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# Treponema denticola ATCC 35405

>TDE2472 ISTde1, transposase
MEEKLNMGKKERTRGKILAMVVERQITLKQAAIKMQVCYRQAKRIYKRYL
EQGDKGLLHKSLGKPSSKRVDENIKKKCLELYAEKYHDFGPTLAAEKLEE
LDGIKINHETLRRLLIKAGLWSRKRRRNIHRSRRERRECFGQMLQFDGSH
HKWFEQRGPKCCLMNIVDDATGMTQSFLTEQETTEAAMRLLWGWIDCHGI
PQAVCCDKKNAYVITREPTMSEIIKNVRPKTPFQKACEKLGIQIIVAHSA
QSKGRVERNHSVYQDRFVKELRLAKINTIEKANAFLQKEYLPKINKKFAI
APLDSQDGHAPCPSKEQLANIFCYEEQRVVSNDFVIRYENRLFQITKSNR
NIPRPKTNILLRELLDGTIKLIWNNKELDFLEITKEYLKEVKLS
>TDE0170 nuclease SbcCD, D subunit, putative
MKILHTADLHLGKSLYESPQIERQKKMLDDIHKILLKDDYAALIIAGDIY
DRSIPPAEYVALFDSFLSAVHKDCPNTAVFIIPGNHDSAERLSFGSKILS
SSNIHIAAGIGKLCSPIIIAQNGEKVQFFLMPFLHLGSFSEENSELKLTS
QSEMAQEASRRLKEAVDPSMPSVLAAHIFTLNGESSSSERAFLGTAEYVS
PALFDFFTYTALGHLHKMQKVTDRMYYSGAPLTYAFDECSTEKVVLSVDV
DCKTQGFPVRVEKIPISPLRKMSRLEGSFFEFFNTDKFDAYKDDFLEINL
TGSAVIQSPMSLLQQKFPYLLNLHQEAVAAELKDEEQIHILKKNIEDEDV
IFENFMLFEKTIDEEPSAKKQELFKSLCKEQFT
>TDE2219 membrane protein, putative
MSILFYAEPVLSFLFSILLIIKNASSIAVIAVVLGAAYSLWTAFCIFSFF
KKKIVRDMFIMRKTMEYVPYIFMACFIISKAVQAEQDRSVLDAILAVYWF
ALVIYNRVLLFRLKDKRLPKYFPELPAIPKKKRSLISEILDWVDSILQAA
CVVLLFTVFVLQLYVIPSESMVQQFMIGDRVAGFKVAAGPTFPLSSFRFP
QIYNYKRGDVVIIRNPHYEDDPNNELKFFTSQLVQYLTLTMVNINKDENG
KIKADPLVKRIVGLSGEKLMLVDGVLYIKKAGEKDFKVFDESAYAVWDLS
KLPQSSLKYVKDVKMNTEDLNRLQSVEAWRAKVDFDEAEKEALALIKKMK
EIKAKPDKVFSAKDFLNKGQYLVIQMARDNEAIASKILTTDGGLMWFENF
LTSWKKSAEKNSYNLYEMRNAQLNVLIKLGFGKLLVRNAELYKANVSDAV
FSSDAERQAIINELGEYLYYLALSSQRNMDEFPKGEEEYIPENCYFMMGD
NRFNSTDMRHEYQYHLEALNKDDAMSMMFVTNVAPRYIHSSRMLGTVNLI
LFPRARFGLVR
>TDE1891 conserved hypothetical protein
MLKKFEDLTLQDDFMFCKVMQNPDLCKRLIEMILADTIGKIAYISVQHNI
NTYEQAKSVRFDVLVQTENGKFYDVGMQVSNEKNILKRMRFYQAAIDISF
LDKGNFYSDLNDSFVIFICLFDVIGKNRPVYTFENICLEDKNTSLQDGTK
KVIINSEAFKDAKDKELKEFLEYLKTGKAKSEFTRRIEEMIQTVKQNEQA
RQEYRLMSTFEMDARYKGIYENKRETAKILKQLGDSLQKIMQVTGLTESE
IEKL
>TDE2491 DNA polymerase domain protein
MKAEEKKTLYTFFRTASEYLSGFKTDEEYPDFADTVLSETAIPDTALPET
DEAAGLTIPLSDTDSESGFESLEKVYAQIASCKACRLCERRHNTVAGEGP
CEFSNFDNKIEVMVIGEGPGADEDAQGRPFVGKAGQLLDKMLAAIELYRT
HNCYITNVVKCRPPNNRDPLPDETAACRNYLNAQIALIRPKAILVVGRVA
LQNLLETQEGIGKMHGKFFEYQNIPLMATYHPSALLRDVNLKRPAWEDLK
LFRSRLNELSQQID
>TDE1881 methyltransferase, putative
MRITGGSLKNRQVECPKGIIRPAMDRMRESVFSILGDLSGLSFLDLFTGS
GVCGLEAYSRGAYPVYLVEKDADKFPVLLKNVSMADKKLECKRMPAETFI
KRAKESFDIIYLDPPFPYKFHIELLEKIEESKILKEGGLVMMHRPSEKAM
PQTIGSLTKSDERVYGRSIVDFYRKKIPGENDV
>TDE1137 conserved hypothetical protein
MPAIGWVVILIIGIIVIPPLFILLLKKGGKMSILGQTIEVYEGGKIQKID
SIGLMYLMKDNCEKIELLRKERIEDILPDLSYLLSDISVLACCMYRAESI
LNKRLYKNGFEELTVDSVNSYIKQLAEELFIRLNKEILISKSCTTRPLNE
LKKEKIYFIAQDFTKRVTRIYLKEVKSKADMYLNYKPLFEKIGDKIRADF
CRDKMEKKLKQAENLRAVLEKLTRNTV
>TDE1621 conserved hypothetical protein
MYLSEIKLWNFRKYGRNDFDINVPHLVVPFHQGMNVLVGENDSGKTAIID
AVKLVLKTQSYEWLRVTDDDFYNESDRLRIELLFEDLTDDEAKNFIEWLC
YKKQGNQPAVIYLRVVFEARRNPKTKKITTTDIRAGEGSALYLLTSEARE
YLKVTYLKPLRDAENELMPGKYSRLSNILLAHEVFTKEETHENFINHLQE
FNLFVDNFFSGNDEMQISDTEGAAIKEQLDEYLQSFCFNDEKARFSMSET
TLKSILGKLQLSLEKTQNPGLGTLNRLYMAAELLNLQRKNWDGVKLGLIE
DLEAHLHPQAQLKVIEKLQRLKDVQLILTTHSPNLASKINLKNIILCANN
TCYPMGHEFTKLSDDNYCFLQTFLDVTKANLFFAKGLIFVEGWSEQVFLP
SFAKLLKKLGMIKKDITQAGVSIINIQSIGFFNYTHIFQRKNNNESIPIP
IAVITDSDVKYYEKDKDTAEIRIKTDIEIEQALSEKMTKLTKKYDTNNNI
RLFVTKEWTFEYALYKSTVFGNLFEETVKKVHPRITSDSSSFEEALAQKL
LSDSLNKRKIAYLLASGLDNVFCSENELKSDAAIQNFIEAVQFVCK
>TDE1450 MutS2 family protein
MTEHTLEVLQFSRIREIIASYCVTDEGKEFCLKKNPDTDIKKIEEEKKLG
IDFLSLLRAYKAPPIKYRPPVLPFLEGIEVEGAALDIEGVYSVGLLALSV
FSLHEWLSPFLENEDLNENSIVSFVKKIPDMLHLKNLVFSFIDENGELQD
LPSLRAIKNKIRSIEDDIDKTMRNYFTNDATRQMLQSNLPTVKDGRQVIA
VRSNFKGRIPGIIHEYSQSGQTFYLEPEEIVLKNNDLIAAHAEYERELLR
LLQDLTSQIAEHTENIKEACEAITKLDCVAAASRWAHSNNCVFAGSIDLG
LSHSIDKDGSHDSKGTPLAFYLHQARHPLLGKSAVPIDLKLSKDDRVLII
TGPNTGGKTVSLKTAALFALINQTGWPVPAGPLTRLPYFDFIACDIGDEQ
SMDQSLSTFSAHMKNVSEIIRRAGDKSLIILDELGSGTDPQEGCAIAMAV
LDDLLEKKAFVFVTTHHGALKNYGYSKESCVNASVEFNQNTLSPTYRILM
GVPGESHAVDIAKRNGLPEHIIEKAHTYLGNNRADVSDLIKGLIQKHEDL
NEFELQKKEEELKLKEDRRRSDLKELQLKQKELELKKDGIKRLDLFFEEK
RKFLENLVRELREGELSREKTLSVKKWIDDFEKDLDKEHEALKLEQTKID
ERLHSSKEKNKAPQNPELREGTRVIIKSLNRNGELIREEKKGKWLVAVDN
LKLTIAEDDIEVCENQEKLKLSKPIVSIISDTSAPSSRPSFELRLLGMRA
EEAQKALQDQMDLALVHGITEFAIIHGKGHGILQELSHDFLKRSPYVKAF
RFAKPEEGGSGKTIVSLG
>TDE2588 integrase domain protein
MGLDMKMKKKLTEETAKRYCTAGKKQKTKILDEFVATIKYNRKYAIHILK
NSAYVKVTHFNNAAKKSVQIIKETRKKRNYEKYYGQDVQEQVIRLWIFSM
YLCSKRLVPFIRDNIDYFAQKFGYSEQLKAKLARISSATVGRILKPEIPK
HSIRGISTTRPAKNLNKLIPIRTFFDWDERKPGFFEVDTVANCGISTKGQ
YICTLTLTDVHSGWTENRALLNKAHRWVKEAIEDVKINLPFQMKGIDSDN
GSEFKNIQLLQWCNTNNVIFTRSRSCKKNDNCFVEQKNDSVVRRIVGYYR
FEGEETRSVMADLYEQYNMLVNFFFPSMKIISKHRVDAKVIKKYDEAKTP
YRRLMESSDISDAEKNELQCRKDSLDLQQLIDKTQELQSKLISMAQRWST
>TDE2721 helicase domain protein
MQESKPLIIQGDRSILLDIHDPEANEARFALIPFAELEKSPEHLHTYRLT
PLSLWNAAGVGLSADSIMKTLTGFSRFKVPDSILVWMKETMGRYGKIKLL
PLEKPQEEKNGAEEKTDVEESGENQADGIRHETPDAEFLRLKPENALIFK
ELKSSKILLKYLIEDPDEENSFLISLLNRGTVKQALLKQGWPVQDEVPLR
DGEPLDISLKEKTSSGAEFEIRDYQRDAASSFVGDKSAGTGFGTIVLPCG
SGKTIVGMLTMSLLKTSTLILTPNVAAVYQWRRELLDKTNIKDEDIGLYT
GEVKEIRPVTIATYQVLTWRPNTDAAFPHFKIFRERAWGLIIYDEVHLLP
APVFRITAELQVIRRLGLTATLVREDGCEGDVFSLVGPKRFDVPWKDLEQ
KGWIAKAYCTEIRVNIAPSKEIEYAVGTTREKHRIASENPAKLEIVKKLL
TKHKENQILIIGQYLSQLEAIAKEINAPLITGKNTNAERELLYDSFRKGE
INVLVVSKVANFAIDLPDASVAIQVSGVFGSRQEEAQRLGRILRPKECDS
HFYSIVTRQTIEEGFAEKRQKFLAEQGYDYSILTEAELDK
>TDE0099 adenine-specific DNA modification methyltransferase
MGVFTWEGKDKALSELNLLLKNQSKFSFTENKVKSFNSEDAKNLYIESDN
LYALLFLQKDYKDKIKIIYIDPPYNTGKKFTYADNFQTKTEWMNYLYVRL
SLAKNLLTDDGLIFISIDDKTCPYLRIILDEIFGTKNFISTLVWNNSTGG
GLRKKHINTSHEYIILYAKDKTKVKPMTAPMPEKAKKMYKYKDADGRFFR
YQQFAWKNKTDAKRQKYPIKTPDGNFIIPKAGYIYRFVEKSFFNLLEKNL
IEFKKSDKSVFTDIKGRPTKWTIYVKTYLEKKEETVPKSLLPAEYVKTNI
QSVYEQKVLFGAKIFDYAKPVSLLKYLFKLVPNSDDAVVLDFFSGSATTA
HAVMELNAELNENRKFILVQRGEPCSEDSPALKAGFKTIAELGRERIIRA
SALIQKRFTQKTFGFKYLELSGEQGFIF
>TDE2266 reverse transcriptase family protein
MKRKGNLYHKITEWNNLIAAFYNASRGKRLKPDVLLYEKNLYTNLKTLQN
YLINQTVLLGSYRFFKIYDPKERIICAAPFNERVLHHAIINITESVFEKF
QIYDSYACRKNKGTQAALLRALYFSRRFKYFLKLDMKKYFDSIPHSKLSL
LLTCKFKDKALLHLFNKLIASYSVTEGWGVPIGNLTSQYFANFYLSFFDH
YAKEKMNVRGYIRYMDDVLLFSDNLKDIKLIQKKAKNFLSCELDLTLKEE
IIGMVKNGIPFLGFLVKPQGIYLSQKKKKRLKKKIKDYVHKFKIAYWTEE
EFALHITPVFAHIAISRCRAYCNKYLLT
>TDE1875 hypothetical protein
MFFYRVQDKVSMTMSFFVMAACIIGIVLVLFFASTKLRKINAVLAIVLST
ALSCILMIPLMTAFNSFVNKKVVNEVTDSQLAEIEARKAQIKLLAANQEL
KEKEKEILDNKINMQKQSIEISGLEDSLRVLQNTQLNMQSFKEILELGLL
EANLKQTNLYRKQLSGISTGMGLKADQYYDEGLVILTHDIDAKFGVDLKK
IKITVSKDFPNILWIKDIQPKFLGASKNKHIKEVAEIRRVDIKNNIKTYN
ILNGQSEVKKANQYADLCEQEYQTRLSQGLETNFMNDAVLKLAENFIKLI
LSPLKKEIRFDSGLDGDTMSLEEYIETELKEIQAKRLELEDSNKTLDAET
QTKEKELENLKSKIGN
>TDE1991 conserved hypothetical protein
MVKRFEDLTFTDDFMFCKAMQNPDLCKGLIEMILADTIGKIAYISIQHNL
KNYEQAKSVRFDVLVQTENGNLYDVEMQVSNEKNIPKRMRFYQAAIDISF
LDKGNFYNDLNDSFIIFICLFDVIGKNRPVYTFENICIEDKNISLQDGTK
KVIINSEAFKNTEDKDLKEFLEYLKTGKPNNEFTRRIEEVIQTIKENEQA
RQEYRLMSTFEMDARYKGFSEGLKQTAKNMKMEKLDISLIKKITGLSESE
IEKL
>TDE1207 DNA processing protein DprA, putative
MKISEKESLYIGLSHCYFLKGREKLVLSEKLDSLSSLVSLSLKDISEIIG
RQVRPKKWDKDLLKSLTDSSIKLMSSYGIRMLYFYDSDFPPQLREIPDHP
FTVFYRGLLPSPEQPMLAMVGTRRPTGDGIEQALNLGKECAEKNIPVVSG
LAFGIDCFSHKGCLEGEGKTLAVLACGPEMIYPRSNKKLAANILESSGCI
LSEYAPGTEPLSYRFPERNRIISGLSRSVLIVEAPKKSGALITADFALEQ
GRDVYVCGLLLNSLQNEGGKALYEQGAFAIKSIDDILHDWKYPTENNLRN
NQQNMLFTNL
>TDE1990 ATP-dependent helicase, DinG family
MEYFDDDYFDDEKIYPLDPKTVSSLLEEDGPLASFFERYEAREPQLALTK
SICRCFNEEAIGVFEAGTGVGKSLAYLLPAMMWAKQNKKRVVISTGTINL
QQQLIEKDVLTAKKILGKGFQDMKACLVKGRHNFLCLRRMTQALRENDFF
TEGQEELDKIKEWATETKDGSRSDLDFMPTEKVWSTVCSEPDNCPMNKCP
YFSGCFVMKLKREAENSSILVANHHILFADLSVRAEGFGYQGTAVLPSYD
NIIIDEAHGIEDAAQSFFSSDISRFALHKQINLLYRFRRGKQAGILSGIV
SISKKAELFTEIINLLEVAAASFNILEEQALQVLQTYQSKSLAQTSSDEK
EKLLSCVDNFFKNINNLNIKLENLINAADGEEDEEGYIREGLVVLRRLKK
MASVMENFLNSSEFPNDVFWFEKIKTSQGEAVRFIQTPLNLAPIMRRSVF
MPMATVICVSATLKIGDDFNFWLNRNGLYNFTEKKIIKDFFPSPFPYEKN
VVFNIPTDMPMPDENNFQDAVNETVLALLEITQGKTLILFTSYDSLQKTC
EYVREHIDEKIKILKQGEADRMQLLYEFKDDVTSCLFATSSFWAGVDVPG
ESLSHVILVKLPFAVPTEPIFKARADLIEKSGGNSFMQLSVPEAVVQFRQ
GFGRLMRSNTDRGIVTVLDKRILVKRYGSIFIQSIPQTIQCFSETKAVLN
KIEDFLYNN
>TDE2587 endonuclease/exonuclease/phosphatase family protein
MKKLRKILTLSIFICFCFILCACTGCTNVFRLQNIGKDEISIVSYNAQTF
FDAVEDGREFKEFKGSKTKWSKEKYAERLFRLKEAVNLSCLALGLGEKAI
PDILVLQEIESRAVIDDFCKILPMNNSYKYAVFIPPQNGGAFSTALLSKF
PITETKVFNVYSGKRSLRPLIETRIRIGNSTGDNELVLLNVHWKSKVGNS
DTDSIRRQQEEQAYKRLKELKASEPQTPFIICGDFNQTLEEFSLLSEFDN
CWNIEAYRAAAQEGSQPAGSYFYKESWEGIDHFFYSDNLSDGKNFDLSFF
CVINLKPLTDTSGKPDKYSVYSGKGYSDHLPIGIILKRQ
>TDE0010 MutT/nudix family protein
MEKNNEIVWKPTVSREILKTRVFSVCEKDSISPEGEKKTFISLKAPSWVI
VIPVYQNSSGEDIFVMVQQWRHGSESVCIEFPGGVVDKGEKPEDAALREL
LEETGRTPKNIKCLSTLSPNPAIMENSCTVFLAELDKGEVKQNLDEDEFL
NILEIPVKKVIQNMGNPPYTHAIMNAALFLYLKEKQYH
>TDE0663 conserved hypothetical protein
MAQINVNIRMDSEVKQEAEQLFDSLGMNMTTAFNIFIRQSLRIGGIPFKI
ISDERGFYNKYNQKKLHAAAKRMNEGKYIVHDIVE
>TDE0938 conserved hypothetical protein
MLYCKTLMNDFIALCAVGAEPVLTRELKLLGFKPYNRLPGRVFFTSAEAE
PLLAFFKANYFLRTADRVFMLINTAKAENFDDLFDLVFSIDWHNYFPRDA
RITIDKVRTYKSKLSSEHAVQSIVHKAVCDKLCKKWNMHSLPETGTRFMI
RIYIENNNVYVCLDLSGEPLYRRGYRLSGGAAPMRETLAAVLIQLMQWKR
KIPLHDAFCGSGTIPIEAAWYAYNIPPGIARHFAFENFICFEKEKIEAVL
KEEKERAASEVRTDCLARITGSDISEEAVSLSKANAERACIIAGRELHAA
GITHHIERPDFIQSDFSELEAPYDSGILLSNPPYGERLGSEEEAFELYKR
MAEIPQHFPNWKLGFITSKKEFEKIFCKQNKDAVLKKHSLRGGNMETVLY
IME
>TDE0227 adenine-specific DNA modification methyltransferase
MKQQFKSIYFPSYYQNKQGKSITISFSNKEKDLFLLFSNKTNNEIRTLIN
VLYLENLIDYAKAENRNLSQYIKYHISEKLNKCIYGDMTFRTSKDIPFQR
WYNYSEGYSIDFVNSILEKYFSDSKILYEPFAGTGTTIFACNNFNKDCYY
SEVNPIMAYQIQAKLEFFRLSPKNKEMLLEDVEIFKNNFQHLILLQEDAE
LKKNYYRVFEKSIYFTDISFSFILKVKSIIKKIEDENPLLAKVLTITMIS
CLMHISLLKKSGDVRFKTKKELEKEDIHPIEVFNNHFRIIVEDIISYNES
FKINATQILFNSKKIEYMKNIQFDGIITSPPYLNGTNYIRNTKLELWFME
FLKTKDDLRFFRDEIITSGINDVILSNRNKNLKGISKLLDKTINNLKSNS
YDNRIPVMAEHYFYDMYKTFLSIREYLKPNGKIAIDIGDSIFGGVHIPTD
LILIEILLTLEYKLIDSVKLRERRSRSGETIKQILLIFTNNSKQDIKKKE
DVYVPKWEEKWSFFKNNIPYQKIPYSKKNWGNKLHSLCSYQGKLKPSIAH
FLVNTFVPENGSILDPFSGVGTIPFEARLNNKYSFSFDISLPAYYISAAK
LGKIDKNTLKNKIINLDNYIKNNSLNSIELEKYNDFGFNGKIPLFYEPNT
YKEIILARKYFQENLPNDTHDFFIISAILHILHGNRPYALSRRSHPIVPY
SPTGEFVYKNLIEHLTNKIDKDIEDYPKNDFLGHAYLQDSTKFWPTNINN
LDAIITSPPFFDSTRFYLANWIRLWFCGWEVNDFQTKPHSFIDERQKFSF
SVYESFFMQSRERLSKHGVLVLHLGKSKKCDMAECLIKTANKWFSKYDLF
TEDVSHCQNFGIKDIGTVDKHQFLILR
>TDE1752 ISTde2, transposase
MNQKNDTIKSKKWKHLSEKERYAIEALFKSDYNARQIAQSLNRDRRTIQR
EIKRGMVIKVTENPYVSRNPKVPDYLEKTVYSARKGQQRADKMKLLKGRG
LKIGKDKKLLHYLETCIADNKFSPDAAIGQIKELGLQFPVMICTKTVYNM
IDRGDFSRLTNKDLPVKRNKTKRKYKKISKIAKNNIKGRSIEQRSEQINK
RQEKGHWEMDLVIGKGRCCLQVMTERVTRKELIFKIPDKKQESIKKNIDM
LEMKYKDEFKEIFKSITMDNGTEFLDQEGLETSCLKEGEKRTTCYYAHPY
SSWERGSNENANKLIRRFIPKGADISKYSDIQIKQVENWINNYPRRMFGY
KTANQMYT
>TDE1971 DNA polymerase III domain protein
MFENLIDQEAGLRLIQDIKQKKLPPSILFSGPECSGKLTAALELARSVSC
TESGNWTCTCSSCLRQKEMIAPDVLILGARDHSPEIKAACETLLKTKTLS
SRYLFLRAIRKLTARFDPRLWDTDETRFVKAAPVIAEIEELLADLCSGPI
ETIDDNVLNKTAEALVLKAAKLQDECMYDTIPINQVRKASSWVRLMPSGI
KKVLIVENADKMQEGARNAFLKILEEPPSYAVFILTTAHRGAIMPTILSR
VRTYTFKERDKKSQEEVIRRVFKGEPCHEPFGKFNLLSSYLYGFLPVSFR
AIQNAAALFYEYVFLLIDRQNKILPSALYNSISNYKNKNKYDNSNCTVSN
IVNLLNKCKPHTIYILFLNSLLFFLQDGLKNEECSALEVESYFKITALIK
NAEAAVDIFNISPQAALENLAEEIKEKLI
>TDE0266 conserved hypothetical protein
MRDLISQYNEKKVILFVGAGVSKNLKLPTWSELIDQIAKDLDYDPDVFKT
YGENLALAEYYRIIKGNIGPLRSWMDTNWHANGINISDSKIHELIAKAKF
PIIYTTNYDRWLEKAFDAYSIAYTKIATVSDISKITDGVPQIVKFHGDFD
YDATLVLDESSYYERLEFETPLDIKFRSDVLGKSVLFIGYSLSDVNVRYL
YHKLKKLWKANVYGGVQPKSFFFTNRSNPIQAAILEQWGIKMIVSEEDNP
QKALEVFLAKLTT
>TDE1999 DNA polymerase III domain protein
MSSYDWISAVYDKAVFTAFDTETTGTEAKAERVVEIGCVKFDIRGVIARY
NVLIDPEKPMPPEAGKVNQITDEMLAGQPKFAEVLPDFLDFIRNTVLVAH
NASFDINFINCELERCGKTKLTNKVFDTLTFARETLPGLQSYALQNLATQ
FGVQAVNAHRAEDDARVCMEFFKIAVSHFFEKNKDMLDYYKKDVDISEYL
STKDPETDGGKLVQNLF
>TDE1611 conserved domain protein
MTSKKRPAYNSRKEHVHPFEAYVLENTNTLILGTFPGKKFTDPNKENDKE
DWYYGTDRNEFWALIEYALGCKRNSLQTKDEKQKFLTEHKIGITDIIKKA
RRRQNNNLDINLNVIEITNLDFIIDKCKDIHMIILTSKDMYTRFFIPYYV
KKYNAIFKEDKNKEPETHEEKGKKINIYYYTFKGRPIRVVPLHSPARKNV
SIKIKKALYKYILKNNK
>TDE1844 DNA integrase
MTTEIIGERNNHTATDIQSILNKLEEVITAKHYSKRTMEAYSYWISRFIR
ENKNKNLKTLSDTEINAFVSRLAVKEKAAASSQNQALAALLFLYKNILGL
TIKTPENIVRAKKPKKLPAIMTREETAKIFSLLPENDYGLLIRLLYGTGM
RLMEALRLRIQDIDFGKNEITVHCGKGAKDRKTVLPVSLKFPLQKHMEKV
RLIHEADCKEGFGSVPLPFALAKKYPNASKAWAWQWVFPQARRWRNKETG
EQGRHHIDPSVIQRTLHEAVLRSGIPKPIGCHTFRHSFATHLLEAGYDIR
TIQELLGHSDVKTTMVYTHVLNRGGLGIQSPIDRM
>TDE0435 ATP-dependent DNA helicase, RecQ family
MKNQNLQETDELYRWEDTPDDLYCPFVCETDNPEYSLEKTEDAVAVCAKN
VFGIPSLYPWQRLAIANILDAVHAVEARIEAEQTELKNKDGEDSDKEEKT
KLLQKITSNTEDEKITSLYDEDGIMRGRQIILLPTGAGKSLCFQVPALLL
DGPTVIIYPLLALMSDQFRRMAEGGLEPVIFKGGQTKEEREAQLARMEGS
DGKPPAKLIIANPEVLSGGTLIDRIAACNVVHLAIDEAHCVTEWGDSFRP
AYLELTNIIKKLHPYAVSAFTATASPPVLQRIAEILFEGRAHLVRGESDR
TNIIYFVKHCRVKNPALLEEVQKRKRPMVIFCSSRKGTEQTASFLRLRLN
DENIRFYHAGLEREEKAETEKWFHEHKSGILICTCAWGMGVDKKDVKTVI
HMDPSPTAEAYIQEAGRGGRDGSIAEAVLLWSPADKKRIELLPEKQRLRA
GVLKDFAESGKCRRAVLLKALGETRAEASNPDEEVIACSGCDICNKTAVQ
YPEDEKLFIKLIKANKRIFTQNEAIDFFSSKKIFWEAGDVKRLSAELLQE
GLIKKLKTPLWKDKLSV
>TDE1654 ATP-dependent helicase HrpA, putative
MLKIRCQACSTILEASYKISYNAQDMKYKNLPVYEQKDRILEMLEHNQVI
VVESPTGSGKTTQLPVILHEAGYSRSGMIGVTQPRRIAALSVSEFISKQL
KEPMPGLVGYKMRFEDKTSNDTKIKIMTDGILLQELKLDPWLSKYSVILV
DEAHERSLNIDFILGLLKRIITERKDFKVIISSATINTDLFSMYFDGCPV
IKIDAITYPVTLIFDPPAVKASTDTQEAETALMDKIASIVGRILSEGRSG
AILVFLPGERAIKDCIERLSKEPWYRKLFILPLYGRLSKEEQERVFKSPP
FGKKKIVISTNIAETSITINDIAAVIDSGLAKLNFYNPFTFTSSLDETLI
SRASCNQRRGRAGRTQEGVCYRLYTRKDFETRQLYTLEEIYRTDLSEVVM
RMAELGILDFENFDFISPPGKKGIIGAIDTLNMLDALESDRSLSSIGKMM
CLFPLAPRQSRIIVEAITRYPDLVEEVLIAAAFLSARSPVIFPEGEEIEA
RKAHALFDEPLGDFASFLKVFRMYSQALDKERFCKIHYLDDRVMAEIANI
KEQLELIVSDMGVPILSGGKMEHYLTAIAKGMIQFVCSAQGRDSYRSLTT
EKIFIHPGSCMYKEKEQFIVAGEIVRTSRMYAMSVSPLSKKIIEEVAPAL
LERKDKRAKKEKDEHRADQKEEKKKPEEESVLIEGTRYLIKKIKGKKHLI
LPWKEFKLTAEAVFKKYSEENQNGALEQLKGLRGKIEINKSELLSGEKMD
LILNVVNNFNIEQIEKTEDEKHFDRNKNYFIEEDLEALVNSLNLLFRTTI
AKKTTKQLGFITLFCDGTGHFWFKTSRGFHTALHESLVSLQSLIDLAGEN
FNEDQKIIVRTIYGKMNKMI
>TDE0006 Snf2 family protein
MARQTYGTTPWGAWFLDMLKAYDDSGRLSRGKTYANTGKVNSLVVNGQTA
GAKVKGNYSPWYHVYFKFPPLSKTNKTAIRSILEKHPIELAGLRAGIMSP
ALIEALKKKKVRLIPARWNLIERDCTCPDSGDPCKHMAAVLFLLAKEIDH
DPRLLFKLAGFDIDSINVPETEVFEKGGTQKLGLLQEQPVPLSLRKNETL
NKAADLSSDSSVSETAHNSCELQSPLKFSLGESYLPLITNILPPEPNFSS
SDFIIKLTEFYHKAVLNYGLNFYGQEKQSEKQEEKSVNPFLFARVKVNID
NIRKQKRAFPLEPKSPLTVNIKLGETHEINQTLLQAQNFYKTRNSLNEMS
PSVKILFSLFALAGKLIQSSAFIPAVFTENKKLFIFWKSLSASSEIKADI
FKFAASLTKDFFLPVGKWGRLYCAELLLTALLTEYAASLKFFPNKSYTKD
KEIDKLFFLNEEIDISVPGKRNLDTVIYSWLSVLNYSNCGYEYRLTLEAL
KDDEFFLLSALVRKAKEKRIEAGDDSFALEAEAPFAELNTAAKRSKNPDD
ILRFPATLAAYLPALSILAIKKNVMLSREETGLFLQKSAKLLQRFGIDIV
LPKSLKNILTPKPVISVKSVKGAGNIVSFLNIDDVLSYDRALMLGDTLID
IDEFKKLFLNKSGLVKFNDQFLLLDPEEVAKMLKALEKPADTKEVLQAVL
SGNAVCSKPASEIIKNIFRQEEVPVPQNLNAELRPYQKQGYRWLYANIKS
GFGCLLADDMGLGKTVQIISLMLSFKNSKEAESPFLVIAPASLLSNWEHE
IAKFAPSLKTAVYHGAGRKFTTEADVIISTYQTMQKDIEKLKDKKVFCII
LDEAQAIKNSGTKKAHAVKAIQARGRVALTGTPVENNLEDMRSIFDFFLP
GYLGTADEFRKKWRIPIELHNSETEADDLKKITSPFLLRRLKTDPKVISD
LPDKIITNQYCNLTPEQLAIYENLVETELHKVMGAETKIERQAYVLKLLT
ALKQVCNHPRAYDKETPIEMKYSGKAAVLIELLNEIISSGEKAIIFSQYV
GTLDILKNIIQKELGTEPLLLHGQMPASKRKKAVEVFQTDSAYRIFLISL
KAGGTGLNLTAANRVIHFDLWYNPAVEDQATDRAFRIGQTKNVFVHRLIC
SGTFEEKIDEMIQKKREISGMSISAGETWISKLSNEELAGLFKS
>TDE2682 conserved hypothetical protein
MVRLNQIQEKMSEMHELDSGRFFVDISGETLDEALANAAIQLGMPVSSID
YEILQKGASGFFAIVPKEWKIRAYETVKVKKPQNIEDEKVETEDIIEDGT
VINKDGMGYVFCAADGIYFKVTAPSGTGHAFDIKAARNKFRDRALPIPED
DILNPILEEKTGEYVRVAPYKRIPGNDAAMVVNISDDEMKAYLYVTPPTT
GGVDLSADTIIAFLKNNRIIVGINEERVKQFQDSPVYREDYLVAEGIAPQ
NGADAKIIYNFEVDNTRVRLQETRSGQINFKELNLIQNVVEGQPVAQKVP
AQRGKAGKTVTGKYLEALNGKDVAMPVGKNTKIAADGLTIVAEVNGQVLL
VKNKITVQEIYVVEGDVSIRTGNITFLGSVFVNGNVDDGFVIKASGNIEV
KGSVGRAELDTEGDIVVSQGIMGKEGGVIRAGKSIWSKFIQNTDVVEAGD
MVIVSDGIIKSNVMANRKIICRGKKADIISGNLSASESISARNLGSVSGG
NDLMLSVGFDPKSKERLNFLLQKQEMDQKSLEDLKLNLMSLEELKSKRGE
LPKDKEENYNKMNEYKYTLQTDIHEVQKEITQIKEYLNTLKNQGRVSASG
HVYPGVRIVIRDTTEDVRMDCKATTFYLDKGIVRYGKYQEENEEDFKKVP
SGYSTN
>TDE0721 hypothetical protein
MKRIGLILIFFIFPCLIFTESRDWDVFFNERLSYSLSASLNDIEFKKIEL
LEYKEKTKWIPSLSFDFPKLFAWKNIPVELSGANSLIKTKYIDVFNGKYS
LVLNQALPSAGNILFSFNFNYEYLLQSKEFKQIPSFTIQFSQPITKYSFG
FVNEAKKISFLKKSVKEKRFALYADFIKIFLKSALNIEVLNAESVYLKNK
YLYAAEQYSTAEIEFKKERLKLDALLQIKQKMIEAKQEYGLNLNSLNRLK
EEFVLNYNYEYSLINEEDMSSLLEFLENLFLDSYIFDIQNTEYEIFLLNA
EKEQAYIKNAPRFNIGFSHAPNTLKTRFSSYTASWQNLKQTEWLPELFIS
FSWTPDYTFTQKKEIDLIDLKISYAKNKLKTLKEKKEIKNKAKTLRIKNL
KEDLHILSENLNLYLELNEEYKKLYKDGVITNLSLLEYTVNPSRQRLLKL
KKLKDLIFEIF
>TDE2463 hypothetical protein
MSKKIKAIGFFVTAILVFAFACEPEMLYGTAKVAGSTPAGTNYEYGYSVC
IDVTVDDQGKIIKVSDDEKNTEASIAADVIGAAASNKAYWKKYLSGKGFE
KYKNLTIEDVKKMNVGFPGAPGVDAVGGATAASLAVKNAVLQALVLDASL
KELVNYKNPDNYKKGEQKKLEKIVKEGRTHLETLETYEEIEKALAELKQK
LDALKTK
>TDE2221 conserved hypothetical protein
MKKILSFGFLLFFLFTAEGFKLIAEEKSAWEGTESGDYLIYQDLSWKEPT
WAGFLYYNDNTIGSFVYTSNGRTVAKVLFSGEILDGEFVITGQNNISGIN
TDPSYTYAINYLMGMLPKLYAWKSQNLIESLIIKTGSKTVDEEQFGGESE
VKFQSYIPLFHVKEILDSNKEKAFELVEMGKIRDEKTFFDFKPLEDAKPL
ESKFVLNSKAKKETKTVDGVKLSLDSQWKQIADNTFLMGNEAFLNVNTID
LKTRPDTKGKEEDFLIKYFSSSGKASKILAKNTDIKGTKQKFKIINSVYD
LETKSIKHDIKLVIKRENSKYTVVSLTVDKSSYQKYKDYFDGLF
>TDE0556 hypothetical protein
MARYELGAIYEIDAGKKSYYARLLNCDLYGVFAPLSGEISEEAFENTPYR
LYISTGSYAVKRGFWKKLFPSPDKTDIERWSRPLHLVVFTPWDIEGALNR
RTSFDKYGHTEILDEKTYIQFLKQGFISIIQPMYEKVPQFLNNYYDDWPA
SEIYSDVLTGAGTAEHQQKQMSSLKKIGFDVSKY
>TDE0193 conserved hypothetical protein
MPDHHFFDLIQLYLGKIKTPFNKQRLAEQLSAFLRKPAIQEKIAESLDSY
DILILKAVSEIPNPTQAMLSIFFSKKISYSELSEKLLNAEERLLLYRVQN
NDGDKIYRINPILQKIIDPFLSPNLFFMPEKTGQVKSKEININDTALAGI
YSFCIHNEVVLKNDGSFKKKYEDLIKEVFPWLSEKTKHIDSIFLACESLG
LVFRTENGFAVQKAKWGAFSQLNKLERLVYFTAASLFKMRKENLQKLVII
LFEFLNSFYPDAYYEEEDVEQFFLLLYMQNFSSAVQNEIGNENILHTNFI
DTAELFGILCREKNLIYLNPELFKNAEEPQKPLLIDPSFEVTVLPDSNLK
HLLSAAECMEPVLIQTTGKFEITKKACSRIFQSELTSENIYKILSDATGH
EIPQNIRVSINEWYKNFTSLELYSGFVVSVNKEKEKFFELDTPLKKLVRK
KIAEGVYLLNVQDLKDFEQAVYKSGLEFIFYKNKPPQSSSVRNFQKLNLF
SQKEKKDYTKKLDWVKKQKERENKYSKTLSQLSAILKDLHLTKEDAKAVS
SRINRKAIITEEQLKDGVFKFTKKEATGLDFLGKQKIAEQAILGNHSLEI
ELHTEKGKEKIYGIPEDILKQEKDAVLILACGNLNDKLKISIAHISKIKL
IQNSIFSE
>TDE2265 hypothetical protein
MGLKGKGKTTALNGGLSLPLLEVIINAEAFKDTENKELKEFLEYLKTGKT
KSEFTRRIEEMIQTVKQNEQARQEYRLMSTFEMDARYKGFSEGTYNNKCE
TAKLMKRKNFDIALIKEITGLPESEIEEL
>TDE0706 adenine-specific DNA modification methyltransferase
MKEQREENKDFLTTQIITYLGNKRSLIDKIEEEVKLISKYLNKEKLICAD
IFSGSGIVARMLKKYASKIIVNDLENYSYVINSCYLTNKEEYPKKLCNEL
RDEIISSSLNKKIPGIISENYAPKDDNKIEKGERVFYTRKNALLIDTYRN
LIDKIVREENLKKFFFAPLITEASIHVNTSGVFKGFYKDKNTGVGCFGAS
GKNALTRILGKVELKEPVFSNFNSELEIFTKDAVILSKEIKNVDIAYIDP
PYNQHPYGSNYFMLNLILKNRLDVPISPVSGITQGWNRSVFNKPYLALKS
MEEIISSLDACYAVISYNSEGFISFEEMTNMLQKYGELKTVEIKYNTFRG
SRNLNKRNIHVSEYLFVLKK
>TDE0302 conserved hypothetical protein
MSTAVLQTRVDSQIKKEADDLFNALGIDTTTAIRLFLKQAINQQKIPFEI
LPPQKEFSPSVLAAIKEARQISCDASVKQYKTAKELLADCEV
>TDE1786 hypothetical protein
MEYAIKILKENKALLENNKAKNSQEILELKKAIDSLTIIENSKIDYLSLS
NNFASHTCTLWTAYDEGKEFFIPQIDKIHNDLLKDMEKKYNELEDNIKKQ
SDSEILVKFLDDQSNEEYELENMMRSLKSVYDEIKKLTNEYYGTDLYKGY
WYLYSEIYFDFKCKYFQAGINRRQSADLDIFTLAKDLIHHYFVFTSPIIP
SAIILIRQSIEVKILQTFGIKEFKNEKGEIATIPISRLLAFSKEKCNKNL
LEFPIDIDLLIAINRWCNSYIHTGFFLSQNWLVERIISVLCTLFLEPAYG
KTCFDLEGSIKIKEEYLDNGFYSDLQEFLSKKGNKIYIEKTAHRFVK
>TDE2109 ATP-dependent RNA helicase, DEAD/DEAH box family
MLITFKELGLDDIVLQAVEAKGFEEPTPIQVLAIPRLLSGEANVIAKART
GTGKTAAFGLPLVQELRSNTGKVRALILVPTRELAVQVAGELESFRIEEY
PRIATVYGGAAIGPQLRSLKTGVEIVVGTPGRIMDHLERGSLKIEDIEYF
ILDEADEMLNMGFIEDIENIFSKANPEARVLMFSATMPKQILSIASDFMG
DYEIVEEEPQEERASLTEQFFWVVREGDKTEALVRLIDTSPNFYGLVFCQ
TKIDADDVAKELDERHYEAAALHGDIPQSQREKILERFRSKKTRILVATD
VAARGIDIEGISHVVNYAIPYDGPTYTHRIGRTGRAGAAGVAVSFVRPNE
VKRIEYLRKHARGELKEGKIPSIEQVIEIKRTRILKETAAQIEKRISEEK
PEQGFAAFANKLTEYGDAQTVLSFILQMQYGSFLSPAHYKTIKPVRSEGK
ARKSDDDSLRLYIGVGRKDGITKRKLAEMLSRLLSIPERLVDDIEVMDKF
SLATMPKNAANDALRLCKKKRGLPHMHIDVKSEAPTNYGSIGKGKRGQKR
KNGTQRKKEGLSSASKYKRK
>TDE2303 conserved hypothetical protein
MDSLGSKGESRIAEWLTDKDYLILEKNWRTRTGEIDIIALDKTEQTSSGG
ILVFIEVKTLLKTELSDLDLIINKKKQERIIKTAKHFLANNRKYNKMYIR
FDVIVLRSNPFLEQPLEILHLKDAFGDCYD
>TDE2267 HRDC domain protein
MQFKLFVIPISNYLKTIDEMNIFLRSHKIITHTKEFVNSGENSFYSILVE
YLDSPISAADKEKSSIDYKDILKPEEFAFFPYLRDERKKLAEQAGIPIYA
VLNNAQLSQIAVEKPKSISELSKIEGIGQGKCEKFGEAFLQAVHNYEKKR
QSISQDNRME
>TDE1709 DNA-binding protein, HU family
MKQKRSKIDIIDSVYRNNPQYQLKQINAIANLFLDELSVLLQQGIPVEIR
GLGSFDFAVLHGRKNARNPKTGEAVLTADRCKVRFKPGKELKEALHKIDT
QELIES
>TDE1825 hypothetical protein
MSTCYLCKNEITEQNITIEHIILNSMGGRLKSSNLICKECNSKFGDSFDA
KLSKQFEFFANILDIKRERGKVQDVIMVRESTGEEYRVTPDGKPIVNKPT
IERKEIENGEEIHIQARNLDELKKILVGLKKKYPAINIDECLKKAKHIKE
RLSEPLGITLTLGGRDSMPAILKMAINFFVEITRDVVTVSEAIEDLRKNS
TDKVEPIILEESLFDLGENEVTHSIFLNASPEEKKVYAIIELYGTIQFIV
KLSKNYNGNAFIKLYVYDVLLTKEIQKKVNYIPDFNYIFSHEYPKSNPNF
QILNDKMSHVMQIAMKRKNNSFISEIIKKSFDNTWGKLPEGKIITNEDVD
MCLDELMKNIELYF
>TDE0086 conserved hypothetical protein
MNLIEQTIKTYGRDLQNVFVFPSRIASRLWFQKSLNITGLGTVPSENYMS
WDGFKESCLVSKASSLSPVSNTVRRIFAQYISRINSEKAKDGEPLFKFLI
PQDYAETGAVFSEWIAGILPQLDHFEKRYADKGSDFLEDDEMKDYLVLKN
EYTDFLKKNSLFEPSWVSSEFYSYQKKYIIIYPELMEDFGEHAELLRQQK
EISYIPCPRFNQKKNLIDVYKNSRSELKNTVLQIEKLLSEGVRADEIAVS
VPDIENYAAYIKREFYLRGIPAEFRSGFKLGLEQAGKLFSLIYDCVQNNF
AFEFMKPIVLNKHIPWKDREGAEALIDYGIKNNCAVSWKENKEDTVYKNI
WIESFKINYERDEIEVEQKKKARDWFYSFYYVVNRICESKTFADLQKNYF
LFRNELIDENLFSEKDNAILGRCISCLQELLYLEDKFEAYMPCDRFKFFI
SELDKAIYVPQNTGLAVSIFPYRVAAATPFSYHFVLNCSQDHTNIIYNKL
SFLRKDKREALGVFETDASPYFFEAYTESPNTVFSFSPHNFNSYLIINNL
FEISEDEEIKNAERVNKKTEELKSYDSFLFDYPEKKEDYSEKTSAIYKIQ
KNAASTFSTLKRKKDFSYLQNSYDRISEELNSYMEKNLFKEGSLKLSQTD
LKIFTECPVLWFLEKVLSVFSENYDADIFDARNIGNLSHNVLEVLYKEIG
STDKYFNSKNLDNYIERASLIFDDLAEKSMDFRGALAKPFIQSLKKRVME
AVSFVLESDASLLDGYEPKWVEEWIEMENDGILYRGKIDRASFPQDGRSG
VIIDYKTNNMPAYSSYGKKNSTAEEIELTDFQIPMYIFLAESRLKKDSTK
EKKNFETIEHAWFLSFVQQKINKVVNDNEAIPVTRSGSERSREDFQSSID
AFINEAERFVELVKNQDFTKPSSVSFETCSTCGFKHICRTAYSVK
>TDE1173 site-specific recombinase, phage integrase family
MSVKLWINRNKIYLSIYISGKRWRESTGLTVTTDKAQNKVVMDMAEVLRS
KREVSLIAVSNGLSDPALTKITVLEYVKNAAAEKNKKHPLHKVVLWIEKI
SPTLKMDALTPTWFENFQQTLQRETELSPYTCENYACSLRTLFKKAVRDG
VLVKDPTIGVKHIHCPESIKEFLMPEDIRKLAAEPIGGILGADVKKAFLF
ACCTGLRISDLKSLKWGGVSFEKKTLTKIQQKTKRAVYLPIKDEAIAFLH
LLAEENPNRTDEDFIFPHVATTGTNMNQYLIEWGKRAGVRQKIGWHLARH
THATLLLESGADLYTVQKLLGHTKISTTAQYTQVTDRKKKEAIDLLPDYG
IVGD
>TDE1280 conserved hypothetical protein
MKTKQTLIQTKLFPFEDKKYKNFNKKLIPNIDENTMIGIRTPVLRKFAKE
FFKTEPEQVSDFMKDVPHKYFEENNLHCFFIENIKDFNEALKETEKFLPY
IDNWATCDSFSPKIFKKNHEEIYKKILVWLKSKHTYTVRYAIGLLLSNYL
DEHFRPEMLEIVSKIRSDEYYINMMIAWYFSFALIKQYKTALPYIKNKKL
DTFTHNKAIQKAIESYRIPKEVKELLRGMKVKG
>TDE0427 hypothetical protein
MVKKFFYIFICCILSSLYAIEYEEFIAGVLTNSNEYQKALSKYNIKKTTA
QKIQYRWIPKLSLKLNYISNVEIKTHDQIHAFTTGLNLKQTLPMGMGLTF
NIDNTFALSKIKGIKNEYSSSAKTQFSMPLYFFAPAILKPYSEHEFYLGE
NSISFADLELQRIKEKIIAEAIYVAVSYWLQKKTIAIEEEKSQIDLQLGL
NDEALWKQGKLSTLELSERNTKRYNNQLNLLNSKKRYLQMLHTLNLTGMS
ADAMPSNIESWIKKLESYISHEYINTDAEFLLKQKQLKVNQYYTLKEQLN
RLPSFIFSFTLDPASKSKGGVKFKDTIQNYWKAEKDWLFNFAIGINIPLS
PLDEVYDIDKTTKELLNLNKLEIEALSMNYQNKKEVHEINLNILNEVCIL
AEKNKENIQNRLASSEVLLKQGYITEIDFKIQNLDYQLSQLNSLKARLDY
IIEVLNY
>TDE2176 site-specific recombinase, putative
MIEYTNKITALYSRLSVGDEDRDGGESNSIVNQKAFLERYARDKKLINIR
HYIDDDESGRFFDRSAYTQMISDVEQGKIGIVIMKDMTRWGRDYLQVGNA
MEIFRRNNVRFIAINNGIDSIDQNTLEFAPFINIMSEWYARDISKKVKTG
IKTKGANGKPVATEAPYGYIKDPENKDYWIVDKEAAEVVKLIFRLFMEGK
NRNQIAVYLKEKEILTPTFYMKRQDRGTAKSKPLNEENRYNWNKATITRI
LKRQEYCGDVVNFKTEKHYRDKRNHYVDKSKWQITENVHEPIIDRTTFEN
VERMLKNAPVKRPNGDGEIHALSGLMYCKDCGTKMHIRTIHKNGKVQHVT
YCSEYAKGKAKHPKCNSPHRIDVDEVMENIAEVLRKIAQYSLENKAEFEK
LVKESLYKEQTEEVKKNQKRMPQITDRMEQIERVMNKLYEDNALGNMDTE
RYEQLSRKYAEEYYTLKAEKEEIKERLSECENANQRAKKFIRLAESYSNF
EELTPTIINEFISKIVVHERDVKRARYVVQRIEVYFNYIGKFENELTKQI
EPTEQEMLQMREEIEEAKKEKARAYRRAYYKEYRANNLEKCREYEKLKAR
EYRAKKKLQATT
>TDE0363 conserved hypothetical protein
MEKLYTMNQIAEMLELSVRTIQNYLKEGKLTGKKIGSQWRFTEKDLERLF
SDESFIDEKNIDENHRLQEFLKKDSVNKPEIFSILNYPYKKDFKLKELMK
KINENIEKANKCRFYFASTANTFKFFLEGDIESVINLQKIIDENFKF
>TDE2679 conserved hypothetical protein
MKKKAFIFLCLSLVLNLFLSCGGKKAAYETGKSTRAESYMAESKSSSSDS
AFKEDKKESDAVNTASLDNDNIERKLIKTGFIEFETEDIKKTRETIENLV
TKYQAYISQEDEQHFQSNIRQTISIRIPKENFDNLLNELTIGIKKLDNKN
ITVEDVTEEFVDGLARLKVKKETEQTYLKILSQAKTVKDILEVQNQIQDL
RSDIEAIEGRLRYLQKSVNYSTLNISMYQIINSSIARPSFFTKALNAVKE
GIGLFSDIIIGILYLWIFILIIIAVAVIIIKKRRNKIKEKSLDN
>TDE2335 ATP-dependent DNA helicase, UvrD/Rep family
MAQPDYLNILNEEQLSAVKHQGSPLLILAGAGSGKTRVITTKIAYLIAEH
NIEPERILAVTFTNKAAKEMSERASNLDKRAERAMIRTFHSFGAWILRMY
AEWAGLSHNFTIYDDDDALSLLTQASPALTKNAARGIIKKISRAKDYCLL
PDDPLLQEVDPNPEFAKIYADYQKRLKETGNVDFGDLIMIPVMLLKENPQ
IRASIQNRFSVIMVDEYQDSNIAQFEFLKVLTGENTYICVVGDDDQSIYR
FRGAEVQNILTFADTFKNTKIIKLEKNYRSYSEILAVADSVVKKNTGRLG
KTLVAERGKGQKPHIYFLPNQETEAELCARLISQEVENGGAYSDWAVLYR
TNAQSLNFETDFLHKKIPYQVIGTLKFYEREEIKDALAVLALISNGRDEV
ALRRIINKPARGVGEITQKKLIDLSRELMFSQKSDELMLESKDDYISAMS
VLMNSVSLTKKAKDGLKNFLNTIKELRSIIEAGDIFFKKEEPKGEGLAPF
IYEVLKQSGFAEYYESVDSASGTQKTANLNELANTASLYDFSVKGLSEFL
EHIELDRSLAESEEKKDSVNLITIHNTKGLEFKNVIITGLETGVFPRDNG
NFDELEEERRLMYVACTRAKDALYMTSCSSRRLYGSLTFTQPSRFIFEID
KDLVNISEASSPYSTFSGSFGKQIPADFSTKKEEHPLLSKWKKGEKIYHD
DYGYGAIIKADISSGELVVNIQFETGLVKRFMPEYQANDMTIIKD
>TDE2245 topoisomerase IV, B subunit, putative
MATKKAVYDESKIKTLSSLEHIRLRTGMYIGRLGDGSNPDDGIYILVKEV
IDNSIDEFIMGNGSRIDIQQEENKITVRDFGRGIPLGKLVECVSVINTGA
KYNDDVFQFSVGLNGVGTKAVNALSEHFRVVAVRDGKYAEAIFERGKLVS
EKSGNTKPGIKNGTLVEFIPDTKIFGDYKFNLDFIEKRIWNYAYLNSGLT
LSFNGKLFKSENGLLDLLESNVGTSTIYEVCRFKEKQLEFAFSHTNNYGE
TYYSFVNGQYTSDGGTHLSAFKEGLLKGINEYFRKNYKSEDVREGTCAAV
SVKIQAPVFESQTKNKLGNTEVRSWIVNDTKSAVVEWLQKNADSAAKLES
KIIANEKLRTELNTVKKEAKAAAKKIAIKIPKLKDCKFHLGDGKFGEDTM
IFITEGDSATGAMVSSRDVLTQAIFSLRGKPENMYGKKRAQIYKNAELYN
MMMALGIENDIEGLRYSKIVIATDADNDGFHIRNLLLTFFLSYFEELVTS
GRVHILETPLFRVRTKKETSYCYSEKERDEAVSRLGASSEITRFKGLGEI
SPKEFGQFIGQDIKLLPVTVQTLKKVPSILEFYMGKNTPERRKFIMKNLL
AEIDA
>TDE2486 hypothetical protein
MPDKISHILISKKYLEKINDIKGKEYFYYGAIYPDLYDLSKKEEYYKSHF
IQKGSGYNSKLLKNFIKKHSYAPPSFLKGVDFHIFTDHFVSKNLNKYYSF
YTEIKNKTDIELSKILSDYALYHCRNEKIIPVILKEENDEQIQSSFYEFE
KYRKTDIGDISSVNNNYLEFIDEIIDKYLKQNLN
>TDE0729 conserved hypothetical protein
MANPVWLFMGPEIGERNTAVDTVLKTLSKQYGDIETHTVYAGDAGMGDVI
SLLQNASLFSSAKLIILKSAELIKKKEDIDLLTDWIQSVSKKENTSDSFL
ILISDETSIAKKISDTVPKTQQKIFWELFENKKQEWVRSFLFREGIEIED
EAVDELLELVENNTDALKMACSHLVLYFQKGSHIDQENIEKLFAHNKEET
PFSLFNALTMGSLETALSISQKIILSKNSSPVQIIAGLSYCFRRLQDWHK
IHRDNEYLDDFALKRFGFLGKTALAQYKRAAKLWNEVQCVKIIALLSETD
LELRSLGTSLQNIVMDMCLYEIACKSGNKIEKYTADNI
>TDE2033 ISTde1, transposase
MEEKLNMGKKERTRGKILAMVVERQITLKQAAIKMQVCYRQAKRIYKRYL
EQGDKGLLHKSLGKPSSKRVDENIKKKCLELYAEKYHDFGPTLAAEKLEE
LDGIKINHETLRRLLIKAGLWSRKRRRNIHRSRRERRECFGQMLQFDGSH
HKWFEQRGPKCCLMNIVDDATGMTQSFLTEQETTEAAMRLLWGWIDCHGI
PQAVCCDKKNAYVITREPTMSEIIKNVRPKTPFQKACEKLGIQIIVAHSA
QSKGRVERNHSVYQDRFVKELRLAKINTIEKANAFLQKEYLPKINKKFAI
APLDSQDGHAPCPSKEQLANIFCYEEQRVVSNDFVIRYENRLFQITKSNR
NIPRPKTNILLRELLDGTIKLIWNNKELDFLEITKEYLKEVKLS
>TDE2592 DbpA RNA binding domain protein
MSNKIRIEDEEQLISSLKDLIEAIKTQESPEELNLYRRIFKKAVPLTMRS
YVAAYLIKQAGIGGSRIYKKDNRNGLGKGTFKQNSARPSRPKVILAEEES
TSLFIGVGRKRGIFPKDIITLLIQGAGISREHIGDIRILDNYCFVQVMQN
EAETIIEKLNNSYYRGKNLTVSHSRRPEDDNFEDSETFEHIENYAEEENN
HSQTENEV
>TDE2734 hypothetical protein
MLKYCLRENLLTPAPDDYMAQAQDVRSYTLDEIIDLMMEKGTTLTRADVA
ATLQVYGEVVSAIIKDGSAVNTPLMNTSMSISGVFDGANDSFDKKRHTIN
LNLTAGTLLRDAVTKIKCEKTESAGTDPYITEVTDVVSGKVNEVLSKGGV
VQLVGSRLKFDAKDAAQGIFFVPETGEAVRATVIAENKPARLMAIIPAGL
KAGTYYIEVRTKIDMGGKKLKTLKTGRFAKPLTVTA
>TDE2530 radical SAM domain protein
MNIYRGCSHGCIYCDSRSECYQMVHSFEDIEVKENAVELLEEALIKKRKK
CMIGMGSMTDPYLPIEKELGLTRKIIETIYRYGFGFTLITKSSLILRDLD
LLKAVNKKTKCVVQMTLTTYDDALCKILEPNVAVTSERFKVLKKLNEEGI
PTVVWLTPILPFINDTPENIEGLLRYCIEAKVFGIISFGMGLTLRKGNRE
FFYKKLDQHFPGLKQKYIRLYGESYSVMSPHNASLMNMFFKLCKENGIEH
NPDKIFAYLNSFEDKQQSQLEFFCQ
>TDE2751 conserved hypothetical protein
MFSMAPEARGEAKRDPSEPDLTLTHFEKVEKFFSDTPHTLFDTAEFYKAV
LKGEGENAQRLHTSLTKFLTTTDPKDRTVFRQQVESAYWNLVSDMVMKIA
SGKSSKEKQYAVRYGLVLPTLLTTEQKDMFAKVIDENKYCEAVYYLDEWF
REIGIGKINPSATDEVKISKRDDNSRFNQLLEKAKGKLQTADNLLRAKSE
EISRYEDSIKQQIDSMFSHDMLANFSNVKSPYSESQKQQIMQINERLKKL
LNFDKELQNCISDYKEADADVRSLREKADASGGITTNMSGAEGEFDTVKQ
MAKMTCGRKGNHFPILSREYFRSSSKELGTRENILREMKWLEDIDVQAYC
RQYKNQLNRIPPFVILVPTYGDIGFCWEPFDRYNRVTSRGRIVIPMYPKS
LKVSLLMATADLRWQVAKEKASYYWMEEGLTGNYYQWFQNQKLKGDIKEY
FIQDYITWMIKESEGIQKLDKEVREVFWRYMPFSDSVKAKLKDRALVYQE
LCQRDLNRQMSDGY
>TDE2505 hypothetical protein
MDTMEKFYSDASRLVEKSHANQLAEKLNKDGDTAAFDARLTEIFCKAVSL
YDKQAQVLANDFADYWLSAYSEGRQKKEDAVEWFYQIFSLIAGNFEKDMD
FPQEDWEQINLIISSEAESLDMDLLNSIMTVIVERKKI
>TDE2742 site-specific recombinase, phage integrase family
MENGTSFEEYLKKSNLSQNTLTSYLWTVKYYTEHYDSVSKENLLAYKGYL
IEFFKPKTVNLRIQGINKYLQFIHKDQLQLKFVKVQQKNFLENVISNADY
QFLKSSLKRDENREWYFVVWFLAATGARVSELIQIKVEHVKLGYFDLYSK
GGKLRRLYIPKILKEEALQWLESIGRDSGYLFLNRFEKHITTRGIAQQLK
NYARKYGINEKVVYPHSFRHRYAKNFLEKFNDISLLADLMGHESIETTRI
YLRRTASEQRELVDSIVTW
>TDE2029 hydrolase, TatD family
MERKFRFAMDIGTQPADLKERQKFISDIFEGKIQGQETVHLPERFPDFMH
FAAGLWPHAESIAEPEKALAALKTDIDTLFLQKAEAEKTNPGKPFYCGLG
ECGLDRYWNGPAAEKRGAGSQADDEKGTSDIEGEEFLFKEQLKIAKEKNL
SVIVHSRDAYEDTLKCIDEVGYHKGIIHCYSYGLKEAYSFLERGWYISFP
GNITYAKKQADRDRIAELVRAIHADKLLLETDAPYLAPVPFRGKINTPLL
IEYTYAAVSEILDKSMEALAEQIYQNCCSCFLVK
>TDE1607 MutT/nudix family protein
MNNILEIELQDTEWEFTYIDHDREIVRAIVIDDYENYYFVKVHRDDDFGK
VTLIETAGGGVEPNEDLEDAIRRELKEELGVEVDILSKIGIVSDYYNLIH
RHNLNNYYLCRVKSFGDKNMTQTEVEDFHLSTLKLSYKEAIDKYNKYSNS
RLGKLIANRELPILMKAKELISDF
>TDE1620 hypothetical protein
MQITITNEDIEYAEKILLPANKHFDEERRNFITNLDTIDLQAVPGSGKTT
ALLAKLIILEKKMPFPDGSGVLILSHTNTAVEEIQSKLQTIAPKLFNFPN
FVGTIQSFTDTFLALPYYAHVHKTHPYRIDDDIYFRRCELALKYKYSSLT
WFSYRPHKVQMTTLLTAKIDQNGCAKCINGLKNLKCSTAIKIAQFKYDNV
KKGFLTYNDAFEFANFYINDNPRIVSIFQKRFKYVFVDEMQDMHSHQIKL
LDALFYTSGHTDEQQTITVFQRIGDVNQSIFGENDSDNSDGSTEKADNSG
KADWKPREHLTLLGSHRLSPCTAAIVSSFAVEPNAIQGLRKNADGTAIDI
KPYLFVYKKENIKTVIKKFAHLIYKLQNEGKLPMTGSYAAVGWRKSILDD
AADNKLGISDYYDSLCAAAASTKINYSSLTDHLLAVDPHKKHLETMRKSI
LNALLHILYMQKIQDKHGRYYTIRTLFKYLKEETDIYELFKRNLFRWCKQ
RINSEPVEQTIHNIQAFLPDFLQAVSLDNNLININNDTYLFITNPTTIIQ
NNKPTGQEQINTYSISGIDISIKTVHAIKGQTVTGLLYMETYNSSMHESN
RLVDCFIHKKFRKTAKTKKSGMMYKAAKTVYVGFSRPTHLLCFAVQKERF
DKYLSNIDRAVWDIIDI
>TDE1022 ISTde2, transposase
MNQKNDTIKSKKWKHLSEKERYAIEALFKSDYNARQIAQSLNRDRRTIQR
EIKRGMVIKVTENPYVSRNPKVPDYLEKTVYSARKGQQRADKMKLLKGRG
LKIGKDKKLLHYLETCIADNKFSPDAAIGQIKELGLQFPVMICTKTVYNM
IDRGDFSRLTNKDLPVKRNKTKRKYKKISKIAKNNIKGRSIEQRSEQINK
RQEKGHWEMDLVIGKGRCCLQVMTERVTRKELIFKIPDKKQESIKKNIDM
LEMKYKDEFKEIFKSITMDNGTEFLDQEGLETSCLKEGEKRTTCYYAHPY
SSWERGSNENANKLIRRFIPKGADISKYSDIQIKQVENWINNYPRRMFGY
KTANQMYT
>TDE0085 ATP-dependent DNA helicase, UvrD/Rep family
MNDYIKNIMDSLNENQKNAVSVEKNSVIAAGAGSGKTKVLAARYVYFVVE
KGVSVEKIIALTFTEKAAAEMHKRIYNELKKIDHPNAKNAIEKFHLAKIS
TIDSFCNRIARDACRNLGISPDFNIDNTESEKLAYRIGLDFFLKMRSDKT
MQFFLGDNGIDDFVSGLFVKLLSNYVLISRPIDFKKSLEDQIKYHDDEER
KTLAECFDVFEFIKENDPSKNFTEEAISEFSTLPHFPESIKDEAFIKLLP
IVDKISKTAKGRGNDAVKEIKEKLKIIYEKLICIYNFDYSRDFLASFFDM
LNELQKEYIYEKKQRGLLTFSDVSQLAVDVLINDIDLRNFYKKNADIIMI
DEFQDNNSLQRDLLFLIAEKFERSEKFVPGPHELCPNKLFFVGDEKQSIY
AFRGADVSVFRKLADDISDKERLAATRLLINYRTEPTLINLFNTIFSKVF
YSEVNKPLEKNGFVPAYEAEYVPTETRAPVKGIEPKIEIMFFDKKRFNAL
EDSSRFLSPVEAEAFYLAKRILELRNQGFKIRDGKSARACSWSDFAVLLR
ASTKQSTYERVFRNFGIPYRSVQQRGLFNDAPINDIYAMLKIIAYPSDKK
TYAQVLHSPFVNIDDDAFAVLLLNFTKAFDISLAEKLNEKNKDAYLRACD
LFARLNKNILTMSCAESVTYLWYEEAYRYFLLSNEENHHYMDLYDYLFEL
ACQADINGLTFSQFVDLLSSHIEDNERLDDMELPLDDQKDSVQFLTVHKS
KGLEFPIVIVPDCGNRGIPEKKEGLVFYNEDMGPVLYSPKAPGLPAKAGN
LIFESLRDEANAKLVAETKRLLYVAATRAESYLIISGVYNHLQNEDSKDS
KKDVTKDNDCSSSDSRSLEEIKSMLKLSDKTISFFELLLPALPDKHEDII
FTEILPTERKKLFNNLKTQKHEKVNFEKLFASSKVKEFNLAEKRITTATS
LAHEVNKKSREGYLYSLTSEKDKLPDSFEDKDGQKEFTAAELGTLTHSLI
EARLLNKEFIYPKGHSEVERKKIYAWADNFFNSDMYVLAKEAEQLKSEYG
FLTDYEGQIVSGQIDLLFKKSGIVYVVDYKTDEIENPDSHLTQLKIYKKA
ASDLAKTESENLKENTDKPIEVKTFIFYLKTGHCVELKT
>TDE0016 ATPase, AAA family
MSKDLFEAAASSSKQNEPLASRMRPISLDEYIGQEHIIGKGCLLRRAIQA
DRLSSLIFFGPPGTGKTTLARVIANTTKSNFLSLNAVLAGVQQIREAVTN
AEENKKLYNRKTILFVDEVHRWNKSQQDALLPWVENGTIILIGATTENPY
FEVNKALVSRSRVFELKPLTDNDLKKVAQFALTNKERGYGNWKIEFEAGA
LEHLIDTASGDARSLLNALELAVETSAEHWPPEENFKITISLKAAEESIQ
KKVVLYDRDGDYHYDVISAFIKSIRGSDPDAAVYWLARMIAAGEDPRFIF
RRMLISACEDIGLASPGAVSVVAGAAEAFDRVGMPEGRYHLAHAALYLAT
CPKSNSAEAFFKALDCVQKENKEVPNHLKDSNRDGEALGHGEGYLYPHAF
EGHWVKQQYLPDGLEGTHFYEPSNQGYEGKIKPEILKKRQS
>TDE0039 ISTde1, transposase
MEEKLNMGKKERTRGKILAMVVERQITLKQAAIKMQVCYRQAKRIYKRYL
EQGDKGLLHKSLGKPSSKRVDENIKKKCLELYAEKYHDFGPTLAAEKLEE
LDGIKINHETLRRLLIKAGLWSRKRRRNIHRSRRERRECFGQMLQFDGSH
HKWFEQRGPKCCLMNIVDDATGMTQSFLTEQETTEAAMRLLWGWIDCHGI
PQAVCCDKKNAYVITREPTMSEIIKNVRPKTPFQKACEKLGIQIIVAHSA
QSKGRVERNHSVYQDRFVKELRLAKINTIEKANAFLQKEYLPKINKKFAI
APLDSQDGHAPCPSKEQLANIFCYEEQRVVSNDFVIRYENRLFQITKSNR
NIPRPKTNILLRELLDGTIKLIWNNKELDFLEITKEYLKEVKLS
>TDE2660 conserved hypothetical protein
MDKVQKGHSPKFFCENCGQEVKRNTKVCPHCGRFFASVRCPSCNYMGHTD
EFINGCPSCGFAVSSDSNKNTKKYHRNKLKEYRAKYKSNRYDDPLPWWIY
SLVIGSLALLIIYIFYFKT
>TDE2015 lipoprotein, putative
MKILRNMIFIFMLVLLVSCTKRESKMIVNDVQQNTITESSKNIDKTPKEE
KIEFDTSGSGKKSCFPYGANIVNNTNYPSDINFGDISLFPTDARYLNENF
RYKKIISWRRWDEPAIKRKLKSYAETSEGENFIGHKYSSADIGLMQLESA
ILFDEDQKKIIEVEDSPYYDGKIVKLNEYNDLGLQTNIYDFRLDNEIILF
SEEFYNELKNIDDKLMYSYEYIDIKDNPNILKYNHYFYHSKGKKLLESGR
ISKTLNMKNTMDNNFFIARANKSLKYYLKETHSYALFYYDEMGRLSKIEH
LPTSMGWKFYDVEYDGNKLLEGKLKFDEKSDAYFKYVYTKHDKNDNWIEA
KIFYDDDTEASYTAIREIEYYEN
>TDE2581 hypothetical protein
MKILNNRYRIIKELPIELKTNTGFVVHDLGSDNREQLELRLIYASDLDED
FMQFIREKFLLIKQLKESVHIKNYDFTRLISIHNKIIDEDIYLYTIEHIE
KKIPILDFLPDATTKDIFELFAAILKELNYLLTYGIVYNNFDLTNIYVIK
NNGRIFIKAKDLVTEKNQYSDQIGLLSNEEIYTFNYNHDILKTIILSLFL
KKNIIKNHEKYFQELQQIETNRLNDENEKHLYKCFFKIYNKINTRKLKKN
PTPFMK
>TDE1209 site-specific recombinase, phage integrase family
MNEVFESYLTYSAGVRQFTKATIDSYKNDLIIFEEWLKELDLNIFELKAS
DIRIFIAELADKKIAPASINRMMSTLRGFYKYALRFNLTKMNPISSVRNL
KLAQKLPVFMFPKQAQEFCRLPSNAGILWETRDAALFASLYSTGCRVSEL
AGLDIKDLDKTLSYAIVFGKGKKERKVFFAEFAKEYLREYLKERSDLVEK
FKGQVQKDGKGKIRDTLFINQKAQPLTSRGIRYIIDRYVELSPELKHLSP
HAFRHSFASTLITRGADIRVVQELLGHESVSTTQRYTHITAEQLQNLYKT
AHPHS
>TDE0171 nuclease SbcCD, C subunit, putative
MKPEILKLTNIGPFRGTHTIDFSLMDSIFLVCGKTGAGKTTIFDAISYAF
YSKPLGSRSQITRSLRSQFAPEEETAEVELVFTMGPAKYRIFRRLPFLRP
GKKNETPEESALAQWDGKTWKDLSSTNKRDTDKKILNIINLNEKEFARIV
LLPQGEFAAFLRENSSQKKETLEELFPISRYTKIMENLKEREKAESYKIK
NTQDALEALGKEFDADSYPSKKEGFEKEIELIKKNYNKISKKIEEKISEK
EQAKVLKEKKEELVTIKTRLENLNAHKEEIGLMEEAVEKARRAASLAALA
DSVSKLKNNIAEYKTDIEKKIKDLNAVTQVLDSLKAQEKEIEAEKENNTA
LKQSLDRLKRAAEVYKEIEERSYEKKGLSLQKKENTEKLAQTEKNIQELK
DKVSEYLEIISELDNRKEMAETSTQKLSYLKRLFDIAVKKEKASKLYTTH
KAAAEKNYNDLQLILKDIEIEKELFEKLKKEKKDLEINAEASALAVHLKD
GEPCPVCGSIHHPSPAVENTESIFSLDEKIQKCERSIEKFNLDKDSLSNS
LTARNKDADWHKEQLAELDRSFFNLNEEFKNTSFIFEEMPSEKTIEDLLP
QAGKEAEKDSLLFKEAQTANTAKINLEQKLSSIQTQKEALTDALTNIKIK
ESELNTILHEKKKQYDDAFKSIPSDIQKENIDDTIEGCNEMIFASDRKIS
GYEEKLKENNDRHTSIKAGLIQRQEQLAKWEKSLLEEEENLKDSFERKGF
SSLKELLDSILPEEKISDFEETITKFKEEKITLEHSAAGLKKDIEGKTFI
QPEKIEDEIIILQKNLDEEQDRLAEIKSSLDKLKDLFERRQSLLKELKQR
AEEAQLITELSLSLNGSNKYKLKFNIWMLSAFLREIIVYANTRLERMSGG
RYVLKLSKELSGNNLSGLDMEIYDAYTGGIRPTASLSGGETFMVSISLAL
GLADSIQTRSGGIRLDSMFIDEGFGSLDEASLENAISILDEVRGNRMVGI
ISHVSELKTRIPQKIEIEKNSNGSTIKIRG
>TDE0966 hydrolase, TatD family
MYTDAHVHILDTIEELNSQNIENSILKTFDKDIFFCASANEAGRFEIQEK
ICRENSEHFILSFGIHPQCPIEDEIPYLEKLLTEKRIAAIGECGFDLFDE
HYRSTLEAQKKVWKTQLAFAQKSNLPIVVHCRKGMHLIFDDVKTLKKINA
VIFHGWAGSVTEARSFLKKGVNAYFCIGKGLLRGQKAQLETAATLEEDRI
LTETDAPYMSLKEEKFSLPTDIKKVFSVLAELRAQSEGLLNYDGKTYKNY
AEELKDSIFENLKKAYNIRFDGN
>TDE0506 DNA-damage-inducible protein J, putative
MATTNLNIRTDKEMKERAEAIFFELGLNMTTAINIFLRTTIRENGIPFAL
KLDIPNAITASAIEEGRKIAYDDTVKKYSNIDDLRKALEI
>TDE0229 ATPase family protein
MRIKVQKAASLFFPNTSLEFVYFEAIANSIDANASRVIINIELEKFSEEK
NLLISIEDNGEGFIDRNFEKFCSILDTEDKQHKGIGRLVYLNYFSNIKIE
SIFSNKKRVFIFNDFFDGANELSDTIQENKTILSFEGYKKDKIGKYDYII
PESIKESIIYHFLPKLYSMKIKNNIFHLSINLKTHDDNTERGFYTHSVEF
DLNDLPVLKEKTINDSTSLFSYFKLMYSIEHVYTDQSVISAICADNRTIP
MELITNKDFPFGYKMVFILYSDNFDGKTDNARGALELDNKTINYVRQVFL
KLVAEVIQEEIPSIVKQNKAVEIKLENDYPHLDGYINTETIGLVDKDSII
EEAQMKFFNEQKELLEASDLSDEQYKKSLEFSSRILMEYILYRTKIISKL
KKIDKNNNESEIHDLIVPRKKEYNKDNLIEDIYQNNAWVLDDKYMTYSKV
LSDKEIEDIYNTLSISSTHVYSHKDNGRPDITIIFSNDPKKFTAVDVVII
EFKKLGLKLAYKEEIISQLKQRARRLLEFYPNKIQRIWFYGIIDFDKEFK
ASLIESGFTKLFSNGELFYKSQDIVINPETEQIKIADIFLLSYDAMLDDA
ESRNETFLRILKQGIKRPVSESQSTL
>TDE2135 conserved hypothetical protein
MIKRFEDLTLQDDFMFCKVMQNPDLCKRLIEMILSDTIGKITYISIQHNI
KNYEQAKSVRFDVLVQTENGKFYDIEMQVSNEKNTPKRMRFYQAAIDISF
LDKGNSYNNLNDSFIIFICTFDAIGKNRPIYIFENICIEDKNISLQDRTK
KVIINSEAFENTEDKELKEFLEYLKTGKAKSEFTREIEAMIQTIKQNEQA
RQEYRLMSTFEMDIKDSVKRETAKLMKQKNFDIALIKEITGLPETEIEEL
>TDE1573 DNA-damage-inducible protein J, putative
MKTAVLQTRIDKNLKQDADAFFESIGMDTTTAIRIFLKQTLIQRKIPFEI
VQDNSFYSEKNIKALEHSKTQMETGQHSIRELVEV
>TDE0441 hypothetical protein
MNCFKTIIELQDILFPKFYTAMDSENNEYIFLKTQDSMINSLDKVSDKTQ
LEAYENHIHILRFHQLWENEEPYYDVKDFPNIEVFKIRA
>TDE2730 hydrolase, TatD family
MQIFDTHAHVGLIYSDPIEQLRVVQEARQGSVTRIVSICNSLHDFSKVYE
TLRFSPAVYHAVGVSPSEVTSPGKDWQKTIEESLKLPNVVAVGEIGLDYC
KKYGDKRSQIELFIAQLDIASKAGFPVIIHNREAGKDLLDILKERIPKEG
GVLHCYSEDDIYAKEALELPLYFSFAGNLTYRNARNLHDTVLALPLDRIV
VESESPFMPPSVYRGQRNMPANTIETVKFMAEMLSMDIEELADQLWKNSC
TLFRLPE
>TDE0730 hypothetical protein
MLKKQLLKKLLLLILTLILFSCASYKNKPEDEVPVWIEKVPAGNADYEYF
TASGTNKNFTLAEADAKNNLINEIIRYLGVSIKTETTTTALGSIENLEKI
LKSEISQSSAANIKKLKIKNRYTKKNKDSLTVYLLAEYDKNELRKERDRL
LKIAEEKILSVSEPQKKADEFVESKKYYSAALYYTKAASAALSSGIENGD
IKFRQNISNAKESLKKIKLNLQKDNLENTSNEFLIPINIGTFEERVPLLV
SYKTKVKNTTSIIIEGIETDQNGTANFILHDEKIEPKARIRIELDISEIK
QILGSKDFDEYQEAVKELQQIVFKQIINFEFKKPENKIKKEQKGTVSLFI
EQADSKNSIIEEKILDILKDMNFKTISAKNENPAADFFIYAKIETDEASK
AADGFLVRLNADIEIKNPNTQEIFYKKNISKRGAGFTEKEAHRSASIAIA
KAIVLAFSKIVNE
>TDE2586 DNA polymerase III, gamma and tau subunits, putative
MEYQVTATRRRPQRFEDLLGQEFVAATLQKSIEAGKIAHAYLFSGPRGCG
KTSSARILAKVLNCAEGPRPTPCGHCTSCEEITAGSCLDVIEIDGASNTS
VNDVRQIKDEILFPPNSNRYKIYIIDEVHMLSTSAFNALLKTIEEPPPYV
VFIFATTEIHKVPATIKSRCQQFNFKLVSIEILKQALADAAAELGISADD
EALYWIAREATGSVRDAYTLFDQVAAFSDGHITFEKIHEKLGLTGVDSIN
KLVSACVAKNGQEALSILDGILQGGISVEQVVSDCADYFRSLLLVKHGIT
KEALIGQRADRFPQDILQGWEAVQIERALSIMLQLFKDLRFSIDQRYELE
LAVSRLSWLGDYVSPADLKTAFDAAKSLISSRRTDVETGRPLPHREESRP
KESPRPFDNAGSLTEQFKAVLRRDNKLDVFTEKKNEEKQPVSNNVPSDNV
SFEKKDEAQETVLQTVRSVENAFNNVEELKEPLIEALLEKSGILSSAVGQ
SKDWILKEDSLTLFARSSFDYTLIQKQKDTVIDSISEITGKKIKLILKEY
IPPQPENKVEETVKEPEKIRTITDVFMGKIVECKNLISESEEGEENEVQN
VQNPAAIQEQNS
>TDE0140 ISTde2, transposase
MNQKNDTIKSKKWKHLSEKERYAIEALFKSDYNARQIAQSLNRDRRTIQR
EIKRGMVIKVTENPYVSRNPKVPDYLEKTVYSARKGQQRADKMKLLKGRG
LKIGKDKKLLHYLETCIADNKFSPDAAIGQIKELGLQFPVMICTKTVYNM
IDRGDFSRLTNKDLPVKRNKTKRKYKKISKIAKNNIKGRSIEQRSEQINK
RQEKGHWEMDLVIGKGRCCLQVMTERVTRKELIFKIPDKKQESIKKNIDM
LEMKYKDEFKEIFKSITMDNGTEFLDQEGLETSCLKEGEKRTTCYYAHPY
SSWERGSNENANKLIRRFIPKGADISKYSDIQIKQVENWINNYPRRMFGY
KTANQMYT
>TDE0199 hypothetical protein
MPIGVATTNKIPTYSLYHSFSIESIEKKVYDVFMTDLQPLSWMILVFIGL
FLIVFAYVLFSASAKHASGKKIRQTGKKGSPGVCPVCGTVLARDEQVKSA
VYPGADDRLCYIYGCPHCYPGCEKGVQRQCPVCHKTVPNEAHLIARYFDR
KKGKKRVHILGCSNCRFMS
>TDE2118 topoisomerase IV, A subunit, putative
MDYIESLFNKNFLEYASYVIRDRAIPDLEDGLKPVQRRILHSLFEMDDGK
FHKVANVIGHCMKYHPHGDASIGNALVVLASKELFIDTQGNFGNIFTGDE
ASAPRYIECRVNEFAKTIFYNPHITDYTVSYDGRNKEPLAFRAKLPVILA
IGAEGIAVGMSTKILPHNILEIIEAEKAFLSGKSFALFPDFPTGGLIDVS
EYEDGLGKVLVRAKLDTSDEKRIVIRELPFGSTTESMINSIEAASKAGKV
KISEISDYTGENVEIELKLPRGVYSADVVDALYAFTECEQSIPCNLLVIK
DNLPVQITVTDIIKYHAKQLMQILKDELEYERAMLTERLHLRTLERIFIE
ERIYKKIETMKTAEGVINAVIKGFVPFKKELIRDVTEDDVDKLLKIPIRR
ISLYDINKNREEVREINNRLKEIAKLLKNLKGYAISVLDGIAAKLPAEEF
KRKTEITGFTKVDVKEAVTRDTALRYDEETGYLGTSVTTGKDILRVSPYD
RIFVLRKSGVYTVMDVPDRVFVDTGMWYCGFAEKEELSKVLFTVIYRDSK
TKYAYIKRARVEGYILNRDYLFAPDNTEVLFVSTKLKFSFKLNYAPKPRV
KKIEEEFKADSFAEKGLKAQGVRLSVREVLSAEELSEKKSLIKKAQEKKA
ETKKTVKKEAPIKEKKEAAKKAKPEKTSKTVKNEKTSGAQKTSKTGKKKV
SDK
>TDE2705 ISTde3, transposase
MYTRLTTTKLNRIFLCFSEDITAAATAKITGINRNTVNRYFGIIREKILK
YSIFEQTREISGNVRHISYFKKAKIRRKKIQEFIAARPVLGLLKKGKKIF
VSLVHDDSHESLLSIIKGDLEKLISHQNKIEPFNTSLLKDCDQYRVFYNE
SEIKNEHTAGIENFLTFAKKRLAKFNGFSSGSFLLHLKECEFRYNHRDED
LCALIKKIFKKF
>TDE1721 radical SAM domain protein
MAEVIDGILIGEVETKNIMTKSSLPVGGYSVNPYVGCTHACKYCYASFMK
RFTGHKEEWGTFLDVKHWPEIKNPKKYAGQRVVIGSVTDGYNPQEGQFEN
TRKLLEQLIGSDADILICTKSDLVVRDIDLLKKLGRVTVSWSINTLDENF
KNDMDSASSIERRIASMKQVYDAGIRTVCFVSPVFPGITDFEAIFERVKG
QCDLFWLENLNLRGGFKKTIMDYIAGKYPDLVPLYDEIYNKHNRSYFEAL
EVKAEEMAKKYDCPFVDNEMPYGRVPQGHPVIVDYFYHEEIRGTENTGKR
NR
>TDE0738 conserved hypothetical protein
MTTISAKITQNDKISFERICDSMGINISSAINSFVKATIRENGLPFALKA
SEDPYIYSEENMKYLRKSIHQIETGKCQIHELKETD
>TDE1398 conserved hypothetical protein
MEKAWTLKKNNSGKWFLTFTALIESENCPSADEIHLEAKRKGIKSSSLVS
KKTIEDYLKKHTGSGIEPVSLPLELDPNFDARITTNNDKTAAYLYVRKAA
DSANEVDMSTINRLLQRSNIANIDTEKVKEGLSDFINSSEMEFSMQIAEG
SPPKRGPDKKLITHFEQIPDHEVQRLADRLKRPDLRTPDVENPTTDKDYP
LSEAETLTVVEKGDLIYEVEDAGLGEAGVDVYGQSIPGLPGNDPFFLDLR
NIVQNHSELRAGETGLLLIANTERGLKIRIVPYRDAKVRAVISRDKMEVS
LILQSGLGAGERLSVIGVKTALNEVNLLDSISDAKINEIIESARKVNDEC
EFVILSGTPPIAPGSYRLEWSIKFNEELSTATVEKDALILTARLLPKGEK
GKNVFGELIDPKNAEPTDLPANDETIKVTEEKHVIKFFAAESGELSFFNN
ALVISSLKTIQSDIDTKFGDISFPGNLIITGDIKDDVKVKSKGKLTITGT
VEKALIYSEDSLTLNGGINGKGRGTVWAKDKTDLQYAENARVFSGGDISI
ASYCFKCLVKTNGTVHLTGNPGVLLGGSIHAAKGVSVHDLGAEKTIRTII
SFGQDYLIKDEIEVREKEIEDNNAELAKIEKDLQANPPDVDALRQKKVKL
LKRNSALTVRIFNLKENFEFHIPSKIKVTGSVYPGVVLESHGRYFEVMET
HHNVFFEFDEKNGQIICSPIKEVEVELE
>TDE2244 conserved hypothetical protein
MNKSDKTIPVLLKELKDLESKLTEAYKQLGNKLIKDTADPVAEANGVSQE
NFLQWQKLHDERKFCTESVLDIKNNSTRLSELDSFKKQIKDRLSDTKKET
EKLKGDFLLKLYKDFLPQCGSIFDSLSAEIHTEEAKIHEAQEKIETLNAE
KKEANFFAKIGISGKISSQELKVKNSEKKIKNILTKSDIDIYNSQEVKAL
YDEDKLFPELKKTYEAILKLGSDLSNSESRLKMIDEETGFVTQKLADAGA
DKNSKKRIDNFTSRIKEIDEKIDLILESAGIKYTDKFYSAEGDSALGESS
SDVELGKYAEYLKKAGKYRKEISKTKYNIEFCETMQKIRAEENQIQNLNR
TIKNCENAIKEAEKKIGNSETAIKNSEAKIADLKDFAAGLEEKFLDKTSE
QVTEEE
>TDE0328 cas1, CRISPR-associated protein Cas1
MSWRTVVISNRAKLDLHLNHLVVRGEKTQKVFIEEISVLIIETTAVSITA
ALLNELIKQKVKVIFCDEKRNPASELIGYYGSHDTSEKIRLQIKWDKNIK
QLVWTEVVTEKIRQQKYLLEKLNLPQASLLAEYITDIDINDKTNKEAHAA
KAYFAALFGAGFSRSLDIPINAALNYGYSILLSAFNREIIANGYITQLGI
FHDNMFNPFNLGSDLMEPFRPLVDAEVFKLNPQKFEHEEKLKIVSVINKK
VLINNKEHYLNKAIEIFVHSIFDALNEKDISQINFYRNEL
>TDE0963 dinB, DNA polymerase IV
MATEKVFFHVDIDAFFASVEQLDNPEYMGKPVIVGGQSERGVVSTCSYEA
RKFGVHSAMPILQARKLCPSGIFLRGRMDRYHEKSKEVMSIFKDFTPEIK
QISVDEAFLNMTGMEKIFGTPKNSALLLKKTIKEETGLTVSVGCAQNKYI
AKIASGRSKPDGLFIVKAGEEIDFMKSLPLKDVWGVGGKTRERLIAAGLT
SVPQIFNSSEHLLQSILGNASGSFLFQAVRGELYDVFSDDVKSHSISTER
TFEHDLFSHAEIDDVMFYLASELMYRIFDEKVKGKTVSVKIRYNDFTTVS
VQSTGAVVNDTQDLFERARELFYKKFDNKTPIRLLGLCIMNIESDIPEAQ
TELFYSEKNVKKRKIEETMYTLTKKEGKNILKPARLLKKDKDGLE
>TDE0001 dnaA, chromosomal replication initiator protein DnaA
MSEWDYKIFWDEAVNQFKEELAFSIFSMWFLPSKYEKSTENTVYLSVPSK
FFRDQMIHNYKNGIEKKLFELSGKKISIDFIIKPNTSEDLSKAENEGGND
KKEDAAKPSSAESKKKSVKTEGGRGQHPDLRPEYNFEDFVVGPNNNFGVN
AAIAVSTNPGSAYNPFLIYGGVGLGKTHLMQAIGNKIWDTTKLKVIYVTA
ENFTNEFVECVQKKMMPAFKSKYRKADVLLIDDIHFFQGKVETQEELFHT
FNELYEKNKQIVFTCDRPPAELKNLSQRLKSRFERGLNVDLQTPAYEIRY
AILLKKMEKHSTKIPNEFIDMVAKNVSSNVRDLEAALTKLIAYTELTKKT
MDEATAKNLLRDIFGSTRQRNVTIDLIQRTVADYFSISISDIKSKKRTKS
FSFPRQIAMFLCREMTECSTTELGNDFGGRDHTTILHGCNKIEEQIAADP
SLEKIIHELRNTIKENTNK
>TDE1662 dnaB, replicative DNA helicase
MDSVKNLKNKLPPHNMEAEKAVLGAILIDPDVFTFVRPILDASAFYSPQH
QKIYKAISELDTQSQKADILILTDYLRSVNELDSVGGASYIASLTDEVPS
SANYEFYAKIVLEAAIRRNLLKVSNKISADVFDDSISSRTVLEEAQKSIF
DLTEAGNSATFKSLAEVIMPTLEVLQKLHERKGAYTGVPSGFGNLDNMTY
GFQDSEFIIIGARPSVGKTALAMTMAAHIAIDEKIPTAFFSLEMSDMQLV
QRLIASRAKINSNRIRSANLTARDFGKVSETCGMLYEAPFYLVDMPNMKL
LDLRAIARQLCSPPYNVKIIFIDYITLITGENASIPRHEQIAEISRSLKS
LARELNIPVVALSQLTRDAEGKKPGLADIRESGSLEQDADVVMFLHRERA
DTSEDEAKPIPTELILAKQRNGPIGTVPLLFLSQYTTFVTEAKEK
>TDE2786 dnaE, DNA polymerase III, alpha subunit
MAVDFVHLHVHSDFSLLDGAASVKALAAKAEKLGQTALALTDHGNMFGAI
NFYNACKEKNIKPIIGCEFYVAPESRFEKKETPGGKKYYHLILLAKNETG
YRNLMVLCSKGYTEGMYYKPRIDDELLAQYAEGLICLSACLAGELPVLLL
NGEKEKAEAHVRKYREIFGAENYFIELQDHGLKEEKKASKLLIEMARKVG
VPLVLTNDIHYVEQKDYVAQDILMCIGMKKLRTDTNRMQFEGSEFYFKSG
EEMAQLFPEYPEAILNTVRIAEMCNLEIPQPGPILPIYKIPEDFSSKEDY
IRHLAEEGLKKRYPVITDEIKNRLNYELDIVIKMDFVGYFLIVWDFINWA
KNNGVPVGPGRGSGAGSILAYSLRITDIDPLKYNLLFERFLNPERVSMPD
FDVDFCFERRQEVIEYVRQKYGDENVGQIITFGTLKPKAVVKDVGRVLNI
PLADVNAITKLIPPKPLTDGIKEVTLKYAVDVVPELKEMAEDSQYKELFE
ISIALEGRNRNSSLHAAGIVIGKTALTDYVPLYKDSKTGKVATQFTMDLI
ENCGLVKMDFLGLKTLTLIKHTEDLIHKRGGEWRKFSIGDIDYSDAETFK
MLSEGKAAAVFQFESQGMQNILKRAKPSKMEDLIALNALYRPGPMDYINQ
FIESKFDNSKIKYPDPCLEDILSETYGVIVYQEQVMQVAQRIAGYSLGQA
DILRRAMGKKKIEVMKTEKEKFIKGAQEKGFSREDADRIFEILIPFAGYG
FNKSHAAAYSVLAFQTAYLKAHFPAEFMAANLTNEITSTDKLPEYIAEAE
KMGLKILPPHVNLSDPYFSVSSDGNIIFGLLGIKGVGMQAAHELVEEREK
NGRYKSFIDFLERNDLHTQNKRNLEVMIKTGCFDGLGQERSTLMVNMDGA
VAYASQKKENESTGQGSLFEGSGIKEFSDFVFEKIEEFPKKEKLRLEKEL
MGFYISGHPLDEYRKVIDNSATLDISHLARATSKKRYVLVGMLTGVRQHQ
TKKGAMMGFGTFEDLNGTLDLVFFPKTWEKHRAVLLPETVCGFAGSIDNS
DGESHSFLVDEVLEIDKLQQKALSEVHIELDENITSAKELTGLKDFLYER
SGNCEVYIHVKDEDKAYIIKASPQIRIPSTPEFIEELNMQFGVEQIWLE
>TDE1345 dnaG, DNA primase
MPKISSKTVDAVTEMTDIVSLVENYTRLEKRGANWWGCCPFHNEKTPSFN
VVPDKKMYYCFGCHKGGGTINFLMEMEKLSFMEAVERLAKNAGIEVIYEG
GSYVPDEGAKIKDQILDLYDKVAGSFHFLLTQNPTGKKALDYLLSRNVSP
EIIEKFNLGYSPKDRKWLHSFLLSKNYSQDFLEKTGLFSKNYKKMAFFSD
RLMFPICDRHGKTIAFGGRILEGDGAKYLNSSDMPQYKKGETVFAFHHAL
AEIRKSKSVILCEGYMDVLAFFQAGIENAVAPLGTALTEDQVKLLKSFAE
TFYLAFDSDKAGQEASYKAIKICRSMGVNVRVLYIKDGKDPSEILQKKGK
EGLKFLLECAIVDDDYLIQIASMRFDISSPEGKASAIAFLFPYIEVLESD
IQRESAISKLSSAFGVSQQAIFSDYVNREKKALRHIVDEVKQKPVDIRMN
AELRLVLAVTANTDLFSRLRSQLSPDDFEDFYARHLFIVLEECYRDGAYT
YANLMHRCGEEKLKEIVSQTISKGEFAENSEKIVDDGINFIKQNVLQKQK
DKIIGRLRLLHGEKNIDTVNLTKELMEEKKSIDIQLNKLKGKVYD
>TDE0231 dnaN, DNA polymerase III, beta subunit
MKISFDRDTLLKEISIAQEIIATKTALTILSNVLLSVKDGSLTIKATDIK
VSFETKIPVNIIEEGSTTVFCDKFAGILSSLPAGEVEIEQKDQKLTIKSV
VKKAKFQLKTIPENDFPAFTEPTNVNFFNIPTKEFKEMIHQTIFSVSDDE
TRYFMNGVYIENKEDTLYFIATDGRRLAHIKKNFGIPIPEFKGVIVPPKI
LNIINKRASDEGNIEVGIGEKNIFFNFNSYKFSSVLIDGQFPNYERVIPE
NQNLSFEVSRTEFIEALKRVSLLVELKTRRIFLNILPGSLIISSQENEIG
SAREEIPCKYDGQEVMLALNYVYIEDPLKTITSDRIKVEFTEAMKAITLK
PEPEEDFFHIIMPMQTE
>TDE0295 gyrA, DNA gyrase, A subunit
MEEIQTKEGGAVIPIPIENEVKRAYIDYSMSVIVSRALPDVRDGLKPVHR
RILYSMEEKGLRSSGPTRKCAKIVGDVLGSYHPHGDASVYDALVRLGQDF
SLRYPVIYPQGNFGTIGGDPPAAYRYTEAKMAKIAETMVEDIKKETVDFI
PNFDDSTKEPTVLPAKFPFLLANGSSGIAVGMATNMPPHNLREIADAVSA
YIDNPEIEIDELCKYMKGPDFPTGGVIYGRKGIKQAFKTGRGKILVRGKF
TIEVDKKGKETIVFTEVPYQVNTTTLVSRIGELAREKIIDGIANVNDETS
DRTGLRVVIELKRGAITKVVLNQLFAKTALQSSFGVINLALVNGRPETLN
LKLLVKYFVEHRVDVVTRRTKFDLRKAEERAHILEALIVAIDNIDEVIKI
IRSSRDPQTAKNNLMERFGFDDVQAQAIVDMQLKRLTSLEIEDLRKELQE
LQVLIAHLKDLLAHPEKILALIKEETNEIAEKFGDERKTDIVADEVEELN
IEDLIKKEEMVILISHLGYIKRIPATAYKSQNRGGKGSNSVNLAEDDFLD
QIFTASTHDYIMFITNAGKAYWLKVHEIQEASRTSRGSHIKSLLSVSSDE
EITAVVSLKEFDDKTYLLMATAGGVVKKVTTDNFANAKTRGIIAIKLDEG
DKLVSAILTGGKDEIMLITRRGQALRTSEEDIRSQGRSSRGVTGIKLSSE
DELTGALRVTENQKMLVMTENGYGKRVEFSEFSAHGRGTGGQRIYTLSEK
TGEVVGLLTVFDDDEVVCITGQGKTIRISVDSVGTMGRSAQGVRILDIES
PDMLIGLDVVARDEE
>TDE0002 gyrB, DNA gyrase, B subunit
MTKSNYSANNITVLKGLEAVRKRPGMYIGSTGPDGLHHLVYEVVDNCIDE
AMAGFCDKILVVLEPNDIVRVEDNGRGIPVDIHPTEKISALELVLTRLHA
GGKFDKGSYKVSGGLHGVGVSVVNALSVWMEAKVYKDGFEHYAKFEKGSI
LEPVKKIGETEKSGTVIRWAVDPSIFTETTVYNFEVLATRLRELAFLNSK
ISITMRDERLSTPKEVTFAFEGGISQFVSYLNESKQVFPKSPVFIEGEKN
DILCEVAIQYNDGYNENLLSFVNDINTREGGTHLEGFKTALTRVMNDFLK
KYPKLVKKMDKEEKLTGEDVRAGLTAIVSVKVPEPQFEGQTKTKLGNSDV
RGIVDSFVNEKLTLFFEQNPNEVEKVLEKCVAEAAARIAARRAKEATRRK
SGLDSFGLPGKLADCSLKDPESCEVYIVEGDSAGGSAKKGRDSKTQAILP
LWGKMLNVEKTRLDKVVNNEKLQPIIATLGTGIGKDFNIEKLRYHKVIIM
ADADVDGSHIRTLLLTFFFRYMPQVIEKGHVYLAMPPLYKISHNKKEWYV
YNDDERDSVLDQIGRGNNAAVQRYKGLGEMDGTQLWETTMDPARRKMMRV
TLPDAVEADRIFSTLMGEEVEPRRKFIEENAVYANLDV
>TDE1538 ligA, DNA ligase, NAD-dependent
MAKEKRILDLEKTIKKHQDLYYNAQPEISDAEFDALWDELKALDPQNKLF
FTVPLESTEGFAKSEHIIPMGSQEKAADPPSFEAWALKMPFKEYIVQYKM
DGASLELQYEEGHFVRAVTRGDGKIGDDITENVLKMKGLIKDITVNAGPA
YGTKPFSGGIRCEVIMLRSIHQKYFKDKANCRNAANGLMKKKNGELCEHL
NLFAYDAVQGSIGRPFTGDAPFKTESEKLVWLKKAGFNCVEVKYCKSIAE
VIEYRAHVMDIRPSLDYDIDGLVIKNDTIDPEDMKRARPEKQIAFKFSLE
EAVTVLKEIEWSESGATYTPIALIEPVRLAGTTVKRASLANPNIIKALNL
KIGSRVVVTKRGEIIPKIEALAENPPNVKEIEYPDTCSVCGSPLTNEGTR
LYCPNMSCPKLIHHRIEKWISVLDIRDFGITLIKRLFEMGRVNSITDLYT
LTVEELAAIDRMGKLSAEKVYKALHSKKEISLTEFIAGFDIEGIGETMVE
KLEEAGFNDLNELLGASEADFANVYQFGQVLSHTLVTNLSILKDEMTGLI
DKGYIKIKPPLTSEEGAVLKGLSFCFTGELNTMKRAQAEALVKEKGGTVK
SSVVKGLSYLVTNTPDSGSSKNKKAQELGTAIITEEAFLNLIGKV
>TDE1287 mfd, transcription-repair coupling factor
MPQPLIDSLQSSIRSWKDMKNAFDEIDENSYPYNITGISGGLFGFFLTEY
LYKTRKPVLVVVPTEKEAEAVRADLDFSGIENFVLPWWGSLAYRPISPTA
PVFSERAEVLIRLLESGNESYTKNKPPVFITCQRSFLTPVPPADYLKQNK
VEIAAGSSLDILSLAELLSLWGYIRVPRVSVRGEFALRGEVLDICLASNS
GSEKTAYRIQFDFDKVEKIKSFDIASQGSLEEYKKINFYPVKEVIWNDER
IDCLEKNLKTYSEFSENILKIIDALKEYKTFEGEEIFYPLAFQKSSSVLE
YAELNDIPVFYSDYDRQKNSSEILLREYMGLYKKTKTQFDENEKRKALIS
EYPEPQRILLQFESNVQKYNKSIYFRTLAEQEDKNKTLKFKTDPPRSFFG
NIVYLREELNNLLNDDWSIFVFAESDNQALRIEEILHEDRIKILPYNLSG
GFGIPDLKILVIHENEIFGRRRRIPKSVKTAKSSVIDTFIELNPGDYVVH
VNYGIGKFRGIERVKILDTERDYINLLYANDETVFIPIEQADLVQRYIGN
EGEAPHLDILGSKSWENRKNKVKKSVEDIAAKLIDLYSKRKASTGFAFQK
DDEWQTAFEAAFPYEETDDQLTCIAEVKEDMEKPVPMDRLICGDVGYGKT
EVAMRAAFKAVMSGKQVAFLSPTTILTEQHFETLDKRFKNFPVKLARLSR
FVPKGEQKKVLEKLKKGEVDILIGTHRIIQKDVVFKDLGLMIVDEEQRFG
VKDKERLKQMKHNVDCLSLSATPIPRTLHMSLLKIRDMSVIATPPQNRKP
VETVIAEFNAEKVAEVIRRESERGGQVFYLHNRVESLDETLFMLQSLLPE
IMIETAHGQMSPNQLEEIFERFSLGGFQVLIATTIIENGIDIPNANTIII
DRADMYGVSQLYQLRGRVGRSDKKAYAYLLYPDDKALSEIAMKRLQVISD
FTELGSGFKIAMKDMEIRGAGNLLGREQSGDIYSVGFDLYLRLLDEAVQK
LKNQDYEPVQESVIELEYSGFIPDSYISSPETKMEVYKKIAAVKVQGDLD
RVYSEILDRFGPAPSEVESLLALSEIKIICNHLSIASLKERKAAVRIEFA
RVSKISVDKLLRMIKESAGRVSLDPKAPNVLILQTGKIGLKEKSEFIREK
LGSLM
>TDE2603 mutS, DNA mismatch repair protein MutS
MNKPQTPMMRQYLSIKAKYKDEILFFRLGDFYEMFFDEAVEVSRILNLTL
TKRNDVPMCGIPYHAAKIYIARLLRAGKKIAICEQVTEPVAGGLTERKVV
EVITPGTVAEDDFLEQGSNNYLAAVYCSNKKTEGNSGFDYYAGLAYIDVT
TGNFFATSFPKTDFKEQFLKEIGRINPKEILIQQSIQNEFPALKQILSEF
PSMMQNFYPDWSFNPDQAEKRLCSTFGTENLKGFLLNTDSPEVPPAGLLL
QYLEEISGRDISHISGIKIYAESDFVSLDDSTRKNLELLTNLRDNSPSYS
LFESVNYTKTAMGTRLLRRRISYPLRSKNEIDKRLDKVNSLFKDGKASAI
IRETLSSILDIERLSGRIAMQKTHGKDLLALKQSLNSVIRMGSLIEEKKL
NFLQLNDEEKKLLTEIRDLLENSIDDDCTIALNDGKLIKKGFSKKVDTIK
NIKENAHEILEKYLDDERKKTGINNLKIKYNRMMGYFLEVSLGNISAVPD
YFIRQRSLSNADRFTTESLKQIEDNINNSEERLIEAEKEVFDEVCTEIGS
HHCFLQKLAEEVAELDVNQSFAQAAVLHAWTRPELCSDSGILNITGGRHP
VVENHLRAGDFVPNSIKLLSGENSNPEDETIPSFAVITGPNMAGKSTFLR
QTALICLLAQIGSFVPAEKAVLSPVDKIFCRVGATDNLARGESTFLVEMI
ETAYILNSATRNSLVIMDEVGRGTSMEDGLAIAQAVSEHLLNTIKAKTLF
ATHYHELTRLEHEKIINLKLDVLEAEGKIVFLKKVVHGAAGNSYGIHVAG
LAGIPQSVLTRAENLLYMRSQFQKERTIQEARPSAQGSEEKTPSSPAEKG
LSLFPEEELILNEILSTDPDETAPIKALQLIASWKNRLSGK
>TDE0299 mutT, mutator mutT protein
MNSKKKTKTIRVAAGIICDSLEQKKKFFATAKGYGEFKGQWEFPGGKIED
GETPEQALIREIKEELGVRVRIGALIDTIEYDYPNFHLVMYCFFCELIEG
EIKLLEAESGKWLTKETLYEVSWLPADVILVARIKELIC
>TDE2534 nth, endonuclease III
MNLLDKDKIEEVYRRFKKNNPNPKGELHSANIFTLLVAVVLSAQATDVGV
NKATGPFFKAADTPQKMIELGEEGIREYIKTINLYPTKAKRIFELSRIIQ
NEYSGMVPDSMEELIKLPGVGRKTANVVLNMGFGKPAIAVDTHILRTAPR
IGLSLGKTPIQVEEDLLKVTPKKYLLNAHHWILLHGRYICKARKPECETC
FLSDICMKNL
>TDE0217 ogt, methylated-DNA--protein-cysteinemethyltransferase
MVYEYFDSPIGKILIISDNSGLKELRFIKKESITNLAEQTQDNFTKAAQI
CKQAKEELQKYFEGRLKQFTVQLSPEGTNFQKSVWKELCKIPYGKTLSYK
QIAENLNNPKSCRAVGNANGKNPIPIIIPCHRVICTGGKLGGFSAGLDRK
RFLLYLEQKECQIELIPFVDNL
>TDE0903 pcrA, ATP-dependent DNA helicase PcrA
MNEFTEGLNPEQFKAVTTINGPVLIIAGAGSGKTRVITFRIAHMLDKGIP
QSQILALTFTNKAAKEMADRVKELTGKKLQNLTVSTFHAFGVKVLRSHID
KIGWRSNFSIYDETDRNQLIKECGRELKFSADALDVYKVGILFSNIKMGR
KDWTNEHDSYKALYKEYQDGLKLYNAVDFDDLIMLPIKIFKEHPEVLAEY
RERYRYIMVDEFQDTSTQQYNFMKLIADKNICVVGDDDQSIYSWRGASFE
NIRNFEKDFPEMIEIKLEQNYRSTGTILAAANGVISHNVNRKVKALWSEK
DSGRPIEIFIPENEAAEADFISDMILSLKQREGFKYSDFGVLIRANSLSR
PLEESFLEVNIPYRMSGGTSFFQRKEIKDLISYLRVVANPDDDVNLLRII
NTPRRGIGKKTLETLSALATENSCSMRTAIRLLLENPPEDMRGKSIEDLK
EFAELISTHRTQLLSGKGLAQKVRKLLDDIAYNEYLIAEYQKSEKAAQFK
MMNIESFLHSMDDWENNPDNLDGSLYDYLNRITLLTRDDTEEEKGEVNIM
TIHSSKGLEFPVVFIAGAEDGLIPHARSVEENDGDVEEERRLFYVAITRA
QQKLFITSCRQRRKQGGITECAPSPFLDEIPADLVEYHEPDAQAEEERIA
DIFSQMKKKFSM
>TDE1637 polA, DNA polymerase I
MKDTIYVLDAYGLIYRSYFAFISRPLTNSKGENVSAIFGFFKSLHSIFTE
YNPKLFVTALDSLTPTFRHEMYKEYKATRDKTPDDLHAQIDKIEEILKTF
KLPTVRCNGFEADDVIASIAALAEKEGRECVVISGDKDLMQLVSKTTTML
KPGKIKAWEGFDAENVKEEWGVYPDGMLDLLSLIGDSADNVPGIKGVGPK
TAVKLLEEYKSLDGIYANTGNLKGALKTKIEEGKESAYFSKELIRLRFDV
PVEKDLNAYSTSQMDYEAAARLFISEELPNIAKLYSEKIIAEKNAPSSKE
NLKQETGLFENSEQTSPEMLPQELGTGEEISLPQNKGDYKLVDEAEELFK
IVDEALKQGLASYDCETTSEDPLNAEVCGFSLALKEGEAYYFPLKAPCPE
LGEEAPKLIAFKDAKKAVTKLFDSKMTLIMHNGKFDIQAALSSKLASGIS
ANLFDTMIAAWLLDPARSSYGMDKLAESILGVKTIRFKDLVKQGQNFSDI
PLKEACPYAAEDADITFRFYKKFLPLLKKNNLEKLFFDLEMPITKLLTEM
EIKGIFLKGEELTAYSKELGKELEDCEKDIYRLVGHEFNIASPKQLQEVL
FEERKLTPGKKTKTGYSTDTSVLENLASEDPVPAKILDYRALAKLKSTYT
DTLPKMTDKNGRIHTSFIQTGTATGRLSSRDPNLQNIPIRGNEGRKIREA
FQAEKGRVLISADYSQIELVILAHLSKDQNLVEAFNTGIDVHAKTASLIF
AVDIKDVSQDMRRIAKTINFGVMYGMSAFRLASSLRIPRKRADEFIKAYF
ATYSGVSGFMANVCQEAEQRGYVETLMGRRRYLPAINSKNKVEKAGAERI
AVNTPIQGTAADIVKLAMLEVDKALKKQKLDASILLQVHDELIIEAAESE
REKVMSLVKEKMEGVIKLSVPLRVSIESGMSWGEFH
>TDE2490 priA, primosomal protein N'
MAKWLTLAFNLPLYQSFTYKNIEEDGGSLVGKRASVQLGSRNLIGFIIEE
SDVFPKDSPVGEDKIKPIKRVVDKETIFGQAQIELASWISHFYICSFGEA
LSAILPSGKREVSFENLKWGAEFEDKNFSLSDEQKDAVEKIVNSNKKEFF
YLYGLTGSGKTEVFLKAAEKIIAEGKAVIYLVPEIGLTHQVISAAVKRFG
SQAAVLHSGLTGSERLNQWMRIRRGEALMIVGARSAVFAPAKNIGLIIID
EEHDASYKSGSVPRYHARQTAMYLAVKHNCPVVMGSATPSLEAWNMIQNK
KIKLLSLSKRLAGGSLPQIEIENISGLKGALSDRLISEIRKTKNEGKQTI
LFLNRRGFSHIFRCRSCGYEMLCKNCSVPMTFHKSENVMKCHYCGMQARP
PSLCPECNSLDIGYAGVGTEFIEEEVSRSFPDCTVARIDTDTVSKKNSLE
NRLKDFKDGKIDILLGTQMIAKGLNFPKVRLVGIILADTGLQMPDFRAAE
RSFALITQAAGRAGRFSEDGLVIIQTLKPNHPSIVCAKNHEYEKFYEYEL
GQRKLLDFPPFKRLIRLVFRSKDLKKAELAAEGAANILKYILSSQNKDEA
EIMGPSECVLSMIAGNHRQQILLRSSNFPLIQTAASRFVKEYKPMTGIYI
EVDTDPVNLM
>TDE0973 radC, DNA repair protein RadC
MIDYKNSSNTDKPDMRERLLEYGPQNLSDSDLVAILLRTGIKDKPVKELA
DDIILHIDRARPEKIEGYLRSIRGMGDSKISTVLAAMELGRRYYDNKNRT
ISHPTDVVPLLQHYADRDREHFICVSLNGANEIIATRVVSVGTINRTIVH
PREVYSDPLKDRAAAIIAAHNHPSGNLEPSSEDMELTKRIYEAGKILGIK
LLDHIILVPNGNFFSFVQSGTRFDI
>TDE0872 recA, recA protein
MAKAKNEVPAVANPDDKLKALEAARLQIEKQFGQGSLMKLGNNSAIGNIE
IIPSGSILLDEALGIGGYPRGRIIEIFGPESSGKTTIALHAVAEAQKQGG
IAAFIDAEHALDPQYAKALGVNIDELWVSQPDTGEQALEIAESLVRSGAV
DVIVIDSVAALTPQAEIAGEMGDSHMGLQARLMSQALRKLTAIIGKSNCM
IIFINQIRMKIGVMFGSPETTTGGNALKFYASVRLDVRKIETLGKDDDEA
WGNKIRVKVVKNKVAPPFRKVEMEILFGKGVCPYGSLLDSAVKQEIIGKS
GSWYSYGDDKIGQGRPNAVKFLEENIDIAQKIEKELREKLFPGRPFVSSF
VEKTKEQKEAQEKAVEALKKEEGSKEDALTGNKDETDDSAQKNSAASKAK
RAEVVGLPADDSLF
>TDE0230 recF, DNA replication and repair protein RecF
MPFLSASFYNFRNLENATVDISSPEVFLVGKNGQGKTNFLEALYVSSYGT
SFRTRSLAQICTKDEKEFSIRALYKESDNISHTISIIIQDKKKDIQKNFK
KIKNSKELISTIPCILFHGDDIEFAVGTPSRKRFFIDQSVSLCNSDFIEV
LVKYSKALKSRNVILEQKKASLLDSIDEIFASLALLITNERKNIVEEYAK
HFSLIYEEISGVSGVEMVYRPSVKVESEEDLLILLAEKRQNDLIDRTSST
GPHRDRIHFIKDKKPFTERASNGQRRLISLVLRMIQAKIYSEKTGRKPIF
LMDDILLELDPEKRQKFMELLPPYEQLFCTFLPGEPYKNYQKENTKIFFV
EDGKFSVERG
>TDE2579 recG, ATP-dependent DNA helicase RecG
MLISEIQGPLTNIAGVGAAAVSQLKRLGVENAGDLLRLFPRDWEDRSKIN
VLLDWNKFQKIHVEITVAGHEWFGFGKMKTLKLIVADKNGMTASLICFNR
PFLEKSFPVGARAFVYGSFYRKYGEIQSSAFDLEKPENMQSKILPVYPLT
SGLGQAKLRKIIASALKMYAHGIDSELPESILQKYGLPPKQEVLFMLHTP
KSMAEVEKGRYALIFEEFFLFQYAIGMRSIERRGRLPNLEDERNIDKTVK
KEPVLRPLQSSLLERLNFKLTQDQLSVCAEINEDLDGPNPMARLMQGDVG
SGKTLVAFLACLKVIEQGGQTAFLAPTELLARQHAENAARLLEPLGIRLA
FLTGNTKAKGRSRLLQELQKGNIDLIIGTHSLFSQGVQYKNLRLAVIDEQ
HRFGVLQRSAIIQKGAESNEEKRSPHLLMMSATPIPRTLALSIFGDLDIS
TIKTMPPGRKPIITYVAGEDKAERVYNFIGQEILQGRQAYFVYPLIEENE
DLSLKSAERMFEELKTGFPNHSLALIHSKVAEEEQKRIMEEFRSGKLNIL
VATSVVEVGVDVPNATCMVIEHADRFGLSALHQLRGRVGRGDLQAYCFLI
YGKKITEDGRARLTVMKETNDGFIIAEEDLRLRGPGDIGGVEQSGYHLGF
TIADPARDFKILQEARSAAFELLEQTKF
>TDE2190 recJ, single-stranded-DNA-specific exonuclease RecJ
MDWQKKEIGPELVNEIKRKYGCDPLTSAILVRRGIIEGKDILFYLEDDMR
YLHSPFLFKNMEDAVDRILDAKEEGEKVLIFGDRDVDGITSTTLLYEALK
DMGLDVSWRIPTGDESYGLSMEAVEKHAANDGTLIITVDCGISNFKEIEK
ANSLGIDVIVVDHHTPQENLPEAAVIINCKMPDSGYPHENLSGCATAWKL
ITALRFGMQPFYKQQVSLLNVRPVNDAYSIEAVKLVNMVQIGKITETIVP
GMLSFSETRLGSFLNGQQIFVWDAPLQKKQLKNIFGNGIEFNFFDFQPEV
AKQFPQMGDMSLLRLKEFSTIGKYYEDAQSELETFKNIFITFIQQKNNFY
GKREASEIQLVALSTLADLMELTGENRIIVKQGLKEINKKPRLGLVDLMA
MQKLLGAPIGTEEIAWNISPLVNASGRMGRPETAIELFLAQDSGERTAKA
QEIFQMNEDRRALGSKAWEIALPLAIESLKEYNEKLVVAVSAEFHRGITG
ILAGKLAEYFKLPALAICLMPDGSAVASIRSARGFRLLDFLEPYSELFLD
YGGHDFAAGFGIEQEKLTKFLESLKQFSGSMEFENDADSETLTIDAELPH
DYLKPEILHLVDKFEPYGCNSPALTFMTKRVKILNANIIGKAEPLHLRFN
LECGKYKWNALYWKAAEKLGTEFKVGDYADIVFNVSKNYFNGTVTPKMVI
KDLKKIDYVN
>TDE1301 recN, DNA repair protein RecN
MLENISVKNIALIDSLFVEFENGLNVLSGETGAGKSILIGSLTFLLGGKT
STDLIRSGTDEAAVSGSFFIGNEHSEALKWLADHGIEPENSRILIRRNLK
QNGRSNAWIQSTPVTRNELEDFTSLLVDIHGQHDHQSLFRIVEHRRFLDS
FAGINNEVKMFTSLYAELAEKRTELENLNLSEKELAEKQELLQFAIDEIT
KAKLKEDEKEELEAEEKRLNQFEKLFEALNTASQLFSDESGIISLTKKAM
HNLETAKNCDEGLEDLSKRLETGYYELDDISSSIDSYLSKLIFNPERVEQ
VQERLSLIYKLTKKYGATIHDVLNYAQNAEEQLESLSKREAGKSELEQKI
GILQSKLLKLGRILSEKRKEASSKLQKEVEEVLSNLGMPKTKFQVRVDTR
LPEGNKLSANPYGFDDIEFMISPNAGEPLRPLAKIASGGELSRVMLALKT
VLAEGDEADTLIFDEIDTGIGGEVAVNVASHMKKLSKKKQILCITHLAVI
ASHADNHIKIEKNTIGQTTKTSAAAVSGKARLEEIARMLAGDELSEASLR
HAEELLLKYVR
>TDE0436 recO, Recombination protein O
MANRSWSSEALVLSLKTFGEGHRNALLLLPYTEHSCQLVDAAVFGGPKSK
LRSMVIPYHTGEVWIYSNPIKNSNKISDFKVSDYRIGLSDNLTRIWCAAF
AAELAVKLKGNIDWQIINSFLTGIAVSSENECRKALLRFLWRVISLSGLA
PDMEHCCRCGIRVSSKMPETDYLNKSVSAFSYAEKNFFFVPHEDSCVCSS
CLDKHEPAFPLSGESLLYLFAVQNLIPKISRELNLSDQAYAELKDFLFYL
IRLAAGSNFKTLESCDFLL
>TDE0326 recQ, ATP-dependent DNA helicase RecQ
MTRGSKGSDSKKKLASPEDILKQVFGYDEFRPFQKEIIDSLLQKKDVLAV
MPTGGGKSLCYQVPALIFEGVTIVVSPLISLMHDQICGLETIGVEAVALN
SSLDWEKYADNIRRIKNGEVKILYVAPETLASDRCKELLSSIKVDCLTID
EAHCISEWGHDFRPEYRQLAEIRKLLKESACLAITATATEKVRSDIKKIL
KLKTPKEFVAGFNRKNIFLEVKEKQKPFEQASDFLKEHKGESGIIYCFSR
KQADTLAVQLSVLGYNAKPYHAGLSDELRQKTQNDFINDDIEIIVATVAF
GMGINKPNVRFVIHFDLPKSIEQYYQEIGRAGRDGNPAHALLLFSAADIF
KLKFLMQDKSPDEVKKAESMLSAISNYAQANSCRRRAILKYFGENISEEK
LKEIQGDAPCCDFCSREKIEKTDLTVPVQKFLSCVVRTGCRFGASYIIDV
LLGSKQKRILENKHNDLSVWGIGTEFNREGWFNLVRILLAEDYLVKDEDY
SVLSLTQKAKEELQARTSIMLPFNYEKDNSVKKEVKEKSKPQTSENTLDA
CSKAIVDALKQKRRELADEARVPAYIIFSDKTIFDLGLKKPTTTTDLDNI
FGIGKAKKDKYGDIILKTISSARKNK
>TDE1549 recR, recombination protein RecR
MNAIDAVIDSFSRLPGIGHKSAARIAYHLLKQGPADALRLAEAVSTLHEK
IHPCTICGSYTEDEICSICADETRDRATICVVGFPQDVNTISSIPEYRGL
FHVLGGLIAPLEGIGPDQLHISELIRRIHEGGITEVILATNPTIEGDTTA
LYIQKILQDLPVNITRLASGLPVGGDLEYADRLTLARSLNGRIKF
>TDE2570 rnhA, ribonuclease HI
MNIEIYTDGACSKNPGPGGWAYIMVNKDSKEEICRENGGEKSTTNNRMEL
MAVIRALKKIKEGAASLADKSGKALDYKSISVHTDSQYVQQGISSWIFNW
KKNNWKTASKQPVKNQDLWQELDSLSASIKPEWIWVKGHAGNPLNEACDR
LAVEACQKMM
>TDE1547 rnhB, ribonuclease HII
MLCGIDEAGRGPLAGPVTAAAVILPSSFDFSILKDSKKLTEKKREEVRKT
IYADPNVIWAIGWASNYEIDEINILQATFLAMERAYEGLYLKLQEFCKLN
NDKFIEPDIIVDGNFIPNIKNCSSIKALVKADDSVYEVMAASILAKTARD
RMMIRYSWIYPEYGYEKHKGYGTKKHIEAIRFNGYSPIQRRSFFVKNL
>TDE1863 ruvA, Holliday junction DNA helicase RuvA
MFNSISGILSGKTTDSVYVENSGIEWEIFVSALALDALGTVGKEVKVYTW
LYHREDQMRLFGFPNQAERSLFLDLTKVEGVGPRQALKIMSGLNSSSLEK
ALEEGDLDTLQKAPGVGKKTAQKMILALKGKLTNLNEVSSKGQASVSCEY
EDIVTALTEMGFERKSVIVQVEKIAEEMKAAGSDPLKNEEELFRRSIVAL
S
>TDE1914 ruvB, Holliday junction DNA helicase RuvB
MSDDFEVVRPEEQAGDEKDRDLRPRSLVDFQGQTKAKENLSVFIKAARER
GESLDHLFLIGPPGLGKTTLAQITANELGVDFKVTGAPALDKPKDLAGIL
TTLTERSVFFIDEIHRLKPAIEEMLYIAMEDYELDWIIGQGPGARTVRIP
IPPFTLVGATTRAGMVSSPLISRFGIVQRFEFYSHEELASIISRSASILE
IEIEKKAAIALARCSRGTPRVANRLLRRMRDFAQVAGKSSIDEMTVAAGL
KQLNIDGLGLETYDRQILRSIIENYSGGPVGAETLAISIGESQDTLEDYY
EPYLIQSGLLQRTPRGRMVTLKAYEHLGLNPPKLGDGQEGLFD
>TDE1864 ruvC, crossover junction endodeoxyribonuclease RuvC
MGILKAASSKKNLRPCVIGIDPGLANTGYGIISFSNNRFECIEYGSISTE
PHLLQGERLLKIFDKVSELIEKYRPKEAGIETLYFAKNATSAMSVSEARG
VVLLALAQGGVRVGEYAPNSIKKAVTGIAQAEKRQVQEAVKLILGLKEIP
RPDHAADALAAAITKINLGDVGEVRAYV
>TDE1677 ssb, single-strand binding protein
MADINHVVLVGRLTRDAELKYTSSGIAVCNFAIAVNRRRKTGDDWSEEAS
FFDVVLWGRQGEALNQYLVKGKQVAIDGELRQNRWEQDGQTRSKVEIVAN
NIQLVGGSAGQGGQSQAAPQRQGSYQGGGNNSYNDGNQAPSAYQRRQEPS
YDDYQPDMGNSDLDNIPF
>TDE1268 tdeIR, type II restriction endonuclease TdeI
MIYRFDISLIKKYHSKSQIVRVLTEDWVLRNFNCPICGKLKIEAYPNNYP
AGDFFCKNCKSDFELKSKESISGKLPNIITDGAYKTMIERITSYRNPNFL
FLTYKDYEVSNFILIPNHFFTPSIILKRKPLSNTARRAGWIGCNIDISKI
PDAGKIFIIKDQIETDSKEIINKYAKIKSLKKTNIESRGWLLDIIACIEK
INTEEFSLNQIYAFENELKLKHPENNFIKDKIRQQLQYLRDKGFVKFLER
GKYKKL
>TDE1208 topA, DNA topoisomerase I
MENTMNETKKTKRTAKKTKQHCLVIVESPAKAKTIEKYLGGDYIVRASMG
HLIDLPKSRLAIDIEHNFTPEYITVRGRAKILKELKKEAKKSSSVFLASD
NDREGEAIAFHLHEALLPECSSPIKRIVFNEITPNAIQEAVKNPMDIDMG
KVNAQKSRRVLDRLVGYNLSPLLWQKVKNGLSAGRVQSVALRLICEREEE
VENFIPDEYWTLDGDFKYNKTSFEAQLVKYKDNKPELKNQKEVDAIIKEL
KSLPAVVDDIKITEKSIKPRPPFTTSTLQQVAANRIGFTSKKTMQVAQQL
YEGVAVGSTRVGLITYMRTDSIRISDTAIEAVRKWINENHPKELPDGPNV
YAAGKKAQDAHEAIRPTYIEYTPSYLKEFLTRDQLRLYSLIWERFVSSQM
KNAKTKTSSYEIKVGDAVFRAASTKITEKGFYTVTKTLISKDEKGTSLPS
MKVGDEISIESLRPEQHFTQGPARYTDASIVKMLEEKGIGRPSTYAPIIS
VLLERYYVTRSNKQLVPTQLGRIINNLLVKNFSEIIDVNFTAGMENRLDE
VAENKIEWPKLMESFYGSFKEKVDTALENVESIKGSLDEVTDIVCEKCGN
KMVKKLGRFGVFLACSAFPECKNTKSIPLAKCPREGCGGDIIARKSKKRG
KEFYGCTHFPECDFISHFKPINASCPKCGWFMVEKYDKKNGNYKACINPN
CDYLHSVVEGVEDVEVDRSNE
>TDE1010 uvrA, excinuclease ABC, A subunit
MNNKNQSGHLNKLIVKGAREHNLKNIDVELPRDKLIVISGLSGSGKSSLA
FDTIFAEGQRRYVESLSAYARQFLGRMDKPDVDYIEGLSPAISIEQKTTH
RNPRSTVGTVTEIYDYYRLLFARTGHAHCPSCGKEIKEQTVDQIIDTIMS
WPEGTRVQILAPIIKGKKGEHQKIVSDAIAAGFVRARIDGLLVNLEDGVK
LDKQKKHTIEIIVDRIQLSKDVRKRLSESVETALESSGGTLLATRQDDKD
SPVTEVFFSQKNACSDCGISMPELQPRLFSFNNPIGACPECTGLGMTQHF
DQDLIAPDKSLSFNEGVFVPYNPESDWNRVRFEALAAQFDFSLDTPLNKL
PKKIQTIIWEGSGDTKIQFSYTSKSGSGKYSYNRPWPGIMADMNRKYNES
YSASIREYYEKFMSIKPCKTCGGMRLKPEVLAVTVGNKNIHDLTCLSVGD
SIEFFEKLKLTETEEHIAFQILKEIKARLEFMKNVGLDYLTLERKAATLS
GGEAQRIRLATQIGSSLIGVLYILDEPSIGLHQRDNQRLIDTLLYLRNLG
NTLIVVEHDEQTLRTADYIVDLGPGAGVHGGNITAQGTPDEVAKVKNSLT
GQYLAGTLKMDIPKERRKGNGNALELSGVSEHNLKDVSIKIPLGAFTCIT
GVSGSGKSTLLTDVLYPAVSNKIMRSSIPEGAYKKLSGLEHIDKVINIDQ
SPIGRTPRSNPATYVGVFTGIRDLFASLPESKARGYKPGRFSFNVRGGRC
EHCQGDGTLTIEMNFLPDVYIACDVCRGKRFNKETLDVRYKGKNIADVLD
MTIEEASEFFAPIPHIARKLQTLLSVGLGYIKLGQSALTLSGGEAQRVKL
ANELAKRSTGKTLYILDEPTTGLHFADVKQLMQVIHRLIDQGNTVIMIEH
NLDVILQADKIIDLGPEGGTNGGQIIAEGTPEEVAKIKKSYTGYYIKEML
ERVR
>TDE1369 uvrB, excinuclease ABC, B subunit
MKQFKLISDYKPSGDQGEAIKALSDGIIAGDKFQTLKGVTGSGKTFTMAN
IIQAVQKPTLIISHNKTLAAQLYREFKTFFPENAVEYFVSYYDYYQPEAY
VPARDLYIEKDASINDEIDRLRLSATFSLMERRDVIVVSTVSCIYGLGLP
ESWRDLRITIEKGENIEIEKLKKQLISLQYERNDAVLERGRFRVKGDVME
IFPAYMEDAYRLEFDWEEIVRIRKFNPISGEVIQEYEELSIYPAKHFVMP
EDAIPNALERIKKELEERLNVLNKEGKLLEAERLKTRTEYDIEMLSEMGY
CPGIENYSAPIANRKPGEPPATLFHYFPDDFLLFMDESHVTFPQVGAMYE
GDRSRKQNLVDFGFRLPCALDNRPLKIDEFEKMLNQAVFVSATPGPKEIK
YSTRIVEQVIRPTGLLDPIIEIHKSEGQMEHIYGEVKKRIALNERSLILT
LTKKMAEDLTDYLTGLGLKVKYIHSEVETIERVEILKGLRAGEFDVLIGI
NLLREGIDLPEVSFIGILDADKIGFLRSTTSLIQIVGRAARNENGKVVMY
ADRISDAMKETIEETNRRRAIQEAYNKEHGITPKTIKKAIEDILTRENEI
KKEAALAEAGPLINSLNILNPADRKKLIKKLEAQMAEYADMLMFEEAAVI
RDKIEEVKRIGS
>TDE2478 uvrC, excinuclease ABC, C subunit
MAEITTREKLHEVALSAPKTSGVYLWKDKAGTVIYVGKAKSLKNRLSSYF
TSNRDIKTRILVSRAESIEYIQTENEYEALLLENTLIKKHKPRYNINLKD
GKTYPVLKLTNEEFPKVYRTRNIKNDGSKYFGPFPNVSAVDMFLTLIKHN
YTLRQCKQLKKRETPCLYFHIGRCKAPCCGKISAEEYGKDIEEITLLLEG
EMEDVSGTLKEKMKEAAEKKEFEKAARLRDGIQAVYALRGQNIVQDMDPE
SRDYIAWAFEGAMVSIAVLKMRNGRLVGRDLYRSHSLKEEGEILSEFISA
YYTSANEVPPKIFIPQAAEGNALIEKWLNEELHAKTRISIIPLEKESLAA
EERSAADSLTEIEEAASKTIGYAVKEPAPLSAQEEKLNLSPAEIKHHKAA
LKMARFNAKEDAMRRLREQGDFAAVEDLQKRLNLPCLPQRIEGFDIAHLG
GTFTVAALISFKEGNPDKKNYRIFRLKNTDGVIDDYASMREVIARRYTRL
LNEGADLPDLILIDGGIGQVNAASKIVDALDLGIPVIGLAEKNEEVYFPH
NSKPVILPRRSDALRLLQRIRDEAHRFSNTRNNKLRRANKLKTEFENLPH
IGKKRAHVLLKAFGSTENLKTLTAQALSETAKISLKQAEEVLDAVKTTNN
NN
>TDE1205 xerD, integrase/recombinase XerD
MQLFQEHMSDSLIENATEADCIDFILHRSESGIMAKTIAKDIAALNSFFR
FLIIEGVRKDNPSESIERPKREKTLPRVLSPDEVDSLFAAIPLDSPNNIR
DRALFELIYSAGLRVSEIVNLKMEDIFYDEDLIKVTGKGNKERIVPFGSA
AKYWLKQYILEARTELLKPKHPENTLISGSVFLNNRGAVLTRKGIWKRIN
ELSNFSGIETKVHTLRHSYATHLLAGGADLRSVQCLLGHSDISTTQVYTH
IEDKSLQMYHNKFFDTKKLERGIK
>TDE1017 xseA, exodeoxyribonuclease VII, large subunit
MAQTYSVYEITLQIKELLESGFGYVSIEGEISNFRPSAAGHLYFILKDEK
ASIQAVMFKGKTRSLSFVPKDGMTVKAEGAISVYEQRGSYQIIIEEMSLA
GEGNILKMLEERKKKLAAEGIFDSERKKPLPYFPKRIAVITSPTGAAVRD
IINVVKRRNEKIGIVVLPAIVQGEEAAPVLIRQLKIADEKNLGDLIIIGR
GGGSLEDLLPFSDEELVRAIAACKTPVISAVGHEIDWALSDFAADMRAPT
PSAAAELAAPILNDIMYSIAVNREDLTQNIENRIERIRLMLNNFKPDSLE
LRFRNIQQPLLARFDNAKEEILSGMQERCKDLRQRLLVLNKILEGANPQG
ILDRGYSIVRNAQTGKTIRSFSQVKEGEALLIQPSKGTIEAEVKRVSS
>TDE2066 xseB, exodeoxyribonuclease VII, small subunit
MKKFEERLEKLEKISDDIRSSDIPLEKALSLFEEGIKLAKGLEKDIEKME
GKIEVLLNQPVLPEEEPELDLFTVTETV
>TDE1734 xth, exodeoxyribonuclease III
MNSIISWNVNGIRAVEKKGFLDWLNTENPDVLCVQETKAAKAQLSKELTE
PDLPNGKYFAYWASAKKAGYSGTAIFTKKEPLQVRTMGLKEFDDEGRVLV
ADFDKVSIISAYFPNSQDGGARLDYKLDFCAAILEFCDSVQEEGNNVILC
GDFNIAHKPIDLANPKSNEKNPGYLPEERAWMDEFTSSGYTDTFRHFCKE
PAKYTWWSYRFRAREKNIGWRLDYHCVNDSFLAKIKESIILDGVMGSDHC
PVKLIY