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# Treponema denticola ATCC 35405

>TDE0168 transcriptional regulator, GntR family
MKVIYDQNRPIYLQIVEKIKCKIVYGELKPGDKIPSMSDMSVEMDVNPNT
IFRVYKQLEGEGITESKRGLGSFVVNEPDLVGKLTEEMADQIILPAIEGL
RNLKFSDEQIIESIKAKLKINNPDAEHRGMLFS
>TDE1690 hypothetical protein
MLSFDSNKEFALTRDLGVLKGIYLAPYMQVATALIGKARHAGGNMFRHQV
DTMAILIDYGYIDSVLLKASLIHDVIEDIEDFNVNEILSIDSESGQVYEL
VLEVTKKKGQEKTEYLKNIIKNGSEKAKILKCADRISNMISLGFVTDSEF
IERYCNETELYIFPIALEVNFEMYKELMALVVSRRQYLVECGYLEERVKK
MRKAR
>TDE0713 transcription antitermination protein, NusG family
MDYYVVQVSTGKEKNFIEDAEFKNKFDELSYSIVFPQRILKIRKAGKVTE
KQLPVFAGYLFIGTDEISKDLYQHLRKCKGFYRFLPNNQEPKFLEGRDFE
ILNQFISFGGLAKISQVVFDENDRIKVIEGPLSGLEGYIVRVNKRKGRAT
VCLDMCQTAFSIDLGFEILNKEEKK
>TDE1719 transcriptional regulator, MarR family
MEMNGGFLVTKIKQLGDRIFEKILSEKNIDAFNGAQGRILYVLWQEDGIP
IGSLSIKCGLAITSLTTMLERMENQGLISRVQSETDKRKILLFLTEKAHA
LKDEYNSVSDEMGSIYYKGFSEEEITRFEECLDRIRKNLEEWQKS
>TDE0222 acetyltransferase, GNAT family
MSDTRIINISKIIANDCYEISKSFEEQQWQKPIEQYIQYMDDQNNGLIDV
LLAKDNNKFAGYCIIQWKSEYTFFYKNDIPEIKDLNVLKKYQRKGIATAL
MEEAERRIFYKSNLCGLQVGLTNDYGKAHQLYIKRGYVPDGNGLIYKNIN
VKYNERVVVDDDLTIALLKAKKEN
>TDE2413 hypothetical protein
MHIIYETNGLGFLGWITDLPGAYIRGKTLEEARGKVNKEIALYNEWLNFE
KAIDMQINEEIKKSDLHIEDADSDIIFDSELIDFDKQDDFLFWCDKVLLS
GTKTEEIYKRMKNKSLIDITMKRKTFYGDVYCTINDQYRHIVNVQNYYLN
QIGTEMDIGDEFRLNRMEFIEKLKEKYLKEGNKLYRNESEDWTVKKVIRR
AIWHDRIHIRAIERMENRLSG
>TDE0891 transcriptional regulator, putative
MKFERILEIIIYLLNHEKVSAKYLAEYFDVSVRTIQRDMVSIAEAGIPVY
TLGGRYGGYAVLENYKIKNINIKNSEQQIIISALESLATSYTNDKLNSLI
EKYNAIIEKEGGQKVFWDFSVTKENKKVQDSNMLLEKAIGGKNYIVFDYR
NSEGKSSHVCAEPLAIHYKWYAWYLFAYPKETKEYRTFKVARMQNLVISK
ERSFIKHGDIQQKMKEAELAYYKTCINIEIIFSEKEIPLIEEYFPDSVIE
KLSSQKCKTHIHVPAKERLWKALLLSFGDAVTVVSPKDYKEDLIKTAETF
LSNYDI
>TDE0937 RNA polymerase sigma-70 factor family protein
MYNRTKNNYDAEMNSLATYLKEINQIPLLTAEEEIKYAKLAEKGDEDAKN
MLVNSNLRFVVNVAKKYQNQGLPLMDLISEGNIGLMNAAERFDVSKGYKF
ISYAVWWIKQSILKAICEKSRMIRLPLNRANELVQIEKAKKEIDFSGNET
KELNEIAGILNMDNSMVHTIMNAAREPISIDAPVFDEPGSSSVNDFLQDE
THQMPEDYAMDMSLRDEVNELLKNLDDREAEIIRYRFGLGGYAPLSLKEV
GLIFNLTKERIRQIEKKALQQLKKPAEKQKLAVYVA
>TDE0808 acetyltransferase, GNAT family
MKTNHPTPANIEFKEITPDNWRIINSLSVKKEQKNFAASNVTILARAFVY
RKENAKVFAVYHSDKPIGLIMQRDWIDGEKIVCIMDQFMIDKKSQGRGLG
KAALQKWLSMIEAEKKYSCVQLCYVEGDIAAKRLYENFGFYEIDKDEDEI
IMQKDL
>TDE1497 conserved hypothetical protein
MIDLKSKISGIFKNMQVSFSHHRKPVIIIVCALIFILTLSLLLIIFSQKK
DDASYSETKKAVLSSKNSDFKSGKVDTDKLQIIDEPLYLPPIQFSREQHK
IWEKEEVDYWYEPPAEKDMEELHKQNKKIADKILEAAP
>TDE2005 conserved hypothetical protein
MRSIAAMTGITAGALYKHFPSKAAIFEALVQPLIGQTLSIGSDFSEIAIH
LYETKDFLSTKEAIRISLQNLCTLVYSRFDDFRLLFNRSAGTKYENIRHD
FVMADVTACKKFIADLKKRGINVRPLNDDQLHLIYSTALTPLFEIITHEY
SYKKALSFIDILTDVMYFCWNKIMQPETEINKKN
>TDE2487 acetyltransferase, GNAT family
MVRLAELKDLSRVAEINVYGWRNTYRGIVDDNFLFCELSVEKSIERLKEK
VNTQNSTSKLYVYEDDKDGIIKGMMRTGMCRDSDKPDSFELMAIYVEKAF
ERSGVGSKLITYFQKEAKEAGIHELCIWVFQENRIARSFYEHHGFKPDGK
TQVHEALKAPEMRYVKTV
>TDE2404 RNA polymerase sigma-54 factor, putative
MLLKQRQQQILSQKMVMNQQMLNAVAMLNLSSEELQEEVIKEVKRNPALV
FKTSSRVSAASAEEGDKHQSFLESIEDDSRKTLQAHLIEQAGESITDEYV
LDAAMLIIQNLDQNGFYWVPLEELFAGLLAEKKINHAEIKKALNIVRRFE
PIGCACSGFKESLIVQAGILCESPKTHEILDIYKTIYSLCVKIIKEHYEV
LVFVSDLKLFIKKLAQKKIDIDLETAEELAGLIDALNPKPGLAYASKGDG
EKFITPIAEIKREGNEIKIIINDEEVPALEISPEYEKIKNSGSKEEKKEA
SEFLNKAALFMNVLAYRNQTILKVLTALVNFQEAFFLGRPCKPSSEGESD
KMQAGYLKPLKQIDIAEIVGLSPSTVSRVSNQKYIRCEWGLFEIKDLFSP
EVSGGLSKDFVEKAIQEIIESDTEKKTDTRISQILKERGIDIAVRTVNKY
RKEMGLPSSYHRN
>TDE1495 hypothetical protein
MKVLVFDRKIETLAFLCEKLENHGIITIAAENGSKFICNYLDPELDAIIV
ATKELAHYSLNEARLIKKIYKDITICTYFHEDCYNIKNINIVSSSGIPEN
IRGNEKILKIILSKCKRRPDLNKDYIYSLPKKSGILLKHLIINRQKGLSD
EEISTIFWGEKIPSKQNSIYNHVYNLKKSLKKSFSNRYTILKANKRYRLI
KLKKEA
>TDE0246 transcriptional regulator, TetR family
MQVLKEEVKDRILTAAEKVFYEQDYRSAKLTDIAEQADIPVALIYTYFKN
KEGLFDEVVAGVLDKIIKMMEDEEKMEAGSPYERFNRGGASQLPKLLKNR
IKLIILIDKSSGTKHENAKDMWVKRLEQHIKDGLKRYSKTKHDPMLAHIL
ANNYVEGLMEIARHYKNEKWAEDMLFVLNKCYFNGVESL
>TDE2109 ATP-dependent RNA helicase, DEAD/DEAH box family
MLITFKELGLDDIVLQAVEAKGFEEPTPIQVLAIPRLLSGEANVIAKART
GTGKTAAFGLPLVQELRSNTGKVRALILVPTRELAVQVAGELESFRIEEY
PRIATVYGGAAIGPQLRSLKTGVEIVVGTPGRIMDHLERGSLKIEDIEYF
ILDEADEMLNMGFIEDIENIFSKANPEARVLMFSATMPKQILSIASDFMG
DYEIVEEEPQEERASLTEQFFWVVREGDKTEALVRLIDTSPNFYGLVFCQ
TKIDADDVAKELDERHYEAAALHGDIPQSQREKILERFRSKKTRILVATD
VAARGIDIEGISHVVNYAIPYDGPTYTHRIGRTGRAGAAGVAVSFVRPNE
VKRIEYLRKHARGELKEGKIPSIEQVIEIKRTRILKETAAQIEKRISEEK
PEQGFAAFANKLTEYGDAQTVLSFILQMQYGSFLSPAHYKTIKPVRSEGK
ARKSDDDSLRLYIGVGRKDGITKRKLAEMLSRLLSIPERLVDDIEVMDKF
SLATMPKNAANDALRLCKKKRGLPHMHIDVKSEAPTNYGSIGKGKRGQKR
KNGTQRKKEGLSSASKYKRK
>TDE1858 transcriptional regulator, PadR family
MIFSINTGLLEACVLALLKDSDSYGYKLTQDVKSLLPISESTLYPVLKRL
QTSGYLETYDQPIDGRNRKYYKITPAGLRQHELYIGEWKSYKELIDKIFK
GTAL
>TDE0400 transcriptional regulator, LysR family
MEFKQLEIFIKLVENLSFSTTASELNISQPTVSLTLKQLEEELDTPLFLR
STRELKLTEAGNKLYNEAKNILAERDKLIEKFIHPERKVITIGASTIPAG
YLLPSIVREFKKKHPDIYIKVEEKNSLETIKKVSLNTVDIGIVGMKIEDE
NCEFLPIYKDEFVFISANNSYYQKLKKSNPNLKRIAEEPFIIREAGSAVK
QNMELILKSQKIDLDSINISASINDTEVIKQLTAEGLGTSFISRIAVEDM
VKNKKLIAFELGDVPHQYRNIYLVWNKKINYASHIKDFLNCTECFKVKTA
IEEKTT
>TDE0332 transcriptional regulator, TetR family
MAKFKRKTKEERTYEIIEAAKKVFLKKGFHNTTMEDIVAATSLSKGGVYQ
YFKSTKAIMFAIMQEGNYFRYRRNEEIFSSAKKIDDPYEIVTQALEAKLF
DNVPEKRLYLMFLAEILYDKEYETLFWKLENQAHKFINENLEHLFKEGTF
EGKKIKYKTNKTGRLYSRLFNGILIIYELFEDKTVFDEGKRELHDFLYSC
VKKSFTIE
>TDE0133 transcriptional regulator, GntR family
MKSEEQSLKKEKIASLIQDEILTGRFLAGEYLLPERELADHFDVSRPVVH
EALLILQSKGLITMRPRHGCIVNDLSSSISMRLLTELYRNKQISEPEKIE
AGLVEFRQLILTHIIKKLINRISKLSVKERYHLFLPLKNKIHFSRSEDIE
TSAIEDFEFYRTLIDLSDSPIFLLSLETAKEIYKYQFKQFLCENISYADR
IPEYKQLFFNALIEADEENSIKVMIKLTQPETYRDAELDNSMRGGCRRL
>TDE0339 transcriptional regulator, TetR family
MSKSEDTKQLILDTAKREFLEKGYNAASVRTIAKKAGLTTGAIFRYYADK
AALFEALVSEAADGLVEQFKAAQEAHFELIPQERTSESRDLSTEYLRHFV
NYVYDRFDEFKLVLCGAEGTKYANYIHDLVELDVARTETYYRLLREKGKI
KGSISLELHHMITSAYFTAVFETVVHDMPREQAMGYVEEIAVFFNSGWDG
LLKLI
>TDE1900 conserved domain protein
MAKDLQISVITTKRAYDELERDGFIDSVQGKGSFVAYQNPERLKEAGTCI
IEEKIAEAIDEAKRLKITQKEFLEIVKLLFDEEY
>TDE0091 RNA polymerase sigma-24 factor, putative
MFKGKGILRATSDEDFRAIYEALMPVIYKVAYNIVREGDIAEDICHDSLI
KMTEKKMEFPSIDDAKYWLIRVTRNASLNHVKRCGRERKAYAKALKEDTR
KVDTGEEIILKQESINSVQAALEKLPKNLRAVLQLKEYGSLNYKEIGSIL
GISEGNVKVRVFRAREQLSKYIGESDVYMP
>TDE2290 transcriptional regulator, putative
MSKKFVFSAKEVVVYPGQGVGTITDITKKEIAGEVIDYYVIYLSDSDMTV
LVPITGIDNLGIRRIVTKAEAEAALKFLSEDFEPIPIDWKARYQMNMDLF
KSGKILDTGSVVRSLYQRSKTKELPIQERKLYDSAYRIFQDEIAAALKMT
KTEVEAAIHLHLEPLGGPIEKFKDDYDDDDLIANDDERLDDDDMDEDDIE
DSDMYEDD
>TDE0876 conserved hypothetical protein
MQNGSICQDFIVNLTQKQVSEKVGMKNVYSYQRLEKKSNPSLQMIKKITS
IFPAIKLEMLF
>TDE0703 transcriptional regulator, AbrB family
MGYPKGKYAWTVKVGEKGQFVIPKEARDVFNINPGDTLIVLGDINQGIAI
PPKNMFTSIIDNIFGGNVPKEDEE
>TDE2309 sigma-54 dependent transcriptional regulator, putative
MNKAISVLNKTNPISAEQALELILEALRELVDYELAVVMGFEDKNVLKVR
KAIGPLSSKLLDDFTINLNKRKDIARILDERKAFLFDENIPHVDTYDEIM
KLPENHSCLVAPLYIGDKAIGMMTLDHSMCSRFTPEIVRFISTISKLISV
ALVQTDASQSLIQKTESLLLERNVLLTASTNVFKDMVGSSRAWTTVLDSI
KLVAASDVPVLISGETGTGKEQAARTIHRLSNRAEKPFVPVNCSALVQSL
AESEIFGHEKGAFSGAAALRKGRFELADGGTLFLDEVGDLPFDLQPKLLR
VLQDGKFERVGGEKPVSVDVRIIAATNVDLAEAVSMGRFREDLLYRLDVF
PLRLPPLRERDDDTALLAEHFISDIRKRKGFENTSLSMAAIEKLMSMPWH
GNVRELKNVVERAAILSQGGEIPAEHLVPGTREFYISNAAKKKPLKPAVN
KETEKDKVLPEDIKPFDEAQTEIIQKALLASNGKIYGKDGAAALLNLKPG
TLQSKMKKLGIKY
>TDE2187 ParB-like nuclease domain protein
MQIPIEKIKVRQRARKEFIEIEELAESLNRVGLLNPIIVDQNKVLIAGQR
RLEAAKKLGWKTIEARVLSVEDESLALDIEIEENVQRQQFSNEELLNAFT
RLNRLKNPGFFVRIWRSIKAFFKRLFGKKKESA
>TDE1601 transcriptional regulator, TetR family
MSYCSDITKNRILECAKEEFLRNGFEKAQVGEIAKTANVTTGAIYRHFKN
KEELFFTLIEDVYEYTLDIVTDVEIRSTDKASMPLSEETDNVVIEALFSE
TMRFVDYMYEHFDEFKLLLACSKGSRVENFAEEIADRYTHKNMKLIQATA
GKKSSATKIKELEVHIITKGYITSLCECIIHAIPYNDVSRYIKSIVTFQY
YGWGGLLNELRIYHE
>TDE1953 transcriptional regulator, TetR family
MEACKRTADTKDLILKSAKKYFLEYGYQAAPLRKIVSEAGFTPGALYGYF
NSKEELFYAITDPVANKLMEVLDRIRSEMDALPKKERLYGMGKVYYPNIP
KIVDILIADRDAVKLIVNGAKGTKYENFLDTIAGRNALTISKTVKNIEEK
NICPIKEQTIEVLMEGYIATLFRLIISDKDRETIIRCMEMIGKIYETGII
ALIQKEWGNENDI
>TDE0149 DNA-binding response regulator
MKIIIVDDDCLVVSSLKTILKANGFDIIATGSNGNEAITLFNEYKPDILL
MDIRMQNMTGIEASEKILAEHSDAKILLLTTFNDEEYITKAINFGCKGYI
LKQNIDSLVPALNAVGAGSIVFDSEIISKIPQTKPARSQFKEDLNDRETD
ILELVADGLNNKEIANRLSLSEGTVRNYVSSILEKLNLRDRTQLVVYYYT
K
>TDE2778 PspC domain protein
MKKRLCKSSRDKKILGVCAGLAEYLGVDPVLIRLLWIIFALVVGSGIIAY
IIAAIIMPYDTEVKDDDDESYEYAPRD
>TDE0496 DNA-binding protein, putative
MNRIAEFIKTSRKSAGLTQEDFAIRAGLGLRFVRELEQGKETVRMDKVNV
ALAMFGMEAVPGKKEGVTSATK
>TDE2650 transcriptional regulator, putative
MNIFLNNSSGVPLYEQLSEQIKNQILSGSLKKEEPMPSMRALAASLRVSV
ITTKRSYEDLAREGFLYSVSAKGYFVADVNFKKIEKSIKKSIEEKLKEVC
GQAKKINLNAEDLYEILRRIY
>TDE2420 DNA-directed RNA polymerase, beta' subunit, putative
MRDIQDFDSLMIRLASPDTIRAWSYGEVKKPETINYRTLRPERDGLFCER
IFGTTKEWECFCGKFKSIRYKGVICDRCGVEVTHFKVRRERMGHIELAAP
VSHIWYYRSVPSRMGLLLNLQVAALRSVLYYEKYIVIDANDTDLEPMQLL
TEDEYRDAHERYGAAFTAGMGAGAIKTLLQNINLDELAAQLRAKMIEKGA
KSDQRLLRRIEIVENFRASGNKPEWMILDVIPVIPPDLRPMVQLDGGRFA
TSDLNDLYRRVIHRNSRLSKLMELKAPDIIIRNEKRMLQEAVDALFDNSK
RKKAIKGASNRPLKSISDLLKGKQGRFRQNLLGKRVDYSGRSVIVVGPEL
KLWQCGLPTKMALELFKPFIMKKLVQKEVVSNIKKAKLLVEQEAAEVFAV
LDEVVSEHPVLLNRAPTLHRLGIQAFEPVLVEGKAIRLHPLVCKAFNADF
DGDQMAIHVPLTQAAQMECWTLMLSARNLLDPANGKTIVFPTQDMVLGLY
YLTKERALPEGKKERLYSSVPEVLMAAECHAVGWQEPVLIDYETEPGKIE
TVRTTPGRILFNEEMPEGVPFTNYALNDKKIRKLIENVFKDKGPWLAVQL
LDKLKAVGYKYATYFGATLSMEDMIIPPEKAGMLEKANKEVLEIYNQYKG
GHITQEERYNRVVDVWQKTNSNLKEILMKRLQEDKGGFNTIHMMETSGAR
GSKDQINQLAGMRGLMSKPTGDIIELPIRSNFKEGLNVMEFFISTNGARK
GLTDTALKTSDAGYLTRRLVDIAQNVVVNEEDCGTINGIEYAAIKRGDEI
RESLSERIAGKYTLERVIHPITGELLIDVNEYITDETAKKIEEAGVETVK
LRTVLTCESKHGVCVKCYGRDLARNRIVRIGEAVGIIAAQSIGQPGTQLT
MRTFHEGGTASKNVEENRIVFNDYSIIVRGIKGSYVTLKNGHFLFTRKGE
FTFSRVLNEYALKKGETALVSTGTRVVKGNPLYTLKNGKEVLSENIAIAE
VRDNIIYLTGQEQTIEIRNGSEVVVKENDVIKAGETVGTFDPFADPILAE
YDGFVRFEDILPGTTLKEEADEETGVVEKRISDAHFDKMQPRIFISDESG
NTVGEDSYFLPGGAQLLVEEGQEIKAGAILAKIAKESVKTKDITGGLPRV
SELLEARRPKSPAVLAAIAGVVTIKKGLLKGKRTIMVRDEYGHDVKHLVP
IGKRMLVRDGDTVKAGEPLCDGSFDPHDILNILGENALQNYLMKEIKEVY
DAQGVTINDKHVGIIVRQMLRKVKIVSVGDTKFIFDQQIDKYRFHEENKR
VKEEGGQPAVARPMFQGITKAALNIDSFISAASFQETTKVLTNAAIAGSS
DELRGLKENVIIGHLIPAGTGMKQYRDIKLFDKNKSDLDIQMNEILERRR
LEAEAAQALEEKELIEEENFLDDL
>TDE0556 hypothetical protein
MARYELGAIYEIDAGKKSYYARLLNCDLYGVFAPLSGEISEEAFENTPYR
LYISTGSYAVKRGFWKKLFPSPDKTDIERWSRPLHLVVFTPWDIEGALNR
RTSFDKYGHTEILDEKTYIQFLKQGFISIIQPMYEKVPQFLNNYYDDWPA
SEIYSDVLTGAGTAEHQQKQMSSLKKIGFDVSKY
>TDE1789 hypothetical protein
MEESTFDKYIKNDIKQKKKFDKEYNNFLLSEFILEKMEEENISVRELARK
AEVSPTIIQKLRNNKTAGKINYQTFLSVVNSLGYRVNIERI
>TDE0630 sigma factor regulatory protein, putative
MIKLRKLLSNILISVGMGSVFALFLIFVSPRFLFLGKFYSANDMTLALSR
LEIIPEITQIHRFIIGSLVFVIVAIFADSLIRSFYKKIESRAYDKPKTKV
FAEFLKKIRFCYTIENLIDTVQNELEYSGDCSVMLVDTIENIVLYNSASR
FISSPETFSSLHEITVEYKPGVYFFNADMQGCKLKDARIAAVILEKIQFF
IICGYFNEVEPEIFNTLFSEFLSYQNRVTTLEQLLYFSELSQEWNMVANT
QKAFLPQKLPEMPMLELAAYFKPLVNVSGDYYDAIKVDEHKTLLVVGDVS
GKGLSAALVMGIVVNTIKIAKNKEDLPALVLAVDSAIKRMGLLDKYTVLF
LGLVDTEKMTIKYVNASMEDPMILTESPDGYKVKVLESTCSIVGIIDFDK
IEVHERPLYRGDVILMMTDGVPEAMNNEGVELAETDMYMESIKSFVQYSA
DDIVQKVAGMAYAHAGNQPMRDDITIMCAKVKG
>TDE1812 hypothetical protein
MEESTFDKYIKNDIKQKKKFDKEYNNFLLSEFILEKMEEENISVRELARK
AEVSPTIIQKLRNNKTADKINYQTFLSVVNSLGYRVNIERI
>TDE1222 iron-dependent transcriptional regulator
MKISQITTENYLKAIVKFLSESDKEKITTGELAKLLHVTPGTATSMAKKL
EKEKYIEYQNRIGCRLTEKGKKYGLNILRRHRLIETFLFQTLKMDGKNIH
NEAENLEHAASDLLIDKIDKYLGHPKRDPHGAMIPRKNQKEYTCTDSSLD
KVKCGIEYSISRLTGTDAQFEYYKTINLKLNSKIILQNKNEESGLAEIII
DGNKISCSTMILKNIFVEKIII
>TDE0127 DNA-binding protein
MSYDYESILAKNIRRIRHKLEISQMELALRADVSIAFINAIENKQKWVSA
ATLSKITDALNTTPYELFLTDDISQEDLTIIAGRHDELIKDLNKLLKKYT
SNCF
>TDE1330 conserved hypothetical protein TIGR00244
MRCPHCGNCDDKVMESRTLAQGDCIRRRRECLACGYRFTSYEHIEEKPFM
VIKKDGRREPFDRKKLEKGIERALEKRPVSLNSIENIVTEIEDQAVLNSG
LNKEIETTVLGEMVLSHLYSIDKVAYIRFASVYKQFSNLDEFVNEVKKVR
K
>TDE1100 acetyltransferase, GNAT family
MQIKTDIEFSKEEVINLYEEAGWTAYTKNKDKLWQSITSSLKIYSVFVDN
EFAAIARVLGDGITTILIQDIIVKQKYQNRGIGTALIKTIVKDYKSVRQT
ILLCDNDKKLIDFYKKNGLKNIQDYNISCYGILK
>TDE0660 transcriptional regulator, putative
MRSERLFEIVFILLSRKQTTAQELAKKFGVSVRTIYRDMDILSSAGIPVY
TMQGTGGGIFIDESYTINKSILTKGEQEKILLALQCLSPIDEIHTESILN
RLSAIFQKNADWIRIDYSRWDNKNDHHLFKTLKDAILERRAVKLEYLSSY
GEKTERTVYPLRLLYKSKAWYAECYCTEKNACRLFRLTRILSIIKTLKTF
NRADLLGKIPDDKKAAPPPLTNIKLKCTAKTAYRLYDEFPPELIAKNSDG
SYTLNAALPFDSWVCGFILSLGTEVEILEPENLKTEIAQLAEEIMKKHRK
V
>TDE0082 transcriptional regulator, MerR family
MNGFSIGEVEKITGIKSHTLRYWEDNIPVLQPKKDLGGRRIYSSHDLGII
YRLDYLINKKKYTVEGAAAEIINQSAAQGSLTAKISELRDQLLDIYGIIR
EEKND
>TDE2703 conserved hypothetical protein
MNKSLLKKAVILFALTVLCIGFTFAEDGKSIVQKSLDVKRPKFTHSALKM
TLVDSKGNTEERMIEQWAKDPGDKTGAAVIVFKKPASVKDTRFLQIVNKD
RANDKWIYLPALRTVRRIAGAEGSKPFMGTDADYDDLETRKIDDDTHTLL
GEETVDSYNCWKVESTAVDPKSSRYSKKITYIDKVTCIPVMAEMYDKKGA
LLKVLKVEKLEQKNGYWIPIKGNLTNVQTKHSTHLEILNIEIDKPINDKM
FTQNFLNTGRL
>TDE2277 transcriptional regulator, Sir2 family
MDKEKNDYDKLFSEITKARHLVAFTGAGISTLAGIKDFRGKDGLYKQPNT
EKMFDIDVFYRDPSVYYGMAKEFIYGLEEKQPAIVHTVLADLEKRGILKA
VITQNIDLLHQKAGSKNVIEVHGSPSVHYCINCSYTETFEETAKTAKTGE
VPRCPKCGSPIKPAITFFGEALPQKALMKAETEASKSDFMLVLGTSLLVY
PAAALPAYTLRNGGKIAIVNNQPTQFDSYTDLLFEDLEETFEEIDKRLKK
V
>TDE2509 transcriptional regulator, AraC family
MKEKTKDDTIIIKLYEGIHLEIYDTYTEKSYSLKGEPRNVFRIDYCFQGL
LEGKFENQTFSYLGEKETAINYEKVALSKSFFPLKFYKGISILFFLDKIN
SNFKNTAQLFNIDIEKICKNLDLQDGWYKIKINSEISYIMNTLYEKQSLK
HIEYFQIKLFEILYLLSVINTEEYQKEEFYSGYHINKVKKIHEYAVNNID
KNISFKKMVKNEDLSYTIFQKLFKQIYGESPYSYLKKYRLEIAAFYISST
DRKITDIAINCGYLNASKFSDAFKSVYGISPIQYRNGEKPTITK
>TDE1099 acetyltransferase, GNAT family
MKNVDCNIEKMNEKSYNTIKRDMIKNLAETFIQTKKANELTAISLAEKEL
NGILTEGVKTKNHNLYVVKKDSQKIGYLWYFIITHNNETFPFVMEINIDK
QYRNKGYGKQTMLLLEKETINLGYNKIRLHVLLNNTTAYNMYKNLNYKTI
KKIDDGEILEKELNGCLAGHL
>TDE2627 transcriptional regulator, TetR family
MPRDKTANHIKIIAAAKAEFMEKGFDKSSMRSISKRCGMTAAGIYRHCVD
KEDLFDQIVAPAVDRINAWLDAHVARYAEAVQKEKHIQWRDSEIDMMREI
IYPNMEEYHLLLAKSRGSKYEHFLHDLTEGQQTQLLKYLPMLKAQGYAVK
DIDSKELHLLLSAYTTALFEPVIHNYSLEEALHCLKAVEAFFVPGWKQLF
GF
>TDE0114 iron-dependent transcriptional regulator
MNKRIHVTGTITSSKEDYLERIYDLSLIDEQVRSIDVARALNVSRASVNK
SLGGLKEDGYIEQEPYGTITLTKKGRAIAKDVRTRHNALRTFLTQVLKVD
YEIADVDACEMEHAISKHTADKLYAYLKKLGITEDDAGK
>TDE2324 DNA-binding response regulator
MRIAIVDDEKLICEGLKIIFQSYPDIEVIATGSNGNDALKICEEKNPELL
LMDIRMPECNGVEATKKIKKSFSDIKILILTTFNDTEYIQKALQYGASGY
LLKDSSPDVIYDGIKAAISGNIVINPEVAKTMLFENHEEAEERVIRPLAE
IQDEFGLSQKEIEIIRLVSEGLSNKQIAYKQGLSEGTIKNNISVIFDKTF
VSDRTQLAAFAFKNGIV
>TDE2581 hypothetical protein
MKILNNRYRIIKELPIELKTNTGFVVHDLGSDNREQLELRLIYASDLDED
FMQFIREKFLLIKQLKESVHIKNYDFTRLISIHNKIIDEDIYLYTIEHIE
KKIPILDFLPDATTKDIFELFAAILKELNYLLTYGIVYNNFDLTNIYVIK
NNGRIFIKAKDLVTEKNQYSDQIGLLSNEEIYTFNYNHDILKTIILSLFL
KKNIIKNHEKYFQELQQIETNRLNDENEKHLYKCFFKIYNKINTRKLKKN
PTPFMK
>TDE2592 DbpA RNA binding domain protein
MSNKIRIEDEEQLISSLKDLIEAIKTQESPEELNLYRRIFKKAVPLTMRS
YVAAYLIKQAGIGGSRIYKKDNRNGLGKGTFKQNSARPSRPKVILAEEES
TSLFIGVGRKRGIFPKDIITLLIQGAGISREHIGDIRILDNYCFVQVMQN
EAETIIEKLNNSYYRGKNLTVSHSRRPEDDNFEDSETFEHIENYAEEENN
HSQTENEV
>TDE0608 DNA-binding protein, putative
METLKTNPKITQQEISKSLNISLRTVKRILARLQEENIVKREGSSRAGTW
LVVDEIR
>TDE2501 response regulator
MGRKIAKVDIALLASYGVKKVISKPVKVDELLFSIGIILGTTFPMDPTPC
ILETRVNEDVIFIELAQGLNRDKLELLQFRIIELIESYKLAEAKILIILT
DLNLTYADTANLEYLIDNILAVKVVSPKNVKLLTLNQFVTDFFSQNPDYK
MIEVVGSLGQALSALLQTTEDKIAVTQTMLNPDNEQNENASNLETRFKLD
TAEKLSIAVIDDDLVVRKMMTAIFSGLNAEVTLFENGEDFLNKVENDVYD
VVFLDMIMPGMSGIDVLNGAKKKGITTPFVILSSVTQRDSVIKALEKGAK
RYILKPIKKETVLRKMEEVLGASL
>TDE2079 sigma-54 dependent transcriptional regulator, putative
MSTVESIKRDKLNTLINTSLLINSNYSDLSVLLEKIVESAMDVVEGDAAS
LLMLEPDGERLRFEIAIGPKGIEAKKMVLDLDGIAGWVIKYNRSAIINDV
LSDPRFDPTVQKVTGYKNRNMIAVPMRIKDECIGVIEVLNKREEKDFDSD
DLNVLELFATQTAIAYQNAKHYEKSREEIICLQDQLEQDRGYHTFIAKSK
VMNEKLELCRNIAASDASVLILGESGVGKELIAEQLHLNSRRVNNPFIRV
NCAALPEGLLESELFGHVRGAFTDAISDRKGRFELADKGTIFLDEIGDIP
LTLQTKLLRVLQEMAFERVGSNKTLTVDTRIIAATNKNIEELVRQGKFRS
DLYYRLNVLPIYIPPLRNRKDDIQELAHFFLKKFSKEVKKPFLGFSPDAE
KLINAYSWPGNIRELENAVERACVLGKPPYIEEKDLLLKFESSSFEPEVN
YSNPDLKSAVNDFKKSFIVKILNEHKWNQTAAAEKLGIQRTYLSRLIKEL
EIKEI
>TDE0037 transcriptional regulator, AbrB family
MELAKLTSKGQITIPLAIRNMLGLKTGDKVFFEESRGKVYITNASQITLA
NIQTQMQGEAEKAGFQTEDDVIAYIKELRKKS
>TDE0676 conserved hypothetical protein
MKISVRFTAAVHTLLCIRYFEKDMRVTSDFISASTGVNAVIIRKILLQLQ
KAGLVETAAGVGGSHLAQTADKITLLDVYNAINEGDEERDIFNFHPKPNP
KCPVGRKIHLVLDDKLDDAQNAMKDSLSKTTIADLSKDI
>TDE0259 transcriptional regulator, MarR family
MNDVESLIRRTAKIQYKVNANDKKPRTFGTQHKLYQSEIHFIEAIGLDGG
YSASELSEKLGITNGAVTQVADKLLKKKLIEKYKKADNKKTVYFKLTKEG
TVAYNNHEKFHAGFNEKLAAYLSSLSKKEFDAIARLAELVDNNIPDLSTQ
>TDE1784 transcriptional activator, AraC family
MNSIQSFNKTIDYIESTLDTEPDEKEIMNLSRYSYPLFSRIFSILVGYPL
NEYIRLRKLSRAAADLRNGNEKVIDIALRYGYESPDSFAAAFKKFYGVSP
SEVRNGKSFKVFSPVKLSLTVTGGQTMEIRIEKKRAFSIAGLCIQSNQTT
DFPKVWNDLFNKASHEELITMGNGQSYGSCYEVKDCNSFNYMAGYDCTDE
QKAETFGLSVMHIPEAEYAVVQLKGPVPDCIHQGWKYVMDTFFPEQGYRH
AGTPDVEVYKEGDMYDKNYNMELWVPITKE
>TDE1035 transcriptional regulator, PadR family
MLNKQEILRGLTDTLILGRLYSKDSYGYEINKQIHQKSSSLFQLTEATLY
TAFRRLEAAGLLTSYWGDGDTGARRRYYSITKTGKKLYRENVNDWEEFSA
AISGLLEL
>TDE1990 ATP-dependent helicase, DinG family
MEYFDDDYFDDEKIYPLDPKTVSSLLEEDGPLASFFERYEAREPQLALTK
SICRCFNEEAIGVFEAGTGVGKSLAYLLPAMMWAKQNKKRVVISTGTINL
QQQLIEKDVLTAKKILGKGFQDMKACLVKGRHNFLCLRRMTQALRENDFF
TEGQEELDKIKEWATETKDGSRSDLDFMPTEKVWSTVCSEPDNCPMNKCP
YFSGCFVMKLKREAENSSILVANHHILFADLSVRAEGFGYQGTAVLPSYD
NIIIDEAHGIEDAAQSFFSSDISRFALHKQINLLYRFRRGKQAGILSGIV
SISKKAELFTEIINLLEVAAASFNILEEQALQVLQTYQSKSLAQTSSDEK
EKLLSCVDNFFKNINNLNIKLENLINAADGEEDEEGYIREGLVVLRRLKK
MASVMENFLNSSEFPNDVFWFEKIKTSQGEAVRFIQTPLNLAPIMRRSVF
MPMATVICVSATLKIGDDFNFWLNRNGLYNFTEKKIIKDFFPSPFPYEKN
VVFNIPTDMPMPDENNFQDAVNETVLALLEITQGKTLILFTSYDSLQKTC
EYVREHIDEKIKILKQGEADRMQLLYEFKDDVTSCLFATSSFWAGVDVPG
ESLSHVILVKLPFAVPTEPIFKARADLIEKSGGNSFMQLSVPEAVVQFRQ
GFGRLMRSNTDRGIVTVLDKRILVKRYGSIFIQSIPQTIQCFSETKAVLN
KIEDFLYNN
>TDE0393 transcriptional regulator, TetR family
MPKSTFLKLSDERKEKLRKTIYNMFIKKDYESISIRDLVKEMDISIGSFY
KYFDDKAEMYLFFFSEIEKKIFEEEKRRNASFFYPAKLLDLHEILTQEEI
DFSTSWLNVPEDVLYKFYFRGHAKQLYRSILDELTEMQQKAQLNPNIKAN
IAYHIIITSMFSFMLYIKENKITDKEDFFSRKTTYYQTVILPGILSEKYY
KQKYSKNAIKSEIIL
>TDE0989 hypothetical protein
MLEKIKSLDNNMRFSELAKVLKTYGYIMTSPRSGSSHYTFRKKGCNPITI
PNRAPIKSIYVRMVKEVVEAEENNQKER
>TDE0441 hypothetical protein
MNCFKTIIELQDILFPKFYTAMDSENNEYIFLKTQDSMINSLDKVSDKTQ
LEAYENHIHILRFHQLWENEEPYYDVKDFPNIEVFKIRA
>TDE1670 transcriptional regulator, MarR family
MLNDIYKNEIINAWVEDNEPVDLIEKRYKNISNIVDGMYDFVLSFSYYYT
IRRDYGTGKKYTMIEMHILTDIYDNENITVSALAKKWNRTSSAISQIVHR
LIKWGLVYKEVNQADGKVFFLHTTEKAKKTVLTHKAYDNKDNVKTRKKLL
ETFTVDEMVAFDKILKAYTDILEKNNSKNKPL
>TDE0191 acetyltransferase, GNAT family
MIIREVTIDDYKDIRNLNKNALGYDFPLEKTKTQLEKILTGKEAKIFGAF
VDNKLIGYVHIADYECSFNDSLKNIMGIAVDPSYRKQGIGRDLLTKAETW
ARDTGAAGIRLVSSVGRTEAHKFYEAMGYTSKKEQKNFRKIF
>TDE1382 transcriptional regulator, ArsR family
MIEDDEIGVSNEETVAHARAKMPDEQTMSDLGDFFKNFGDSTRIKIVSAL
ISGELCVADLAEVLEMSASAVSHQLRILRQAKIVKSRRNGKQVYYTIDDN
HVGILYSVGLEHIREGR
>TDE1371 RNB-like family protein
MNTNAIVLYKNRPALIKGQADGKFEIETETGIKKVREKDFSVLAPSNSSS
LKNILTAACPEPDFNEAADFFEEGTALFSEISELVWENLNPEQMWAAWLL
VSASPLFIAESPDLPIKIRTKEEAESIAAAALKKETEKQAEEQERKEFIS
SLSKFIKEKKEENFDLKKYSHFLQEIEALALEKTDKSKLLNEAHLKETPE
SAHKILISTGYWKIEKNPYPTRFKHPLNSPKLELPPIEHNKKYEDLTHLT
SYAIDNEGSTDPDDAVCFDGENLWIHIANPADIITPDSKSDMDARKRGAT
LYIPEGVSRMLGESAVDAFALGLHDDSYALSFKLKLNDSAEILDVDILRT
KIKVSCISFEKADEEKMNTNLKHLFEIAEKNRKKREAAGAVSIDMPEVQI
KVETENENQKVFISPYNFTESFLMIKEMMLLAGEAAARFAFKNNIPFQYV
SQEAPELPKKLPEGLAGEYRKRKAMRPRNVGTIPAMHSALGIAMYSQITS
PLRRYGDLVAHQQLLKFIDGKEVMKTDDLLMRIAAGDIAGKNCSYAERAS
RQHWTLIYLLQNPDWQGEAVILETIKNTARISIPSIGYETEMRLKKELSI
NERINVKAEDIDIPNLTVRFVQV
>TDE0440 DNA-binding protein
MFLREQQNLVINRLRKEREKAGLSQLELALRADISQNMINYIETGKRTPS
LDTLLKICHALNINPAVLFSDTEEEKEKAKKQVLDIIQRWM
>TDE2320 RNA polymerase sigma-24 factor, putative
MIKFSNLLRKESPEAVQDRLLCKAVLAGNTEAFSLIAAKYQKRVYSLGMS
FFKNHDDSEDFVQDIMLKTFSALPKFRGESSFSTWLMRIAYNSAINSVKR
KREFVSAFDDFEIKTNDLTPEERQIQNCVKNAIRRAVNDLPEKYRICIDL
YFFYDMPYADIESITGIPVNTIKSHIFRSKKILKTELENQGIYGQEESPE
YPVLFKLNLAYDM
>TDE0348 transcriptional regulator, TetR family
MAKAFTEQERIKIKEKILEAALELFHDKGTKALSIAELTKRAGIAQGSFY
NFWKDKEALIMELIAYRSSQKLNYIEKKFSNSLSDPAKFLTDIIYRYSVD
LMVKMQKQPVYEDAFKILEAKNRNEVHRIESLYDDFLTKLIEYWEQNGSI
KRADKKGLLNAFSGSFLLCSHYYQFDKEYFNEMLLTFISGIVNKYIEK
>TDE2367 transcriptional regulator, putative
MTTDKLITKKKSLKQDAYIKIYDLVTDNTIKPGDIINLSDLEKYLKISRA
PIRDALIELCNENVFKSIPRYGYELITLRQEDLVEMLNYRLVLECGFLEK
NWKEVANSDHAILNKLLEHTREFSNTNAVSEWQNNSVFHIGLFKLHNNSH
ALLSLEHTMKKMTRFFIQNYWEKWEEITKKTFSSHHENIIYAIKKNDKAR
ALKHLSSDIGGFKR
>TDE1664 conserved domain protein
MIKKIFFVAVCSLLVVSAWAQAPSIVGTDYVRPAIHYVEEGTNYVNSDVF
FKLRSTDKETGLDFVEFALNGADFMRYKNPFQLLEEGKYDISYRGFDNSG
NLELPKTLSVIVDNTAPDTMIKTTAPLYNDGVVVYCSADTKWYVSAADIV
GGSGVAAGYMGTDLNSLKISGNGKESEQTYVSLDGEGPVNLYYTAIDNVG
NLAPIKLLAVTIDRTAPVVSIANSNRLINKDEEYMVFPSDRVVDEEGRVI
VSTSETVSFAAKDDLSGVDAIYVKVNDGEYTKYVEPIRFTQNAVYKIEVK
AIDNVGNVSEPVMYTFYVDQITPNSEVDIIDRSGNLLPATTPANAQ
>TDE0033 DNA-binding response regulator
MLKIAVIEDNEVQSRLLKDYANEWANKNNLLPEIKLFSSGEQFWFEFEEL
SDIDIILLDIQMSRISGIELAKKIRKTKSDAVIIFITGIPDYMQEGYDVE
ALHYLLKPVKKEKLFDCLDRALKKQDKVKEENFVFSCEGRLTTLKQSEIV
FIESISHNLKIKTLKSEYITRMNLSEAEEKLNSKLFVKTHRAFIANLMHI
RQLQKDKAVLADNTLIPISRREYKNVNTLFIGFFTQGET
>TDE2412 acetyltransferase, GNAT family
MDLNFRLSKDAEHIALMSKDVQELHYRLYPEYFKPFSYDEILNFFKKQLQ
EENWFCYIVSCDGKDAGYALFYIRDYQENPFRKAYRGIHIDQIGIAPEYR
QKGIGKAFIKEIEKIAVKEKASQIELTHWELNEDAKCFYESLGFDTYIRF
VVKKI
>TDE0476 conserved hypothetical protein
MNLIIFSGPPSSGKTSVILKTIDALKKQNIKTGAVKFDCLYTDDDLLYQK
AGVPVQKGISGSLCPDHFFVSNIEEAVQWGIKEGLDLLVSESAGLCNRCS
PYIKNILGICVIDNLSGINTPKKIGPLLKSADIVVITKGDIVSQAEREVF
AARVNAVNPRAVIMHVNGLTGQGAFELSTLLTDKAEDISTVQGMELRFPM
PAALCSYCLGETRIGENFQMGNIRKMKIAEEQGRKNEQ
>TDE1107 N utilization substance protein A, putative
MSEGIIEAIREFAQEKGIDDDFVLHIVEQALKASYKKQFGTDANAVFNEE
TGKIYSKKIITEDAKNPVFDISLEEAKKLAPSCEAGDELLVEVDPKSLGI
NSVKVGMQRAIQCIREMQKDTLYAEYSTKVGEIIIGYYHRERNGNIYVDL
GKVEGLLPKKYQCPGDHFGRNAAAGEESRIKALVREVKKHRQSNVVQLIL
SRTDAEFVRQILEVEVPEIESGIVKIHNIVREPGYRTKIAVSTDRDDIDP
VGACVGAKGARIQAVIAELDDEKIDILPYSEDPKAYIKSALSPAEVMDVM
ILDAEKRKALAIVSDSQLSLAIGKHGLNVRLANRLVDWNIDVKTEEQFKQ
MDIYTDARKAVENLFTDETSDEDEEYEEISNVAELPGITEDILTVLRNNE
IEDIQDLINMEDDEIRALEGLTTEMADTLLDIIANAVEVVEDDGDESDEE
SEPVSDDEGEVEEFECPECGHKITTDMTKCPNCGVDLAFEYEDEE
>TDE2115 HAMP domain protein
MKKILTIFLMFLFFISFLSAKEFYWENPSVISGRNGYFLKSASNANISAS
VWEEVVKSSDTEGLIYISTGVYVNNKWTINERIIPPIPYTADIPSIVSIA
VGNDDSILIALVKNRNTITILKSTDYGKTYTVKNIVTEIYDLLSPQLSVA
SNGKYLMFVSHGADEKFSIFYSSSEDGLNWPAFSEFNFAKKMDRIFLPAH
TASSKNDVLVFQALDKSGDRRTYQLFSSFSSDGCSSWSEPVRITDNFDFN
NQRPNLLYINSEKSIFIVWEQSSYRSEKNSPAYAVLDSKGKLASSIEILP
SGNGTMFSPRIIAYNNKPLITWSETYDGKSSILIARKEDSIWKTDSVASI
TGSLLFVNPFFVDGNLHIVWQEGVRAAKIMHIEPDHEVAKAQLQPLNFDS
KTLEGRQKITMKIKFPNDSSGIAGYSYEWSKDVPPEFVAPVIKKLKDETV
LVYEPEEDGLWYLGVRVCDYAGNWSEMTTISYERDIVPPAAPIFDLLALD
KKGFVKSNTFDIKWNPPDLDINGKPETAINGYIWNLSYLGTVDKFLSYLK
TAGSAFIDDDVVQKVLSDNLDVELNTSKISSVSNKREFKNYENGLYALTV
SAVDAFGNIGAPAVKYFALNKYIPYTYVADINAVQALDGSISLSLVGKGF
AAGGEVTSIYVDADGLPPYDLTIEKKDFSVLSDKLISNIKINYLDPGKYY
VGLMHSGRGVYFAQKTISFDDIGNIKLGDYGKVYKYNWLLSAMDSDFSDY
FLIICFTIFILLIMTLSITGVIYSVKEAIKIKYEVTVLLRGGAMSFGKEK
KLSALKVRGGGLRLKFMMFTMTLIISVILTLDLPLGFRFSETQERLLAEG
LASNTQVLLESLSSGAKAYLPSKNVLELGFLPSQVSALKEASFATITGVH
IDNKKVGYNFVWASNDEDILSKIDTPDFVVGKSELLLPQLENVYKKLDEI
DKEARDSVGEISDEIQSLTDMTMLIALNTDLKSVERRNEIQSAINQMETK
LSSELNGLSIKGSGSYPEFNSKKLSRDITSYLFYKPILYRQTGGQSNFVQ
GMVYIQVSTQSLIEQIDEATTALRKVILLISLGALSAGLVGAYILSSIIT
APIKKLVRHVAMIAATEDKELLAGKDVKLRTKDEIGVLGTTINEMTNGLV
EAAAASKDLTMGKEIQKMFLPLDLDEAGRKLTSGKTVDDNVEFFGYYEGA
RGVSGDYFDYIKLDDRYYAIIKCDVAGKGVPAALIMVEVATLFLDYFRDW
SYKKQGLKIDQVVSRINDLLESRGFKGRFAAFTLCIMDSISGNVHFCNAG
DNVINIYDAALKKMKEVILTEVSAAGVFPTFMIDMKGGFKVETVKLNSGD
VLFLYTDGIEEAKRLFRNSKLEPILCEEPGLEKDAEHETHSVGQDGEELG
KPRVCKIIESIFARSSFSLKKWHNPIENEQFDFDFTNLEGTIEDAVIGLV
SVEKIFRMYQDPKATERDMVQVDKKIDLFLNKHFRQYQTYCGNRVPNTSY
NEYLYYTNVREDQQYDDLTILGIKKK
>TDE0070 RNA polymerase sigma-70 factor, region 2 family
MTENLLLQYIKDSKKYPLLSAEQEAELADEVKKGNTEAIEVLVTSNLRLV
IKMAKKFSSNENQILELIQEGNMGLMKAASKFSKSFKVRFSSYAAWWIKQ
SFIRYLNSADKVIKLPVRKEALIRQVHKEEENYKIKYGILPSYSQLAEIM
KEKVDIIAQIKSFNYTDICSLDDPVDNERSANLYDFIPCNTYNPEEEFID
NEFKEKLNKCLEILNDREKDVLRNRYGLDGTMTSTTFAVLGKKYSISAES
IRQTQLRALKKLRADTNKIKAMVSV
>TDE2486 hypothetical protein
MPDKISHILISKKYLEKINDIKGKEYFYYGAIYPDLYDLSKKEEYYKSHF
IQKGSGYNSKLLKNFIKKHSYAPPSFLKGVDFHIFTDHFVSKNLNKYYSF
YTEIKNKTDIELSKILSDYALYHCRNEKIIPVILKEENDEQIQSSFYEFE
KYRKTDIGDISSVNNNYLEFIDEIIDKYLKQNLN
>TDE1170 DNA-binding protein
MAFRENVKKLMDKHGLIAKELALRAKISVNTLNMYLGYKESLPNVDIGVK
IAKALDTTVEYLVTGIESSSGIVIAPEDIELIKKIHLLDDIDKKVVEDLI
QSFIDRKRSEVSAMETSRIG
>TDE1746 conserved hypothetical protein
MKIKLMDTGKNILFLLVILIVLITSFVLVLIKMQRDTVQDYLSSDKILKV
LLVVEDKGVPISISILAYYPETKRAAMFDVPANIGLIIQSLNRTDAIGAV
YTEKGISSFKAEIEKLAGISVPFYLTCNLENFSMLTDMLGGLSVFIPSPV
DIENDNTHVLLPSGSVSLDGDKIRDFLVYEDDLDAEGESAARKQKAVLAL
FRAINDNSPEIFSKERFSVLSGNFKSNVAGSDLKNLLESISKMDSERLVP
QRLTGAVRIIEDKRLLTPFREGQQIKEIIRQTIAVLASDDSSALERVYAL
EILNGTNVQGLAKSTSELYQSFAYDVVSIGNSENPVAETVLIDRIGNPSV
AKIVAKVIRCKNIQTTQLPAEGEYGSETNVDFTLILGSDFNGFFVVEKKE
DKKDSDENDKDKN
>TDE0606 ParB family protein
MAKKSALGRGLNALLEEQPANQIVESLNISEDSIINIDPKLLQPNPYQPR
KTFDEEKISELAESIKEHGIIQPIVAEKHEDKGYFIIAGERRTRAAISLG
LETVPVILRSFEEKKKLEVALIENIQREDLNAIDEALAYQEIMELAAINQ
EELAKRVGKSRSAITNSLRILKLPEEMKDALRVNKITAGHARSLLSIVNP
ADQKILFSRILESELSVREAESMAADLNSGIGRITKKQKKETQSLSTDDF
ELRDIEQQFINSLGTKVQIKGNLKKGVVEISYFSKDDLDMLYKKINS
>TDE1606 transcriptional regulator, TetR family
MGNGDFDLTHKKILECGKKIFKEKGFEKANLREICAQAGVTTGAFYGHFK
DKEALFSELVQPVITDIEYHYSLLKQQSFTMYKKETVITKQTIESILDLK
LKGAVGMVSYFFDNKDIFELLAFCSYGTKHEHFLDEIIEKEDENHLKILE
MIHGKKKAAQVITKKGIHLLNHAYLYALSEVAVHCETKEEAEHNAYLIAD
FFNEGWKKMRTGQFNYELKLIYNYE
>TDE0079 DNA-binding protein
MDISIGSKIRALRKVRSISLQQMAKDLGMSYSYLSGLENDKYSVSITNLQ
KIASYFKVNLVSFLTPNGPVPRVFRKKDLYSNANTYDNIAYKVITPESYT
HLQVSYAYLPPNEPSERNIHKHGEGQEMVLVLDGCVCVMVEAEKFKIEQG
DCIIFDSDAEHLIYTEEQPATLVIVSSPPYGQQILPEKKKP
>TDE1115 DNA-binding protein, putative
MFKRKKMSDEMFAELLQSVKEAVLIEKGEIPPARVFEIEPLDIAKIRSKT
NKTQEEFASMLNISIGTLRNWEQGRRKPDGAALSLLKIVSANPQYVESVL
QG
>TDE0090 hypothetical protein
MSTCPDKDLYSAYVDGELQSPWKEKIEVHLVSCEKCRSVVDSYRKISLKL
SENSFPEPDLDGSFLKLYAKRQDCLKKMEFNKSKPTSWFYKSNKIPIPAL
AAAALFLFVLTPIIVLSTQESLEPSGAVAATEFKAIDSIINGLKPVNKFK
LNVSNVLGVNEDVSVFEGKKKEINLSQYVNLYLPPSNNAEFDILKQEIKP
QVLFLNTQNAITRTSVNNGQ
>TDE0874 transcriptional regulator, putative
MVEAILYLEGDPLTDEALCKISGLSPEIVSDAIKALQESYASPQSGIELA
KMMGGWVIMPKKDLWEHLKDRYGKKNEGRLSRAAMETLSIIAYSQPVTRA
EIEAIRGVSADNMIRLLIEKDLIKEVGKKDVPGKPAMFGTTKEFLKIFRL
NSIADLPKLDETERERFELAR
>TDE0344 transcriptional regulator, AbrB family
MRSKKDGKLHAWTAKVGTKGQIVIPKEARKIFSIETGDDLLILGDERRGV
AIMKGDAATKILMSIQGELIDEN
>TDE0814 transcriptional regulator, putative
MKTVEAIKNCEPVSAIQKILMEKEIPPRVEYSLSEMGKSFMKVLKVMQKW
GEENLL
>TDE0895 transcriptional regulator, AraC family
MRTVEDYWEDFEHFGFIKHLKDGRRDYILDEEKGSGGFSILGDTETAVAT
ISDCTLYRPLVIKADNVNERIIELGQYYTGLASYYEKKEKSCEFEYGLNA
YVNTFSFYGYKRIEPHVRFINIGFGFREKFFSSLPITLEEDFFERAACVL
NPEPIVIPKITAICNSLKECTLEGGALKLYIQGKCLEVFSLLYDYIYKAK
PAINVHLSQKDKAVLKEVKTFIEEHFADHVTIAELAKKFAINQQKLVTGF
KDCFNATINGYTQKIRMTKALELLYDDTLSIIEIAQAVGYYGDGYFQKAF
KETYGITPSRMRRDL
>TDE0006 Snf2 family protein
MARQTYGTTPWGAWFLDMLKAYDDSGRLSRGKTYANTGKVNSLVVNGQTA
GAKVKGNYSPWYHVYFKFPPLSKTNKTAIRSILEKHPIELAGLRAGIMSP
ALIEALKKKKVRLIPARWNLIERDCTCPDSGDPCKHMAAVLFLLAKEIDH
DPRLLFKLAGFDIDSINVPETEVFEKGGTQKLGLLQEQPVPLSLRKNETL
NKAADLSSDSSVSETAHNSCELQSPLKFSLGESYLPLITNILPPEPNFSS
SDFIIKLTEFYHKAVLNYGLNFYGQEKQSEKQEEKSVNPFLFARVKVNID
NIRKQKRAFPLEPKSPLTVNIKLGETHEINQTLLQAQNFYKTRNSLNEMS
PSVKILFSLFALAGKLIQSSAFIPAVFTENKKLFIFWKSLSASSEIKADI
FKFAASLTKDFFLPVGKWGRLYCAELLLTALLTEYAASLKFFPNKSYTKD
KEIDKLFFLNEEIDISVPGKRNLDTVIYSWLSVLNYSNCGYEYRLTLEAL
KDDEFFLLSALVRKAKEKRIEAGDDSFALEAEAPFAELNTAAKRSKNPDD
ILRFPATLAAYLPALSILAIKKNVMLSREETGLFLQKSAKLLQRFGIDIV
LPKSLKNILTPKPVISVKSVKGAGNIVSFLNIDDVLSYDRALMLGDTLID
IDEFKKLFLNKSGLVKFNDQFLLLDPEEVAKMLKALEKPADTKEVLQAVL
SGNAVCSKPASEIIKNIFRQEEVPVPQNLNAELRPYQKQGYRWLYANIKS
GFGCLLADDMGLGKTVQIISLMLSFKNSKEAESPFLVIAPASLLSNWEHE
IAKFAPSLKTAVYHGAGRKFTTEADVIISTYQTMQKDIEKLKDKKVFCII
LDEAQAIKNSGTKKAHAVKAIQARGRVALTGTPVENNLEDMRSIFDFFLP
GYLGTADEFRKKWRIPIELHNSETEADDLKKITSPFLLRRLKTDPKVISD
LPDKIITNQYCNLTPEQLAIYENLVETELHKVMGAETKIERQAYVLKLLT
ALKQVCNHPRAYDKETPIEMKYSGKAAVLIELLNEIISSGEKAIIFSQYV
GTLDILKNIIQKELGTEPLLLHGQMPASKRKKAVEVFQTDSAYRIFLISL
KAGGTGLNLTAANRVIHFDLWYNPAVEDQATDRAFRIGQTKNVFVHRLIC
SGTFEEKIDEMIQKKREISGMSISAGETWISKLSNEELAGLFKS
>TDE2659 GAF domain/HD domain protein
MTEKNKYKELSKEQILIKILETESLIHSVQDVDVLLEQILTEARSVVNAD
AGSIYIAEGDRLAIRYAQNDTLQKKRPAGTKLPYIFFDFPIDNYTIAGYA
ANTKKLINIPDVYNIDADKPFKFGKATDEKTGYKTVSNLTIPILSMSGML
LGVLQVLNALDKYGKPKTFSHDDEIYLSHFASNAGIALEHAFVTRAMVMR
MIKTAELRDPRETGMHVNRVANYSVEIYDRWAFNNGIPMAEQTKYRDSLK
IASMLHDIGKVAISDLILKKAGKLTDEEFSVMKTHTWLGARLFSGNDSPL
DKLSMEIALRHHENWDGTGYPGHIDIETGEALKTDKKTGCPQGLKGEEIP
LGARIVAIADVYDALSSKRSYKDSWTEEDILKELKKMSGKKFDPEIAKAF
FEVLDRIQAIKAHLADE
>TDE1305 DNA-binding protein
MDWYKEAEKRQTPAKTLRFYRTLNKLTQVQLAEKLGVTKQFISNMETGQK
PISRKTAYLLSEIFGIDAGRFI
>TDE0675 conserved hypothetical protein
MTEKIEKLKQVLSEAETIVIGAGSGLSTSAGFTYSGERFEKYFSDFEVKY
GFHDMYSGGFTPFESLEELWAYWSRNIMINRYMDPPKPVYKDLFSLVKDK
DYFVITTNVDHCFQKAGFDKNRLFYTQGDYGLFQCSEPCHEKTYDNEKQI
RAMWEFRDEMKVPTELVPRCPVCGKPMSMNLRADHTFVTDKGWYKASKQY
EKFLQTRNIIKNGEQEGDGKVLFLELGVGGNTPGIIKYPFWQMTEKNPNA
RYACINFGEAVVPPKIEKQSICINDDIGEVLKKMV
>TDE1114 transcriptional regulator, TetR family
MPEKDENRESRQEDRESRQNQLIDAATTLFFSKGYTNTSVRDILDEANDR
TSSPSVFYYYFESKEAIYRAVLRRYSERYVKSVQDAIDTHKDDAQSLMTQ
VTRLFLKTVKADAHGKEAAASPDNLLYSLKLKEELTQKFVEVWEIFIRSL
DWYKADAETVHKTAVFIAGGIGEMMYDFGYVHEKKEGSARKLMDCMIDFC
AGALNAPAAEKEKYRRIVYDNLA
>TDE0878 conserved hypothetical protein
MATNLAINEELLDTAYKIGGYSTKKETVNTALEEFIKRRKSEDLIKLFGQ
VEYDPHYNYKKMRLR
>TDE0655 response regulator
MKQLIKILIVEDDNTIASVLKKNLEQWNFNVRCAKNFSNILEEFEDYKPS
LVIMDIGLPAFNGYHWCSEIRNKSQVPIIFLSSRNDKMDIVMAMQMGGDD
YIEKPFDMDITIAKIQAVIRRTYQFTASMNEIGFAGTVLNLSTLTLVYNN
KTTLLTANEIKILKCLYLAQGEFVSREKIMDVLWQNNQFVDDNTLSVNIT
RLRKKMENAELFNFIENKKGLGYKLNEHHGNR
>TDE1365 transcriptional regulator, TetR family
MDKKEELLASAHAIFTKKGYKETNISDITKSINVATGSFYKYYSSKEDIF
LEVYKLENTRVRQLVMEHVDWQLPIESIIESLFFVTSKHLFGNKIMAEWS
NPKISKILRKYYFSEQGKKDNQFHNFLMTVIDKKMKELKIKPQLAVRLKR
VYEFLYYIDCHVTDSDFEGCSEVIKLLTVYFVKGLVYENSAR
>TDE2445 DNA-binding protein
MTLQEIFISNLRRIRKEKHITQEKLAELCNTDTAYIGQIETHKRFPSINF
IEKIASALQIEATELFKNHKKDKLSPSLKLELHNELINEFDKLLSETLKK
L
>TDE1123 sigma factor regulatory protein, putative
MKEINTLDVYALITLSILNILLLLFLIRITATNKKKAGEISRPFVLLTHS
TLAFAFIISISTAASVFLKNYMILNIGLSVVLVVFTVYITVSEKIYLQDQ
VEKQKKDKANADYIKKLQNLPSEESLRARKLISTARLLLQKTNGLISGKK
DISSEMFPYIAESFLMELSADGAVVLAVQSFEEVLAVKALIGTFPPPYKL
PDDLARKEDHVFSNFKYARFEMGESIFTEVASQGKTLFIKDCKGNPLLPN
NGNEKFLQHGSLIFFPLMVSTVLVGVAAVSRNPDNVPFSENEVKIGEYLS
DFAAEMINLTLNISEASEHAEIENITDTVAKIQRILLPKNLKKVPGLEIG
EYFLQERGICSDYYDVIVQQKRVFIVLADVAGKSIQSAIIMIMIRAILYL
ITNTDQNTESILDWLNKGITGKIDIDHFASISLLSYEQKTNTIEFIGAGN
QAMMIWNNEKNKIELFQQKTDPIGIDVRSTYKSIKIPLHEGDVAALYTDG
IIETLNKAGEQYGAARLAKLIADNHSKNSKDIVNKIKNDMTSFIGTAQTH
DDRTLLIIKAR
>TDE2474 acetyltransferase, GNAT family
MEILIRPTEKKDLPLVKALWADGDVMKFVGFPDGLVQTDEEMARWYDWVL
KNSPLSMHYSIFEGEVYCGETWYSIDTVHDNLTSLDIKLFAKARGRGIAS
KALSFAIEQARLKGAKKVWVNPVPQNEKAIKLYKRLGFSASKVPEHILKK
EGEDGYIYMEKELR
>TDE0549 TfoX N-terminal domain family protein
MASSKEYLNFILNQLSELEDISYRAMMGEYILYYKGKIVGGIYDDRLLVK
SVKSAIAYMPNAGYELPYDGAKEMLLVDDVDSKDFLTGLFKTMFDELPAP
KPKRRR
>TDE0820 transcriptional regulator, TetR family
MDNNTEKIFADKDELNTRTKILHAAKQEFLNKEFADTNVRAIAEKAGVTT
GALYNLFDNKDGIFEALVSGVFDEFLDIVAHRDVFDAENFGMKTSDLSAI
IELSQRRFLKMVDFFYDNWDAMKLIVCCSKGSSYEHIFDKAIDLIDRKTL
QWLKQDGVKLSRRIRFFIHVMVTISFENLKEIFYHNLKKTEAVDYVLDFN
VYHCAGWKQYWMEQVKGNG
>TDE1101 acetyltransferase, GNAT family
MLKTEKAGIEEAKTILDIYNDSNKVFGVVPEQDIIETFENMIKTENTYIL
YEDNQAIGFISLKDKNTHGLISAIYIKHKIQRKGYGKYILNFIEQEAKHI
GLEYLILKALKMFEWTIEFYKKNSFTIFDKKEDELPFITEYIPPAKWEVI
MIKRIMTCK
>TDE1097 acetyltransferase, GNAT family
MSIKSIGLTDKIISQKEVKDFLQKANLNQRGNLIGLFDKEKIIGAGSLYT
NSFHPYRDYINIHIEKDYRNKGLGSRLLKALKENSAKKRFQVMCSSGKEE
LIQFLLKEGFVLARRSYSFDLKKEAQNIFLSKETSTEFKNMQIKPFINLN
SKEKEEFKKIFYFNYADTHKSINPLNKDICIKEFSNEILADCDEERSSCL
ISNNEVSAYVIVYIENLPEIGYLGGKTIEEIETYLNYFQVIINNLLNAYE
QIYFEIDDTDYYAFPLMTALQINCKESYNTYILN
>TDE1486 conserved hypothetical protein
MSIPDNTETSFDHRLIDEQLSSRLRLAVMSVLIGCEKIEFTLLREKVNAT
DGNLTAHCKKLENAGYLKVEKLFVNRKPLTLYSVTDEGRKAVKNYIKQLT
SLIE
>TDE0542 acetyltransferase, GNAT family
MLHLEKVNGKNIWDILKLQVSEAQKSFVAANDISIIEAYITITANGYAFP
FGIYDNETPVGFLMIGFDVHDDWIDAPEIAKGNYNLWRLMIDKAYQNNGF
GKDAVKLALDFVKTFPCGKAEYCWLSYEPENQVARKLYSSFGFVETGDTD
GEELISALKL
>TDE2721 helicase domain protein
MQESKPLIIQGDRSILLDIHDPEANEARFALIPFAELEKSPEHLHTYRLT
PLSLWNAAGVGLSADSIMKTLTGFSRFKVPDSILVWMKETMGRYGKIKLL
PLEKPQEEKNGAEEKTDVEESGENQADGIRHETPDAEFLRLKPENALIFK
ELKSSKILLKYLIEDPDEENSFLISLLNRGTVKQALLKQGWPVQDEVPLR
DGEPLDISLKEKTSSGAEFEIRDYQRDAASSFVGDKSAGTGFGTIVLPCG
SGKTIVGMLTMSLLKTSTLILTPNVAAVYQWRRELLDKTNIKDEDIGLYT
GEVKEIRPVTIATYQVLTWRPNTDAAFPHFKIFRERAWGLIIYDEVHLLP
APVFRITAELQVIRRLGLTATLVREDGCEGDVFSLVGPKRFDVPWKDLEQ
KGWIAKAYCTEIRVNIAPSKEIEYAVGTTREKHRIASENPAKLEIVKKLL
TKHKENQILIIGQYLSQLEAIAKEINAPLITGKNTNAERELLYDSFRKGE
INVLVVSKVANFAIDLPDASVAIQVSGVFGSRQEEAQRLGRILRPKECDS
HFYSIVTRQTIEEGFAEKRQKFLAEQGYDYSILTEAELDK
>TDE0817 histidine kinase-related ATPase, putative
MKFTKEIEKTIKTFIIEQVSSHKNDIVTFTMKHFGISKPTTAKFLNQLVS
EGIIEMKRKGRYPDYSLVTKKYFFVYKLKDKLEEDVILRKDILPLLSGLQ
ENVQRIVQYCFTEMVNNVIDHSNADTMNVEVDLNALNIEIFVIDNGVGIF
NKIQKDLGLEDPKHSILELAKGKFTSDPERHSGEGIFFTSRLCDEFTILS
DNLFFSGHHENDWLLENPDSIPVSGTVVSMLIEKKSNLNISDIFNEYADP
DKQPGFYKTRIPVKLMQYEGALLLSRSQAKRLITRFDKFLEVILDFQGVS
EIGQAFADEVFRVFRNAHPDVHLKPINCVPAVQRMIAYISADYFQNVYNS
DSADINRLN
>TDE1647 DNA-binding protein
MTTLIDVQFIAGKDGKPEYAVIPFKVFQTLCNHKVREFNEKETIPHEVIK
KIHLEDMSSIQAWREYLNLTQTEIAEKMGISQAAYSQMETSKKNRKATLE
KIAQAMNIDYLQLRI
>TDE1162 ParB-like nuclease domain protein
MAERKTILVSEVLPNLDRKMGGYGNIDTLAASIKEIGLINPITVRYESGD
NEFPYTIIAGRRRLEAVKTLGLKEIEAVVYAEDELIPNEEIALAENVNRL
DMHPVDEGANFKKLLKEGKTIDELSKTFDRSPSHIYQRIKLTELTDNMKE
FFKKGSINISQAARIACLPTEVQENIYNAISKDTWFDGNADYAIRRYAKN
RLDFPCTLCKNCTKRTRYTDNNLFPELNDRDDYCLDHECYEQEIVKHYRE
KIEKGVSNYSDLDFLFVNGIKEEFLMSLQKFFDFKIDLCSFMDYTQLDQR
VDVCTLFDEVRKCIIPWYDVIDDKIKFVMKDEDYNKYFKTKREITDEEKL
IIEALPDEYKEEAKKTADKQNLFNYSMERQAKTNTVCTLLKKEFLKPNPT
FYLSDNFFDCIFRSSNKDFICDAFKIMTGANLTNLKDTKRFNFKHIDFLN
LFFYAFILRILDSNIYEGLDTVIKLLGLDIKEAKKIFNEELKNLVIKDLK
KAPDEESDDESEYELEETEDEDITDDSFRSEKNEDGEKVCYI
>TDE1169 phage DNA-binding protein, excisionase family
MIMNMKQVMELTGYTQSYIYNLVHKKMIPVYKPNGGRLFFVKEEIEQWLL
GGRQMTSEEMHKEADKMLLDMAARRSKRRTK
>TDE0801 conserved hypothetical protein
MQIGTKFSVSIHILLCVEFFKDKCKVTSDFLAESVKTNPVVIRKLMSALK
NAGLIEITQGTGGIALKKKAAQISFLDIFNAVESIKDGKLFKIHDTPPNE
CPVAQKINFLLDGYFLDAQTTLEKKLNSFTLQSILNKIKDIQIS
>TDE1579 fibronectin/fibrinogen-binding protein, internal deletion
MSLNNKEIDLILEELKLEGFFIQKIIQPSYTALVFYLYKDKPLTLFISLD
AGACRLHSTRKKIPKFDKPMRFMELLKSRIKGGKILKAEQLNEDRIIRLH
IASGAGDFFLYLRLWSGAANIVLTDENNLIIDAFYRRPKKGEISGGTWLT
PEPQKIKKQDYCVREYDKTKTFNEAVEEWYINNAPKVSKEALLDEAENLY
GTKILKIEKALLKLKAKREEFLNAQSLKNAGDLLFSNLHLIKKGMKFIEL
EDYTKNGAKITITLEPLKTPQENANLYYEKYKKAVSGLEALEEDIISAEK
EIEKLKEKIEKIKTEENPYLIQKILQKEKIPVQQKAKNTKSAPGLKFFSE
GWTILVGRTAAENDELLRHFVKGTDLWLHTRDYAGGYVFIKARAGKSIPL
PVLIKAGNLAVFYSKARKNGQADLYTTQVKYLRRAKNAPKGTVLPTHEKN
LSIKLDEKILKQLEEEKISAL
>TDE2684 hypothetical protein
MAKFRIPLICTIAALALSFLLGLISGVRFSTILLRSLIISLISGGFVLGA
QILLDHFVPDLFQPVNAEKSAKTETGKNLNISIDEPVEMPFIDDEEYDPE
SDMIEAEPVDEDSISDDATELSDADLIDEDFENIKDDSQASASKNGVSSG
TEKKQEKNTVKELEELPDLQDFIPEDEPEQDDQMDFTQRGTSAFDVSTDL
AGSGMDTNTMVNAIRTVLKRDS
>TDE0056 DNA-directed RNA polymerase, omega subunit, putative
MIFPLKELIEFDDNIYEITCASTRRAYQLAKIQDPNVEKSGDKVVSAGAK
QIFTGEVNYQIERHPEFN
>TDE1346 RNA polymerase sigma-70 factor family protein
MTDLEKNPAIIKLLEYAKRKRTIGLGDLDDLLPEDLMSPETIPDILDILE
GAGVQIKNEGISESNSESDSDSQSGNDEDYRLLDDTYEEEDDDIKSPYSD
EIETPYIEKEKPRHETAKKLVRTSHEAGVDDPIKLYLQEIGKEDLLTADE
EVSLSKSMEDGEAIIKKVIKNSGILIPEFFVIGQKAFSKLDPAESNKPRK
ELSEEMAEKKRLKQVYGDSLRNIYSEIKQYMSLKKHCYDRESLESFLESP
ELQALRKKMFNSLKRIHIESEEIEKISDRFIEATEKVQDYQHKKERKEKQ
LGIKSYADLRKLGKRLAIPREREKLEKELNISANEVKDIYTQIQVLTRKI
RKIEYDFEATVDEVIDLTSEIKNGQRMLKNAKDKLINANLRLVVSIAKKY
INRGLQFFDLVQEGNIGLIKAVEKFEYRKGYKFSTYATWWIRQAITRSIS
DQARTIRVPVHMIEQINKVNRESRQLMQKLGREPNDDEIALQLGWSIEKV
KQVKNVAREPISLETPIGEEEDTLLGDLIEDKGVENPSNRTELTLLQEQL
EMVLSSLPEREQEVLKMRFGIEGGYPLTLEEVGLYFDVTRERIRQIEAKG
LRRLRHPKRSRKLKDYLDN
>TDE2683 fliA, RNA polymerase sigma-27 factor
MANTDYENIPEEELWDKYKKTSDPKIREYFILKYAPLVKYVAGKVGIGMP
TNVEFDDLVGYGVFGLLDAIEKYDLDKNVKFNTYAVNRIRGAIFDELRSI
DWVPRSVRQKSREIEETIADLEARLGRSASNEEIAYAMGLDIEEYNSLLL
KISATSVISLTDLRFSNDDSEEFSVGDIIEAPSSLNPDVIVEREDIKRVI
VEAIKELPDREKKVLIMYYYEDMTLREIGEVLHVTESRVSQIHTSANIKL
RAKLSNVTKGIK
>TDE2165 hypB, hydrogenase accessory protein HypB
MQEFKIIEIKEGVYETNNAHAEKLRKKLKEEKKFLLNLMSSPGSGKTTLL
KASIEALKKDFRIGVMEADLDSAVDAETISQTGAKVIQLHTGGMCHLDAD
MTEQGLEALGIADLDLIFLENIGNLICPAEFDTGALKNVMILSVPEGDDK
PLKYPPMFQVCDVLLITKMDASSFFNFSLEKCTGYVKKLNPNIKIFPVSA
LKGDGMEAWIEWLRSAVKGI
>TDE1287 mfd, transcription-repair coupling factor
MPQPLIDSLQSSIRSWKDMKNAFDEIDENSYPYNITGISGGLFGFFLTEY
LYKTRKPVLVVVPTEKEAEAVRADLDFSGIENFVLPWWGSLAYRPISPTA
PVFSERAEVLIRLLESGNESYTKNKPPVFITCQRSFLTPVPPADYLKQNK
VEIAAGSSLDILSLAELLSLWGYIRVPRVSVRGEFALRGEVLDICLASNS
GSEKTAYRIQFDFDKVEKIKSFDIASQGSLEEYKKINFYPVKEVIWNDER
IDCLEKNLKTYSEFSENILKIIDALKEYKTFEGEEIFYPLAFQKSSSVLE
YAELNDIPVFYSDYDRQKNSSEILLREYMGLYKKTKTQFDENEKRKALIS
EYPEPQRILLQFESNVQKYNKSIYFRTLAEQEDKNKTLKFKTDPPRSFFG
NIVYLREELNNLLNDDWSIFVFAESDNQALRIEEILHEDRIKILPYNLSG
GFGIPDLKILVIHENEIFGRRRRIPKSVKTAKSSVIDTFIELNPGDYVVH
VNYGIGKFRGIERVKILDTERDYINLLYANDETVFIPIEQADLVQRYIGN
EGEAPHLDILGSKSWENRKNKVKKSVEDIAAKLIDLYSKRKASTGFAFQK
DDEWQTAFEAAFPYEETDDQLTCIAEVKEDMEKPVPMDRLICGDVGYGKT
EVAMRAAFKAVMSGKQVAFLSPTTILTEQHFETLDKRFKNFPVKLARLSR
FVPKGEQKKVLEKLKKGEVDILIGTHRIIQKDVVFKDLGLMIVDEEQRFG
VKDKERLKQMKHNVDCLSLSATPIPRTLHMSLLKIRDMSVIATPPQNRKP
VETVIAEFNAEKVAEVIRRESERGGQVFYLHNRVESLDETLFMLQSLLPE
IMIETAHGQMSPNQLEEIFERFSLGGFQVLIATTIIENGIDIPNANTIII
DRADMYGVSQLYQLRGRVGRSDKKAYAYLLYPDDKALSEIAMKRLQVISD
FTELGSGFKIAMKDMEIRGAGNLLGREQSGDIYSVGFDLYLRLLDEAVQK
LKNQDYEPVQESVIELEYSGFIPDSYISSPETKMEVYKKIAAVKVQGDLD
RVYSEILDRFGPAPSEVESLLALSEIKIICNHLSIASLKERKAAVRIEFA
RVSKISVDKLLRMIKESAGRVSLDPKAPNVLILQTGKIGLKEKSEFIREK
LGSLM
>TDE1657 nusB, N utilization substance protein B
MSVGRRRGRILAFQALVAWDVGGAVLDDLLNFSWQNEDSIKDPNGYLFPK
MMVLGTIENITEIDKVIQENLDNWVIDRLNSVDKAILRLSVYSLIYQKDT
PPPIVIDEAINLAKDFGTDDSYKFVNAVLDSIKNKS
>TDE2426 nusG, transcription antitermination protein NusG
MAKAWYILHTYSGYENKIERTIRTLIEKGIISADFVTDIKIPEELVIENK
GGKKRNVKRKFLPGYMLVEMNLPDLGWKSVCSEIRKIQGVTGFLGTAGNE
KPQPISPDEAKEILQKTGEIKGDKNIRVIQNFSEGQHVKIIEGAFASFTG
VIDEVMADKNKLRVMVAIFGRTTPVEVEMSQAEII
>TDE2579 recG, ATP-dependent DNA helicase RecG
MLISEIQGPLTNIAGVGAAAVSQLKRLGVENAGDLLRLFPRDWEDRSKIN
VLLDWNKFQKIHVEITVAGHEWFGFGKMKTLKLIVADKNGMTASLICFNR
PFLEKSFPVGARAFVYGSFYRKYGEIQSSAFDLEKPENMQSKILPVYPLT
SGLGQAKLRKIIASALKMYAHGIDSELPESILQKYGLPPKQEVLFMLHTP
KSMAEVEKGRYALIFEEFFLFQYAIGMRSIERRGRLPNLEDERNIDKTVK
KEPVLRPLQSSLLERLNFKLTQDQLSVCAEINEDLDGPNPMARLMQGDVG
SGKTLVAFLACLKVIEQGGQTAFLAPTELLARQHAENAARLLEPLGIRLA
FLTGNTKAKGRSRLLQELQKGNIDLIIGTHSLFSQGVQYKNLRLAVIDEQ
HRFGVLQRSAIIQKGAESNEEKRSPHLLMMSATPIPRTLALSIFGDLDIS
TIKTMPPGRKPIITYVAGEDKAERVYNFIGQEILQGRQAYFVYPLIEENE
DLSLKSAERMFEELKTGFPNHSLALIHSKVAEEEQKRIMEEFRSGKLNIL
VATSVVEVGVDVPNATCMVIEHADRFGLSALHQLRGRVGRGDLQAYCFLI
YGKKITEDGRARLTVMKETNDGFIIAEEDLRLRGPGDIGGVEQSGYHLGF
TIADPARDFKILQEARSAAFELLEQTKF
>TDE1503 rho, transcription termination factor Rho
MTIRKRKTLPQVSEDTLFDTGINSDENLGLSQSDVQADDPSLSPANEIQA
AVEQTRIEQNNEADDEVLEKKVVVRSRGRKKTESFSDEVETKPAKRTSVT
AKKRIPKDIQEEKEEVPPASDSSFKIIINDLTKMRMHDLRDMAIKYGVPE
DELSLMKKQDVIYHILKNHTNQGGTIFASGSLETLPDGYGFLRSPQNSYL
TGTDDVYVSPSQIRLFNLKTGDTVYGQIRSPKEGERYFALLRVETVNFDE
PAKSQRRIPFDNLTPLYPREKLNLETTTQEISTRIMNLFCPIGKGQRGLI
VAPPRTGKTIMLQKIANAITANHPEVYLIVLLIDERPEEVTDMERTVNAE
VISSTFDEQATRHVQVAEMVLEKAKRLVEHKRDVVILLDSITRLARAYNQ
TMPTSGKVLSGGVDSNSLHKPKRFFGAARNIEEGGSLTIIATALIETGSK
MDEVIFEEFKGTGNMEVNLDRKLSDRRLFPAINIKRSGTRKEELLLTEAE
MQLMWILRKFISSMDDADIIEFLIDKMNKSKNNEAFLKSMNAGLAQKE
>TDE1027 rnc, ribonuclease III
MFPIKSGLEPKRKQELLEFQKQAGLKFKDLRLLDLAFHHRSFSNEHNNFH
ANNERLEFLGDSVLGLVAASYLYKSFEDRPEGELAKIKASAVSEDALSKT
ASKLNISNYLVLGRGEEMSGGREKKAILADALEAVIGAYYIDSGFKAAQK
FVLRLLESTIHSVLEKKFISDYKSLLQELVQKKFKTVPKYELKKASGPDH
DRTFWFSVSINGKVYGPLSGKTKKEAEQSVAKVAYENLCSESTVSK
>TDE0791 rpoA, DNA-directed RNA polymerase, alpha subunit
MARKNLLKGFKKPKGLEFAQQESTESYGKFTASPFETGFGTTIGNCLRRI
LLSSIQGYAISAVLITSHDADGVPHTISSEFENIPNVSEDTLEILNKLKQ
IRLRLSDESEQGDFHFEFKGPASITSKDFAVEGQLEILGEPFYVMELMKG
ANVSFDVQVDFGRGYVPAEVNEKYIEIVGTIPMDAIYGPVLKVSYAIEPC
RVGQRNDYDKLILEIWTDSTVRPEDVLGEAAKIAKDHFSIFINFNENDYL
GEDEDDNEEAVIKQLLATSINTLDFSVRAKNCLDSAGIKTLGELAQKSED
EIESMRNVGRMTLNEIHAKLAEYNLRLGMTDYSHLKNTIKVSRQKEETDE
A
>TDE2421 rpoB, DNA-directed RNA polymerase, beta subunit
MFARGQKIDRRYYGKDVPNFMELPNLIDIQIQSYNKFLNKEKKTDETEIE
GLESVFHTTFPIESTNEDMALQYLSYSLDYDSIKFSEIECKQKGLTYSVP
LKAEIDLFFKETKEIRRKNIYMGDIPLMTERGTFIINGAERVVVSQIHRS
PGVIFSHEKGVYSSRIIPYRGTWLEFEIDQKKELIYAKLDSKKRILGTIF
LRALGYDTREKIIDLFYKTKTAKISPDRTEYEELIGQVLARDVYVKGEDG
EKRKMHQAGEKIHPHNIDDLIQNDVKKITIIDFKGKDSLDSQIIINCFER
EEIKYTPDPAVNDEPTVEDALNAVYSVIRPGDPITYENAKEDLHNMFFTA
RRYDIGKVGRYKLNKKFDYSDDVKGTTLIEEDIFKTMKFLIKVYIGEESI
DDIDHLGNRRIRSVGEIMTDVLKKAFSRMERIARDRMSSKEMDTIKPKDL
ISIKPIVAAIKEFFGASQLSQFMDQVNPLAELTHKRRLNALGPGGLSRDR
AGFEVREVHYTHYGRMCPIETPEGPNIGLIVSMANYARVNEYGFLEAPYV
KVVNGVATREIEYLSAMDEDKYFIGQVSSAIGKDGKINTDQVSCRKLGDY
TSISPKDIQYMDVSPKQIISVSASLIPFLEHDDANRALMGSNMQRQAVPL
VFPEPPRVGTGMEKKCAYDSGVLVKAKRSGKVEFVSSDTIIIAPEKGKNK
EDKDEYTLLKYQRTNQETCYHQRPIVNVGDTVKAGQPIADGPATYNGELA
LGRNILVGFVPWNGYNYEDAILISRRVVKEDMFTSIHIKELSTDVRETKL
GAEKMTCDIPNKSEKSLDDLDSEGIIRIGSKVKPGDILVGKVTPKSESDT
TPEFKLLNSIFGEKAKEVRDTSLRVPHGTEGTVIDVQRLKRDQGDDLSPG
VDEVVKVLIATKRKLREGDKMAGRHGNKGLVARILPEEDMPYMEDGTPLD
ICLNPLGVPSRMNIGQILESELGLAGLKLNEWYESPVFESPSMEQIEAKL
KEAGYPTSSKVKLRDGLTGRLFENEVFVGVIYFLKLAHLVDDKMHARSTG
PYSLVTQQPLGGKAQFGGQRLGEMEVWALEAYGAANTLQELITIKSDDMH
GRSKIYESIVKGEPSSSAGIPESFNVLVQELRGLALDFTIYDAKGQQIPL
TERDEELIKREKTSTNF