGYFRAGDLAVDSSIEIMNPDLHIATLNEDANLVMDL
EIQRGRGYVPAEEKKKDIEVLGTIPVDSIFSPVQKVVFEVSETRVAQRSD
YEKLTLEVWTDGSVSPDDAVAQAAKILKEHLTVFINFEEELEEEDDELDE
ADEKLKASLSKHVEELELSVRSLNVLRSLEIDFIGDLVKRSEEEMSKSKH
YSDQCLQELKGKLSTLGLSFGMRDF
>LBJ_2365 rpoB, DNA-directed RNA polymerase, beta subunit
MYGQVERKRVNFGKITNLDYLPNLIQIQKRSFDWFLQADVKDETKRKHQG
LEAVFRETFPIESPNNDMIMEYSHYILGEPKRSPQECKDTDATFAMPLKA
VIRLIIKETGEIREQTVYMGDLPVMTEQGTFIINGAERVVVSQLHRSPGI
FFSYDMERDVFSARVIPYRGSWLEFEMDNKGILIAKIDRKKKFPATLLIK
SLGHGTNEEVLRLFYSSKKEKIAGATSKDLKKILGRRTINDIINMETGEV
MLEAGSKVNEDNISILKEMKVKEVELIEFPKGKDNPILINALEKDGVNDY
EDAILKFHSLMRQGEPSTIENATTELTRLFFSPKTFDLGEVGRYKINSKF
EFNNPKEFSGEKARVLRPADIIETVRYILNLFSETENYYPDDIDHLGNRR
IRSVGELISNQLKTGFSRVERVIKERMTVQEIETQTPQLLISIKPITAVI
NEFFGSSQLSQFMDQTNPLAELTHKRRLNALGPGGLSRDRAGMEVRDVHY
SHYGRMCPIETPEGPNIGLILSMSSYARVNDYGFLETPYRTVKNGKVTGQ
IEHLTADKEEYHYIAQASGVIDEKGELKNKLISTRHRGDFPFRNPSEIQY
MDLAPLQVVSVSTALIPFLEHDDANRALMGSNMQRQAVPLLREEAPFVGT
GMETRAAYDSRICIVNKHDGVVTSVDAETIVVERKGGKESDTYSLTKFKK
TNQGTCFNQKPIVGVVHSEINGKVSKVSKEKIEVTGENGELKEYVLQIGS
KQYAPIVSSGEEVKRGTTLAGQVVVGEKLDEMGNILVKGTVLADGPAVDN
GVLALGRNVLAAFMPWEGYNFEDAILISERIVRDDVFSSIHIEEFEIQAR
ETKLGPEQITRDIPNLSDKAFRDLDETGVIRIGAEVKPGDILVGMVTPKG
ETDLTPEYKLLHSIFGEKAKDVRDSSLRMPNGFEGTVIDIKRFSRENQDE
LPAGVEEMVKVFVARKRKLLVGDKMAGRHGNKGVVARVMAEEDMPYMEDG
TPLDIVLNPLGVPSRMNLGQIFETQLGFAASKLGISFETPVFDGAEESDV
DNFCKEANLPLNSKFKLYDGRTGLPFMNEVFCGYIYILKLAHLVEDKIHA
RSTGPYSLVTQQPLGGKAQFGGQRLGEMEVWALEAYGASHTLQELLTIKS
DDMLGRARIYEAIVKGIHSIKPGIPESFNVLVQELRGLALDIIITDSEGN
TVDISDYEDEYSKSKKKIKFETIENA
>LBJ_2364 rpoC, DNA-directed RNA polymerase, beta subunit
MRSHNDFESITIRLASPERIKEWSYGEVKKPETINYRTLKPEKDGLFCEK
IFGTTKDWECYCGKFKSIRYKGVICDKCGVEVTHSKVRRERMGHIELAAP
VSHIWYYRSVPSRMGLLLDMTVNQLKSVLYFEKYVIIDPADSGRSRGELI
DEEEYHGYLDEYGDKFVAGIGADAIKELLARIDVDAEARMIRQKIQDKDK
ISDKRILKRLEVLEAFRDSGNRPEWMVLDIVPVIPPELRPMVQLEGGRFA
TSDLNDLYRRVINRNNRLKRLLALKAPEIIVRNEKRMLQEAVDALFDNSR
RKRAVKGKGNRPLKSISDMLKGKQGRFRQNLLGKRVDYSGRSVIVVGPEL
KYHEMGLPKKMALELFKPFIMKRLVDLDLAPNIKSAKKKVEAEDKEVFDV
LEYVVKEHPVMLNRAPTLHRLGIQAFLPVLVEGKAIKLHPLVCHAFNADF
DGDQMAIHVPLTPKAQLETWMLMLSPHNILNPANGHPICGPTQDIVLGIY
YLTSELPSEPGAPLKSFSNLDEVHYAIDRGVVEFRTKISVYHQGKILETT
PGRLIFNTILPEGYAYVNRPLSDKETNRIIADVYDKYGPAKTVLMLDDIK
KLGYRYATLFAPTISIEDIRVSPGKVGLVGDANKEVEKADSEYRKGIITN
EERRKKVIEIWTKTNDLITESMFKELEKDKGGFNPVFIMAASGARGSKQQ
IRQLAGMRGLMAKPSGEIIELAIRSNFREGLSVLEFFISTHGARKGLADT
ALKTADAGYLTRRLVDISQDVIISEDDCGTEESISLGIVKEGENVIVSLN
DRVFGRYTAEDVIDPVTDKVVYPRNTLITREVGQKVENLGYDKIRVRSPL
TCESKQGVCIRCYGMDMARLIPAEIGEAVGTIAAQSIGQPGTQLTMRTFH
IGGAASAKVQEKEHKVSYTGIVNNINGRLITNEKSQSVFSRRGSIVIQRL
IQQYKTEELSNLRVENGQKVDKGELVATSPSGENITSAMPGAVHIENGIF
RILGEEAVIPVKTGTVVNVKVNDITQPNQPLAEFDPYNEVGISEIDGTVQ
WMDLEIGKNVRRDEDLRTSNILLKVIEQRREKLNPRIAVISGGSREEYSV
PVDAIISVQDGDKVKAGDILFKIPTVAEKTRDITGGLPRVDELFEARRPK
DATTLAETDGKIEISGEIVKEKRVLYIHPDNPDQEKVKVTIPIGKQIRVR
NGDFVKRGDQIDDGNLDPHDILRVKGVTALQVYLVQEVQEVYRLQGVHIN
DKHIEVVVRQMLRKVLITDSGDTSFVNQQQIDRLMFNEENKRVIAEGGSP
AESVPILLGLTKASLNTESFFSAASFQETTKVLTDAAIKGKTDNLMGLKE
NVIIGHMIPAGTGTKKYKDISVFKSAYGDLDRPLEEEEEEEIPQSIADDS
DGDE
>LBJ_1376 rpoD, DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32)
MENLQSMPEVQKIISLGKANGEVSYDDINEILPDKILNSEKIDDFFTLLH
EMGIEIVEEYTRNTLEPASTLVPKDDSKPARKKKESSASASGSEDPIKLY
LREIGKVSLISGETEVFLAKRIEKGEKIIEETILSSSILRANYIKLLPKI
RSKKIKVYDLIRVDKMYALNAEEAHKLEELFFKNILVIQEQEKVLQEAVS
KIRKYSETSKKFKEFKEKIDASTEIIHNAIQELGVSQKEIQKISQKIKSM
VFRIKEIDRHFLKIKAQYGQDVRDIKAFNRFIEKNEKLDDIEVKMGVNID
EVREVIKDIRNNERKLRRMEQEAGSTVQEIKDWGEKIIKGEREISQAKKE
LVKANLRLVVSIAKRYANRGMHFFDLIQEGNIGLIKAVDKFEYKKGYKFS
TYATWWIRQAITRAISDQARTIRVPVHMIEQVNKVIRETRLFIQEFGRDP
NNEEIAERLGWPVQKVKMVKNVAREPISLEIPVGSEEDSELGDFIPDTEV
ETPVNTAASSILAEQIRQVLHTLPAREQKVIRMRFGLDDGYPQTLEEVGY
QFKVTRERIRQIEAKALRRLRHPSRSKKLKDYIDG
>LBJ_0518 rpoE-1, RNA polymerase sigma subunit
MSQNSESQIFDFDGLYSRNYEKIYRFLLSKGASKEEAEETCQETFIKVLN
NWDKFDPSKGNETSWMFTIAKNQFLDLVRKKGTSEKREVENSHKVLEFIS
KKEIEYEEDKHQLDLLNASLENLPHLEKNIIILRFLRNYTIKETAEKLGI
SARTVNRKTYVSLIFLRKKLQNSNFDFESI
>LBJ_0173 rpoE-2, RNA polymerase sigma subunit
MDQKEFTELINSTKHIVLSAIKKNLFDEFYDSIDDVVQETYFRAYKSLSA
NKFRGDSSVSTWLYTIARNESLRMNQKRSRQTALANKLKEKVTLDNSIQE
KEAVSIGFTDFELKDLLAVLPWKYKSVLSLVGEGYKEQQIAEKLSIPEGT
VKSRAFRGKQILKKFFVDK
>LBJ_1446 rpoN, DNA-directed RNA polymerase sigma-54 subunit
MNLSQSLVQKQTQKLVMTQDLRQSIELLPLSTLELSDRINSELVENPMLE
EEYVSERNKTPDLYSRDDLRRKEKNDFLKNSDVTWQDHFSLDKAGSFGSD
ASDRNQKYIESSPERSSLSEHLLWQLRLSSLKPEEISIGEMLISMLDDHG
FITIPISNLCKEMKLNEKKVRKILDQIQRLDPIGIGTKNVQETLLIQAQI
VKPEDQKLHTLIRDHIKDLEKLDYKSISKKMEISLETVESLASEIKKLEP
YPATLYTPNKPDYVIPDVIVREVEGEFDIYINDEWIPRLKINKEYKNILK
NAKESDKEYITSKLGSAEWLIRSVNQRRQTLFKVTSAIIEMQTEFFQKGI
QYIKPLTLKDIAEKLEMHESTISRITSNKYVQTSRGIMELKWFFSSGVRS
SEGGIESSKKIHDLIRNLVKEEQSDRPLSDQEIVEAIGKQGIEIARRTVA
KYRKILKILPSSQRKKVKSLESR
>LBJ_0248 rsbU-1, Serine phosphatase RsbU, regulator of sigma subunit
MQFSKIFFFLVGPFALIILVMISSPWRTGDGLKAYQGKIDLRGIPNPAGM
TKLNGEWEFNWLKESDENHSKGFIEVPGSWTNEFKNYRAYPKFGYATYGL
KVFLPEVWKKRILSISLGAIASAYQVKINGQIIGECGVPGIDADSTISRV
EPKEFLFFADQNEIQIEIFAANYSSTIPGVLLPISIGPSDSAGVSKAITL
FFDIFSFSSLLIMGIYHIFQYLYLRSSVSPLYFGMYSLVICLRSSLINSK
ILMLFFPQIPWPWINKLNHLTLSMGVPFFLLFFSSLFAPYVNRKLVNAGV
VFSILFSVVTLFGNMQFNNQNISIYHYFILITICYLFYAILKIDFDKERN
YAYILYGSGILFIAVLVDLFYVRILKTGSIQTSHYALVLFVFLQSLLLAS
ERSRKFAETRELALNLRTSNLELFEMKEQLVQKIEDRTRVLNDNIVQINR
ELEIAQNVQRKILTPLDRNISGIRFYYEYMPLEKVGGDFLDISEILPGKV
RVLIADAVGHGVQASLMTMALKTEYEELKNLENPAQILKELNSRFLKKFD
SLESIFPCMIGDIDTKKEEFTYASAGHPDQILQAPGEFPSLLQKTGPILG
LFESLEIVSKTVLFPTGSRLLLFSDGLIENRMKDSLNTKQHNMELITKAL
HEGKKSELNVLIQELIKIEELTRGENPRYDDITLIVVESYTVERS
>LBJ_0643 rsbU-2, Serine phosphatase RsbU, regulator of sigma subunit
MNPYILIPFSTLIINGFLFSYVSALKGKSETVTLYQRYSFLLFLWHVSII
LYWSFLPNNWPTIVFKASSFCWIFIGLLFFEFVVRFTNSSYRFTIYFFRG
FCLVSFLLTISTDLVITGTIRSYWGDMILAGPLYLPISNFVSVIPTLIGC
FILIRNGFRSSNPLLKQQSKLVAYGTILTFLFSFTTTLLPRYWSASLTFP
PLSGSATLIQSVCIFIAIHKYGFMALKLERIALRLYSEIREGLILLSSKG
TLLFSNLSARRMLHLPDSLNLGSNFDLRDYLENFPSDSFFKRKEFVNLSV
KTESSSLNSPEEFLQIIENKYLEVSSSPISLSGKNRDKIYILRDITEKKN
ALEKIRELLYRLDLDLDFARDIQQMITTRDFPASPDYKIHSHFQPYVKVG
GDILNVIKEKDESLHILFGDVSGHGISAAMVAAMISIAFNAATGRSGSTD
KNLLFIHELLKDTTTLHSLSSVYMRYVSSERKLEYSYGGHHAGLLIRNGI
CNPIEGSGEILFATLSPKIQRYELDLIKGDRVLFYSDGLFEVKNREGNIL
GKDHFLKAVGSLIVEDTNSMIRSILSYSDSYGEGEVSDDITIFCLEIL
>LBJ_0644 rsbU-3, Serine phosphatase RsbU, regulator of sigma subunit
MNYYLFFPMAAFVANTMFIAFVYARRTNNPIIRSYLLYTISLDAWLFTYA
FGWSFPPKPWMTWAFKILSITWLPLGTLYLEFVFTFLNRKPGIFLWLFRI
GIPISYLIILSTDWVIQGSIHYYWGNEGEPGPLYFFVIFNFVALPALIGL
GVLTQSFFASGKDQRKQTGLAILGSMFAIFLSFYSEIIQVDDQGRMLSMP
LTSIGIVIQSFLIFTAITRYGFLRINVEGLAADLFRDIHDGMILVRRDRS
LFFMNESAIRILGISNSPPSHFYPSDFLKGYRESPDHFSKEYEPIFNVDC
RGVELTRSHIELTGKESGYLYILRDISEKIESREKIERFYSDFNKDLEIA
KIAQTSAISTIFPESSKYKFYSHFQPFELVGGDFLRALERSDGKLDILFA
DVSGHGISSAMVAGMLSISFQLVIETNPTPKKALEKTQTLLLNAVLNHHV
SAIYLSFDPDTKTLEYSYAGHHPILIFREGEIIPLRGVGRILLITPDTEL
NNYTFQLKKGDILFLYSDCLFEVRSPEGEILGYENFMLKMNEISVYTPVN
ILKTCIGQALAFGNGKLTDDLTILILEIF
>LBJ_1820 rsbU-4, Serine phosphatase RsbU, regulator of sigma subunit
MISSKKQDSLLRQDSDGNLYLEDNPGLTVVFKSLLTELIRLTSAQFGIFG
FRLEDGTLKPICENLPSNMVKEARLVSEFCFRTGQDFNLKKGDSPSKLIP
SLEQNSICCVLHVGELGASSSEDQKKIFGTILIGRSEGGEFREPDLVHLK
TTARTISDLLEESFISGESSLVVLSLMTTSRVALESVQMRKQTDRFDFLL
TEIIRVSGLINKSLDLSQLLEAIMLSSKSVFRTEACSVLLLDDTKEYLYF
HTVLGEKRDEVTRIRVPVGKGVAGMVVRDKKPMIINDATNDPRVYREVDK
ASHFVTRNIMAAPLLVEGQVIGVIEAINTIDRTSFTEEDLELFSSFSGTS
ALAIQKTELLQNLEDANKDLRKKVSELESLFELSQVVSSAKSQADLMKYS
IPVIHNEMDAGKTGIFLINRKMGILTLIVCTSERAVEIFRTTNYHNSFIH
RSIEQETTTVKEDIQDFAFDHELDLEYLKGSYIVLPLTQQGRNAFGVITV
SDRVDKLSYNHSHLRLLQTFASLIARGHETLKLQNEMISRKATQRSLQRE
IEITREIQKNILPELKSFHSNFDIGVKSVPAKDVSGDFYDYYQYQDGQYS
FLVSDVSGKSLPAAIFMAMSSSVIRTLARNHDLDPEEILKQGNALIYEDS
HNGMFVTTFFIHYNPAIFTLDYASAGHNEQVLIRKDNSWEFLKASGPPLG
VIPSANYKGGSLIVEPGDMVILYTDGAIEEKNARDEEFGLERMIREIIAR
KHLPAGQIVEELFGLVRKFSGASELFDDFTVMILKFNDNYQFSRTFEANI
SSIPLFREFVYETIKVRNLEESQRDDILLACDEAGTNIVMHSYENTSLKN
PEFECKIRFTGDWITIVLIDSGKTFQRKEVQKPSIEDNLSGKRKGGFGVY
LIEKLMDLVDYSSESGKNVLILKKNFQNKASNGNNF
>LBJ_0842 spoT, GTP pyrophosphokinase
MGFVKTPATKDMLLEGVRETLGESAYESVQKAYDVSERAHQGQFRLSGEP
YIVHPLQVGFILYELGLDEKVICAGLLHDVIEDTQYSRDDMIRDFGEDIT
DLVEGVTKISKIKSQSKETEAAENIRKIIVATIKDIRVILIKLADKTHNM
RTLSFQLPEKQKRIAQETLSLYAPIAGRLGIYKIKSELEDLAFQVLNPEE
YQEVKKNINSKKSEREGFIETLKIILLQRLSEIQIEADVDGRAKHFYSIY
RKMKLKEKTFNEIFDLRAIRIITNEVKDCYGVLGIVHTLWNPVPGRFKDY
IATPKTNMYQSLHTTVIGPDGKPLEVQIRTRDMNDIAEYGIAAHWMYKEG
KPSLSEKNVKVRWLELLSSWQDSALDPKEFVEELKYDLHEDEVFVFTPKG
EILQLPKGATILDFAFRIHTDVGLKAKGGRINGRMLPLRTELRSGDQIEI
ITDKRTKPSPIWLRIVRTPSARQKLRSYFRKLKEENKKDLQQEAEFAAEI
TLNVEVLEELKKKPLAKPAKQIDLGAGKVIVAGLRGILARLSGCCSPLPG
DGIIGFVTRGRGVSIHKKGCATAKQQEQEESMRIITVEWDYGQSESIPVL
IEVKSKDRQGIFMEIVKSISNTQTNIRESKASTDQRGNLVANFEVDVEHL
DQLKEILSNLKQIPDVYQAHRIKN
>LBJ_0225 srmB, ATP-dependent RNA helicase (superfamily II)
MKKLKFSELNLSAEIQNAILEMGFEEASPIQSEAIPVILKGKDIIGHAQT
GTGKTAAFAIPAIELLEVESKHLQALILCPTRELVIQVSEQFRKLMKYKG
NFEVVPVYGGQEIERQLKALRKNPQIVIATPGRMMDHMRRGSIRLNDIKI
VVLDEADEMLDMGFREDMEFILKDTPIDRQTIMFSATMTEDILTLMKRFQ
KHPQIIDVTHQKLSAPKIEQIYYEIQENAKGEALARLIEYRNVKLALVFC
NTKAQVDTVVELLKSRGYFAEALHGDLNQKQRDKVMNGFRNGNIEILVAT
DVAGRGIDVNNVEAVFNYDLPRDGEDYVHRIGRTGRAGKKGIAFSFIVGK
QIYNLKKIERINGIKIEAGKIPTLDDLEETKIHSYTSKVRSIVDAGHIGK
YVNQVEKLMGDDYTALDIAAALFKMTILRDSVTFDDSVQFESNFKYEERN
SFKKKPGKYRDRNFGRSGSGARTKSNPGSHSGNSSGNGSHSKFSKGDKNQ
KSGGLSSFKKKKK
>LBJ_2992 vacB, Exoribonuclease R
MNIKKKQTKQNKTAKPDTKKKIFGRSDKNKKNRFARRSEGFPESEIGRKI
LRYLRSRAGSVIQFKDLTAKILKEENQNSYGKKREKWQFEEREREITEIL
QILEAEGLIELEKKNILVNSNQKLLGTISTSKKGDGFVKLPSGMEVFVPG
QYVQSAIQGDLVEVQPNAIGKKGRLEGEVTKILRRGRDLYRMIVIEKDPK
FIFGKLLDIDGEEKEGYLLRKTILMNLQDEIQLGDVLIVKLREETEHERN
LYEVQFLRFESDTKEDLDLMRMLMKYNYSILYPENIVLNLPEEVDESTVD
DWGSRVDLRNLKCITIDGEYSKDFDDAISFVEEKSRIRFYVHVADVSYYV
RLGTDLDEEAYNRATSVYLGSRVVPMLPPDLSENLCSLVAGKNRLAFTVE
MEADWKGKITHVKYYKSVINVAERYTYNRAESEILSGDPGNWIFRMNEFA
KALRARRIEDGRVDLNLKENKVVTDSEHNVVEISVQDRLQAHILIEEFML
SANIKIAESIRKKKHPTLYRIHEPMNEEKLESLNAFLQLNGIKILLKDSS
YEAIRAVLKELEGKPAERLFNMFLLRTFMQAYYSGEYLGHWGLGFEDYCH
FTSPIRRYPDLVCHRVLQQILLGKKPLYGPEEVVTLGLHCSHQERKASDA
ERDYYKLKACRYLEKTGIKEFSATITGCKPHLIFVDLENPSVDACLISSE
FTDEGEIRLETDFSFYSKKYSKIYTLGDKIEVELDRVDYEEIKIFVKMKK
FQKKV