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2024-05-20 11:24:43

Gene list

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COG category: Cell wall/membrane biogenesis
Organism: Borrelia afzelii, PKo

Number of genes found: 44

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Borrelia afzelii, PKo
NameLocus tagProduct / DescriptionUniProt / TrEMBL protein nameGenomic elementTypeBeginLengthStrandGC-content
NA BAPKO_0849 hypothetical protein PKO-g-P-chrIn1v1.w1 CDS842064 534 + 0.237828
NA BAPKO_0613 hypothetical protein PKO-g-P-chrIn1v1.w1 CDS602358 789 - 0.257288
NA BAPKO_0809 hypothetical protein PKO-g-P-chrIn1v1.w1 CDS806756 888 + 0.265766
NA BAPKO_0475 conserved hypothetical protein PKO-g-P-chrIn1v1.w1 CDS476471 843 + 0.278766
NA BAPKO_0119 zinc protease, putative PKO-g-P-chrIn1v1.w1 CDS115155 1302 - 0.271889
NA BAPKO_0466 nucleotide sugar epimerase PKO-g-P-chrIn1v1.w1 CDS466704 1068 + 0.297753
NA BAPKO_0269 hypothetical protein PKO-g-P-chrIn1v1.w1 CDS269382 2169 - 0.266482
NA BAPKO_0836 stage V sporulation protein G PKO-g-P-chrIn1v1.w1 CDS826318 294 + 0.306122
NA BAPKO_0709 hypothetical protein PKO-g-P-chrIn1v1.w1 CDS706802 960 + 0.272917
NA BAPKO_0891 hypothetical protein PKO-g-P-chrIn1v1.w1 CDS896724 3402 + 0.259847
NA BAPKO_0477 lipopolysaccharide biosynthesis-related protein PKO-g-P-chrIn1v1.w1 CDS477310 1149 - 0.248912
NA BAPKO_0272 conserved hypothetical protein PKO-g-P-chrIn1v1.w1 CDS274130 1254 - 0.261563
NA BAPKO_0144 hypothetical protein PKO-g-P-chrIn1v1.w1 CDS142381 1236 - 0.281553
NA BAPKO_0255 hypothetical protein PKO-g-P-chrIn1v1.w1 CDS250131 1026 - 0.309942
NA BAPKO_0710 hypothetical protein PKO-g-P-chrIn1v1.w1 CDS707745 1008 + 0.259921
NA BAPKO_0317 conserved hypothetical protein PKO-g-P-chrIn1v1.w1 CDS313298 891 - 0.285073
NA BAPKO_0265 hypothetical protein PKO-g-P-chrIn1v1.w1 CDS265011 945 + 0.28254
NA BAPKO_0665 N-acetylmuramoyl-L-alanine amidase, putative PKO-g-P-chrIn1v1.w1 CDS658636 2043 + 0.284875
NA BAPKO_0848 outer membrane protein PKO-g-P-chrIn1v1.w1 CDS839578 2466 + 0.290754
NA BAPKO_0246 apolipoprotein N-acyltransferase, putative PKO-g-P-chrIn1v1.w1 CDS241352 1569 + 0.297642
alr BAPKO_0161 alanine racemase PKO-g-P-chrIn1v1.w1 CDS159571 1101 + 0.244323
ctp BAPKO_0367 carboxyl-terminal protease PKO-g-P-chrIn1v1.w1 CDS365769 1434 - 0.300558
dacA BAPKO_0638 serine-type D-Ala-D-Ala carboxypeptidase PKO-g-P-chrIn1v1.w1 CDS634538 1206 + 0.277778
ddlA BAPKO_0203 D-alanine--D-alanine ligase PKO-g-P-chrIn1v1.w1 CDS199396 1086 - 0.294659
divB BAPKO_0311 cell division protein PKO-g-P-chrIn1v1.w1 CDS308653 744 - 0.239247
gidB BAPKO_0179 glucose inhibited division protein B PKO-g-P-chrIn1v1.w1 CDS178375 627 - 0.253589
gtaB BAPKO_0214 UTP--glucose-1-phosphate uridylyltransferase PKO-g-P-chrIn1v1.w1 CDS208107 837 + 0.27718
lgt BAPKO_0369 prolipoprotein diacylglyceryl transferase PKO-g-P-chrIn1v1.w1 CDS368844 972 + 0.313786
lgtD BAPKO_0603 glycosyl transferase PKO-g-P-chrIn1v1.w1 CDS588861 1065 + 0.265728
mraY BAPKO_0314 phospho-N-acetylmuramoyl-pentapeptide-transferase PKO-g-P-chrIn1v1.w1 CDS310533 1056 - 0.303977
mreC BAPKO_0760 rod shape-determining protein PKO-g-P-chrIn1v1.w1 CDS757031 846 + 0.27305
murA BAPKO_0501 UDP-N-acetylglucosamine 1- carboxyvinyltransferase PKO-g-P-chrIn1v1.w1 CDS494676 1284 + 0.345016
murB BAPKO_0630 UDP-N-acetylmuramate dehydrogenase PKO-g-P-chrIn1v1.w1 CDS624795 912 - 0.278509
murC BAPKO_0870 UDP-N-acetylmuramate--alanine ligase PKO-g-P-chrIn1v1.w1 CDS867116 1407 + 0.263682
murD BAPKO_0616 UDP-N-acetylmuramoylalanine--D-glutamateligase PKO-g-P-chrIn1v1.w1 CDS606144 1356 + 0.280236
murE BAPKO_0204 UDP-N-acetylmuramoylalanyl-D-glutamate--2, 6- diaminopimelate ligase PKO-g-P-chrIn1v1.w1 CDS200483 1518 - 0.3083
murF BAPKO_0315 UDP-N-acetylmuramoylalanyl-D-glutamyl-2, 6- diaminopimelate--D-alanyl-D-alanine PKO-g-P-chrIn1v1.w1 CDS311606 1392 - 0.270115
murG BAPKO_0815 UDP-N-acetylglucosamine--N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecapr PKO-g-P-chrIn1v1.w1 CDS811939 1092 - 0.282967
murI BAPKO_0101 glutamate racemase PKO-g-P-chrIn1v1.w1 CDS97593 786 - 0.284987
pbp-1 BAPKO_0138 penicillin-binding protein PKO-g-P-chrIn1v1.w1 CDS133618 1887 + 0.286698
pbp-2 BAPKO_0762 penicillin-binding protein PKO-g-P-chrIn1v1.w1 CDS758358 1800 + 0.311667
pbp-3 BAPKO_0776 penicillin-binding protein PKO-g-P-chrIn1v1.w1 CDS775363 2772 - 0.308081
rlpA BAPKO_0779 rare lipoprotein A PKO-g-P-chrIn1v1.w1 CDS780504 813 + 0.296433
tpn50 BAPKO_0168 outer membrane protein PKO-g-P-chrIn1v1.w1 CDS169002 1170 + 0.267521