TitleGenColors Logo
spacer
Home spacerGenomes
spacerMethods
spacerDocumentation spacerExternal links spacerContactspacer spacerLeibniz FLI
spacer
QuickSearch
2024-05-20 19:21:29

Gene list

Applied filters:

COG category: Replication, recombination and repair
Organism: Treponema denticola ATCC 35405

Number of genes found: 135

Free access
Sort by:

 

Hide UniProt / TrEMBL protein name View in Fasta format (DNA) View in Fasta format (Protein)  

 
Treponema denticola ATCC 35405
NameLocus tagProduct / DescriptionUniProt / TrEMBL protein nameGenomic elementTypeBeginLengthStrandGC-content
NA TDE0738 conserved hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS775764 261 - 0.35249
NA TDE2592 DbpA RNA binding domain proteinSubName: Full=DbpA RNA binding domain protein; chromosome CDS2627166 627 + 0.374801
NA TDE0006 Snf2 family proteinSubName: Full=Snf2 family protein; chromosome CDS6200 3585 - 0.407252
NA TDE2491 DNA polymerase domain proteinSubName: Full=DNA polymerase domain protein; chromosome CDS2514795 795 - 0.466667
NA TDE1654 ATP-dependent helicase HrpA, putativeSubName: Full=ATP-dependent helicase HrpA, putative; chromosome CDS1702359 2613 + 0.41217
NA TDE2588 integrase domain proteinSubName: Full=Integrase domain protein; chromosome CDS2623636 1203 + 0.39069
NA TDE1709 DNA-binding protein, HU familySubName: Full=DNA-binding protein, HU family; chromosome CDS1764909 321 - 0.398754
NA TDE1573 DNA-damage-inducible protein J, putativeSubName: Full=DNA-damage-inducible protein J, putative; chromosome CDS1621631 258 - 0.313953
NA TDE2721 helicase domain proteinSubName: Full=Helicase domain protein; chromosome CDS2777923 1773 - 0.455161
NA TDE2029 hydrolase, TatD familySubName: Full=Hydrolase, TatD family; chromosome CDS2057238 855 - 0.422222
NA TDE1825 hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS1857340 1095 - 0.276712
NA TDE0016 ATPase, AAA familySubName: Full=ATPase, AAA family; chromosome CDS20597 1326 + 0.450226
NA TDE2135 conserved hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS2164726 753 + 0.298805
NA TDE2033 ISTde1, transposaseSubName: Full=ISTde1, transposase; chromosome CDS2060382 1185 - 0.348523
NA TDE2734 hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS2789211 711 + 0.523207
NA TDE2530 radical SAM domain proteinSubName: Full=Radical SAM domain protein; chromosome CDS2557502 828 + 0.359903
NA TDE0435 ATP-dependent DNA helicase, RecQ familySubName: Full=ATP-dependent DNA helicase, RecQ family; chromosome CDS489648 1704 - 0.441315
NA TDE1621 conserved hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS1669043 1791 - 0.340034
NA TDE1990 ATP-dependent helicase, DinG familySubName: Full=ATP-dependent helicase, DinG family; chromosome CDS2006457 2130 - 0.399531
NA TDE0506 DNA-damage-inducible protein J, putativeSubName: Full=DNA-damage-inducible protein J, putative; chromosome CDS558535 273 - 0.326007
NA TDE2486 hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS2509377 555 + 0.259459
NA TDE1620 hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS1667049 2004 - 0.33982
NA TDE2221 conserved hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS2262824 1035 + 0.355556
NA TDE2682 conserved hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS2721478 1971 - 0.411466
NA TDE0039 ISTde1, transposaseSubName: Full=ISTde1, transposase; chromosome CDS44579 1185 - 0.348523
NA TDE0427 hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS483166 1374 + 0.283843
NA TDE1207 DNA processing protein DprA, putativeSubName: Full=DNA processing protein DprA, putative; chromosome CDS1239376 933 + 0.39657
NA TDE2730 hydrolase, TatD familySubName: Full=Hydrolase, TatD family; chromosome CDS2786726 774 + 0.427649
NA TDE2581 hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS2610922 771 + 0.246433
NA TDE2109 ATP-dependent RNA helicase, DEAD/DEAH box familySubName: Full=ATP-dependent RNA helicase, DEAD/DEAH box family; chromosome CDS2133665 1713 - 0.446001
NA TDE1721 radical SAM domain proteinSubName: Full=Radical SAM domain protein; chromosome CDS1775280 909 + 0.458746
NA TDE0730 hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS769286 1392 - 0.324713
NA TDE2015 lipoprotein, putativeSubName: Full=Lipoprotein, putative; chromosome CDS2036501 1122 - 0.262923
NA TDE1844 DNA integraseSubName: Full=DNA integrase; chromosome CDS1873287 1008 - 0.440476
NA TDE1022 ISTde2, transposaseSubName: Full=ISTde2, transposase; chromosome CDS1054002 1077 - 0.317549
NA TDE0302 conserved hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS333363 279 + 0.333333
NA TDE2267 HRDC domain proteinSubName: Full=HRDC domain protein; chromosome CDS2304072 483 - 0.325052
NA TDE1450 MutS2 family proteinRecName: Full=Endonuclease MutS2; EC=3.1.-.-; chromosome CDS1495460 2457 + 0.404151
NA TDE2472 ISTde1, transposaseSubName: Full=ISTde1, transposase; chromosome CDS2495102 1185 + 0.348523
NA TDE0085 ATP-dependent DNA helicase, UvrD/Rep familySubName: Full=ATP-dependent DNA helicase, UvrD/Rep family; chromosome CDS97686 3420 - 0.332749
NA TDE0171 nuclease SbcCD, C subunit, putativeSubName: Full=Nuclease SbcCD, C subunit, putative; chromosome CDS200105 3093 + 0.396056
NA TDE0193 conserved hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS228703 1977 - 0.3217
NA TDE2586 DNA polymerase III, gamma and tau subunits, putativeSubName: Full=DNA polymerase III, gamma and tau subunits, putative; chromosome CDS2620341 1839 - 0.430669
NA TDE2118 topoisomerase IV, A subunit, putativeSubName: Full=Topoisomerase IV, A subunit, putative; chromosome CDS2149244 2112 - 0.436553
NA TDE1881 methyltransferase, putativeSubName: Full=Methyltransferase, putative; chromosome CDS1903140 552 + 0.396739
NA TDE0556 hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS591628 555 - 0.4
NA TDE0266 conserved hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS297857 792 - 0.310606
NA TDE2335 ATP-dependent DNA helicase, UvrD/Rep familySubName: Full=ATP-dependent DNA helicase, UvrD/Rep family; chromosome CDS2369781 2238 + 0.424486
NA TDE0010 MutT/nudix family proteinSubName: Full=MutT/nudix family protein; chromosome CDS14720 567 + 0.396825
NA TDE1971 DNA polymerase III domain proteinSubName: Full=DNA polymerase III domain protein; chromosome CDS1985831 1290 - 0.391473
NA TDE2505 hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS2530265 417 + 0.410072
NA TDE0227 adenine-specific DNA modification methyltransferaseSubName: Full=Adenine-specific DNA modification methyltransferase; chromosome CDS257076 2634 + 0.250949
NA TDE0170 nuclease SbcCD, D subunit, putativeSubName: Full=Nuclease SbcCD, D subunit, putative; chromosome CDS198929 1152 + 0.405382
NA TDE1607 MutT/nudix family proteinSubName: Full=MutT/nudix family protein; chromosome CDS1657097 525 - 0.293333
NA TDE2679 conserved hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS2719658 885 + 0.314124
NA TDE2303 conserved hypothetical proteinRecName: Full=UPF0102 protein TDE_2303; chromosome CDS2343195 393 + 0.343511
NA TDE1891 conserved hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS1911346 765 + 0.330719
NA TDE1875 hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS1895896 1101 - 0.333333
NA TDE2463 hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS2488630 624 + 0.38141
NA TDE2219 membrane protein, putativeSubName: Full=Membrane protein, putative; chromosome CDS2259051 1686 - 0.396797
NA TDE1786 hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS1825195 1044 - 0.241379
NA TDE1137 conserved hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS1166156 684 - 0.323099
NA TDE0663 conserved hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS697930 258 - 0.310078
NA TDE2705 ISTde3, transposaseSubName: Full=ISTde3, transposase; chromosome CDS2751217 639 - 0.314554
NA TDE1991 conserved hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS2008724 765 - 0.29281
NA TDE2265 hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS2302305 390 + 0.358974
NA TDE2742 site-specific recombinase, phage integrase familySubName: Full=Site-specific recombinase, phage integrase family; chromosome CDS2796940 810 - 0.393827
NA TDE0441 hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS496466 270 - 0.248148
NA TDE1280 conserved hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS1315840 702 - 0.366097
NA TDE1398 conserved hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS1437332 2187 + 0.400549
NA TDE0966 hydrolase, TatD familySubName: Full=Hydrolase, TatD family; chromosome CDS991490 822 - 0.358881
NA TDE0938 conserved hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS961053 1212 - 0.441419
NA TDE0199 hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS234289 510 - 0.390196
NA TDE1173 site-specific recombinase, phage integrase familySubName: Full=Site-specific recombinase, phage integrase family; chromosome CDS1201347 1065 - 0.414084
NA TDE0363 conserved hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS409626 444 - 0.268018
NA TDE0140 ISTde2, transposaseSubName: Full=ISTde2, transposase; chromosome CDS162871 1077 + 0.31662
NA TDE0099 adenine-specific DNA modification methyltransferaseSubName: Full=Adenine-specific DNA modification methyltransferase; chromosome CDS115788 1287 + 0.353535
NA TDE1209 site-specific recombinase, phage integrase familyRecName: Full=Tyrosine recombinase XerC; chromosome CDS1242485 918 + 0.360566
NA TDE1611 conserved domain proteinSubName: Full=Conserved domain protein; chromosome CDS1659841 654 + 0.288991
NA TDE0729 conserved hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS768198 1017 - 0.352999
NA TDE1752 ISTde2, transposaseSubName: Full=ISTde2, transposase; chromosome CDS1804412 1077 - 0.31662
NA TDE1999 DNA polymerase III domain proteinSubName: Full=DNA polymerase III domain protein; chromosome CDS2017203 654 + 0.437309
NA TDE2266 reverse transcriptase family proteinSubName: Full=Reverse transcriptase family protein; chromosome CDS2303132 987 - 0.321175
NA TDE0706 adenine-specific DNA modification methyltransferaseSubName: Full=Adenine-specific DNA modification methyltransferase; chromosome CDS740560 1113 + 0.319856
NA TDE2176 site-specific recombinase, putativeSubName: Full=Site-specific recombinase, putative; chromosome CDS2204491 1839 - 0.364328
NA TDE0721 hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS756891 1386 + 0.251804
NA TDE2245 topoisomerase IV, B subunit, putativeSubName: Full=Topoisomerase IV, B subunit, putative; chromosome CDS2284380 1818 + 0.428493
NA TDE2660 conserved hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS2697248 360 - 0.377778
NA TDE2587 endonuclease/exonuclease/phosphatase family proteinSubName: Full=Endonuclease/exonuclease/phosphatase family protein; chromosome CDS2622331 1020 + 0.40098
NA TDE2751 conserved hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS2807710 1545 + 0.390939
NA TDE0086 conserved hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS101129 2838 - 0.324524
NA TDE0229 ATPase family proteinSubName: Full=ATPase family protein; chromosome CDS260956 1881 - 0.246677
NA TDE2244 conserved hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS2283160 1221 + 0.353808
cas1 TDE0328 CRISPR-associated protein Cas1RecName: Full=CRISPR-associated endonuclease Cas1; EC=3.1.-.-; chromosome CDS365205 873 + 0.327606
dinB TDE0963 DNA polymerase IVRecName: Full=DNA polymerase IV; Short=Pol IV; EC=2.7.7.7; chromosome CDS986035 1188 + 0.367845
dnaA TDE0001 chromosomal replication initiator protein DnaARecName: Full=Chromosomal replication initiator protein DnaA; chromosome CDS166 1410 - 0.382979
dnaB TDE1662 replicative DNA helicaseSubName: Full=Replicative DNA helicase; EC=3.6.1.-; chromosome CDS1716038 1338 + 0.423767
dnaE TDE2786 DNA polymerase III, alpha subunitSubName: Full=DNA polymerase III, alpha subunit; EC=2.7.7.7; chromosome CDS2839313 3450 - 0.417971
dnaG TDE1345 DNA primaseRecName: Full=DNA primase; EC=2.7.7.-; chromosome CDS1383579 1788 + 0.393736
dnaN TDE0231 DNA polymerase III, beta subunitRecName: Full=DNA polymerase III subunit beta; EC=2.7.7.7; chromosome CDS263980 1104 - 0.319746
gyrA TDE0295 DNA gyrase, A subunitRecName: Full=DNA gyrase subunit A; EC=5.99.1.3; chromosome CDS324310 2448 - 0.45098
gyrB TDE0002 DNA gyrase, B subunitRecName: Full=DNA gyrase subunit B; EC=5.99.1.3; chromosome CDS1684 1917 + 0.449139
ligA TDE1538 DNA ligase, NAD-dependentRecName: Full=DNA ligase; EC=6.5.1.2; AltName: Full=Polydeoxyribonucleotide synthase [NAD(+)]; chromosome CDS1581708 1938 + 0.421569
mfd TDE1287 transcription-repair coupling factorRecName: Full=Transcription-repair-coupling factor; Short=TRCF; EC=3.6.4.-; chromosome CDS1322878 3468 + 0.400519
mutS TDE2603 DNA mismatch repair protein MutSRecName: Full=DNA mismatch repair protein MutS; chromosome CDS2641616 2676 + 0.433109
mutT TDE0299 mutator mutT proteinSubName: Full=Mutator mutT protein; EC=3.6.1.-; chromosome CDS330220 420 + 0.366667
nth TDE2534 endonuclease IIIRecName: Full=Endonuclease III; EC=4.2.99.18; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase; chromosome CDS2560284 633 + 0.407583
ogt TDE0217 methylated-DNA--protein-cysteinemethyltransferaseRecName: Full=Methylated-DNA--protein-cysteine methyltransferase; EC=2.1.1.63; AltName: Full=6-O-methylguanine-DNA methyltransferase; AltName: Full=O-6-methylguanine-DNA-alkyltransferase; chromosome CDS252688 519 + 0.34104
pcrA TDE0903 ATP-dependent DNA helicase PcrASubName: Full=ATP-dependent DNA helicase PcrA; EC=3.6.1.-; chromosome CDS920368 1989 + 0.426345
polA TDE1637 DNA polymerase ISubName: Full=DNA polymerase I; EC=2.7.7.7; chromosome CDS1686212 2811 + 0.421558
priA TDE2490 primosomal protein N'SubName: Full=Primosomal protein N; chromosome CDS2512793 1983 - 0.450328
radC TDE0973 DNA repair protein RadCSubName: Full=DNA repair protein RadC; chromosome CDS998030 678 - 0.435103
recA TDE0872 recA proteinRecName: Full=Protein RecA; AltName: Full=Recombinase A; chromosome CDS894981 1245 + 0.460241
recF TDE0230 DNA replication and repair protein RecFRecName: Full=DNA replication and repair protein RecF; chromosome CDS262889 1083 - 0.354571
recG TDE2579 ATP-dependent DNA helicase RecGSubName: Full=ATP-dependent DNA helicase RecG; EC=3.6.1.-; chromosome CDS2603378 2037 - 0.459499
recJ TDE2190 single-stranded-DNA-specific exonuclease RecJSubName: Full=Single-stranded-DNA-specific exonuclease RecJ; EC=3.1.-.-; chromosome CDS2224251 2133 - 0.423347
recN TDE1301 DNA repair protein RecNRecName: Full=DNA repair protein RecN; AltName: Full=Recombination protein N; chromosome CDS1337521 1686 - 0.414591
recO TDE0436 Recombination protein OSubName: Full=Recombination protein O; chromosome CDS491414 810 - 0.432099
recQ TDE0326 ATP-dependent DNA helicase RecQSubName: Full=ATP-dependent DNA helicase RecQ; EC=3.6.1.-; chromosome CDS358838 1881 - 0.397661
recR TDE1549 recombination protein RecRRecName: Full=Recombination protein RecR; chromosome CDS1592280 588 + 0.438776
rnhA TDE2570 ribonuclease HIRecName: Full=Ribonuclease H; Short=RNase H; EC=3.1.26.4; chromosome CDS2597515 483 + 0.447205
rnhB TDE1547 ribonuclease HIIRecName: Full=Ribonuclease HII; Short=RNase HII; EC=3.1.26.4; chromosome CDS1591264 597 + 0.358459
ruvA TDE1863 Holliday junction DNA helicase RuvARecName: Full=Holliday junction ATP-dependent DNA helicase RuvA; EC=3.6.4.12; chromosome CDS1888064 606 - 0.438944
ruvB TDE1914 Holliday junction DNA helicase RuvBRecName: Full=Holliday junction ATP-dependent DNA helicase RuvB; EC=3.6.4.12; chromosome CDS1930979 1032 - 0.516473
ruvC TDE1864 crossover junction endodeoxyribonuclease RuvCRecName: Full=Crossover junction endodeoxyribonuclease RuvC; EC=3.1.22.4; AltName: Full=Holliday junction nuclease RuvC; AltName: Full=Holliday junction resolvase RuvC; chromosome CDS1888662 537 - 0.426443
ssb TDE1677 single-strand binding proteinRecName: Full=Single-stranded DNA-binding protein; chromosome CDS1729773 507 - 0.455621
tdeIR TDE1268 type II restriction endonuclease TdeISubName: Full=Type II restriction endonuclease TdeI; chromosome CDS1303110 771 - 0.29572
topA TDE1208 DNA topoisomerase IRecName: Full=DNA topoisomerase 1; EC=5.99.1.2; AltName: Full=DNA topoisomerase I; chromosome CDS1240327 2166 + 0.371653
uvrA TDE1010 excinuclease ABC, A subunitRecName: Full=UvrABC system protein A; Short=UvrA protein; AltName: Full=Excinuclease ABC subunit A; chromosome CDS1035367 2865 + 0.464572
uvrB TDE1369 excinuclease ABC, B subunitRecName: Full=UvrABC system protein B; Short=Protein UvrB; AltName: Full=Excinuclease ABC subunit B; chromosome CDS1409894 1989 - 0.42735
uvrC TDE2478 excinuclease ABC, C subunitRecName: Full=UvrABC system protein C; Short=Protein UvrC; AltName: Full=Excinuclease ABC subunit C; chromosome CDS2501013 1959 + 0.444615
xerD TDE1205 integrase/recombinase XerDSubName: Full=Integrase/recombinase XerD; chromosome CDS1237829 825 + 0.349091
xseA TDE1017 exodeoxyribonuclease VII, large subunitRecName: Full=Exodeoxyribonuclease 7 large subunit; EC=3.1.11.6; AltName: Full=Exodeoxyribonuclease VII large subunit; chromosome CDS1048075 1197 + 0.440267
xseB TDE2066 exodeoxyribonuclease VII, small subunitRecName: Full=Exodeoxyribonuclease 7 small subunit; EC=3.1.11.6; AltName: Full=Exodeoxyribonuclease VII small subunit; chromosome CDS2092046 237 + 0.400844
xth TDE1734 exodeoxyribonuclease IIISubName: Full=Exodeoxyribonuclease III; EC=3.1.11.2; chromosome CDS1788753 771 + 0.426719