SGB - The Spirochetes Genome Browser - Gene list

Title

+ Borrelia afzelii, PKo

+ Borrelia burgdorferi ZS7, ZS7

+ Borrelia burgdorferi, B31

+ Borrelia duttonii Ly, Ly

+ Borrelia garinii High passage (300), PBi

+ Borrelia garinii, PBi

+ Borrelia hermsii DAH, DAH

+ Borrelia recurrentis A1, A1

+ Borrelia turicatae 91E135, 91E135

+ Leptospira biflexa serovar Patoc strain Patoc 1 (Ames), Patoc 1 (Ames)

+ Leptospira biflexa serovar Patoc strain Patoc 1 (Paris), Patoc 1 (Paris)

+ Leptospira borgpetersenii serovar Hardjo-bovis JB197, JB197

+ Leptospira borgpetersenii serovar Hardjo-bovis L550, L550

+ Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130

+ Leptospira interrogans serovar lai str. 56601

+ Treponema denticola ATCC 35405

+ Treponema pallidum

+ Treponema pallidum subsp. pallidum SS14, SS14

+ COG functional categories

+ (Clickable) linear whole genome views

+ Horizontal gene transfer (predicted by SIGI-HMM)

+ Sequence retrieval

+ Advanced search

+ Sequence similarity search

+ Best bidirectional hits (protein-based analysis)

+ Gene core sets (protein-based analysis)

+ Gene partnerships (DNA-based analysis)

+ Protein variations (protein-based analysis)

+ Synteny analysis (protein-based analysis)

+ Gene conservation (protein-based analysis)

+ Codon and amino acid usages (DNA- and protein-based analysis)

+ Alignments of whole reference and target genomic elements (DNA-based analysis)

Gene list

Applied filters:

COG category: Extracellular structures
Organism: Borrelia garinii High passage (300), PBi

Number of genes found: 1

Free access


Show UniProt / TrEMBL protein name		View as list		View in Fasta format (Protein)


# Borrelia garinii High passage (300), PBi

>PBI300a20b10.r1_22 ospB, outer surface protein B
ATGAAAAAATATTTACTAGGATTTGCTTTAGTATTAGCTTTAATAGCATG
TGGACAAAAAGGTGCTGAGCCAAAACACAATGATCAAGAAGTTGAAGACT
CCAAAAAAGATCAAAAAGACAACTCTAAAAGGGATCTTCCTTTGGTAACA
GAAGACACAGTAAAGTTATTTAATAATAATGAAATTTTCATCAGTAAAGA
AAAAAATAAAGATGATAAATATGAATTAAGATCAATAGTGGACAAGGTTG
AGCTTAAAGGCCTTTCTGAGAAGAATACTGGCGCTGGAAAGCTTGAAGGT
TTAAAAGCTGACAAAAGCAAAGTAACAATGTTAGTTTCTGACGATTTAAA
TACAGTAACTATAGAAACATATGATACAAACAACAGAAAAGTTTTAAGCC
AAGTGGCTAAAAAACAGGGATCACTAACAGAAGAAACTTACAAAGCTGGT
AAATTAAGCGCAAAAAAAATAACAAGATCAAACGATACTACAATTGAATA
TACAGAAATGACAGACGCTGACAATGCTTCAAAAGCAGTAGAAACTCTAA
AAAATGGCATTACGCTTGAAGGAAGTCTTGTAGGTGGAAAAACAACCTTA
ACAATAAAAGAGGGCACTGTTACTTTAAAAAAAGAAATTGAAAAAGCTGG
AACAGTAAAACTCTTCTTAGATGACACTACAAGTGGTACTACTAAAAAAA
CAGCTGTATGGAACGATACTTCTAACACCTTGACAGTTAGTGCTGACAGC
AAAAAAATCAAAGATTTTGTGTTCTTGACAGACGGTACAATTACAGTACA
AAATTACGACACAGCAGGCACTACGCTTGAAGGCAAAGCAACTGAAATTA
AAGATCTTACAGCACTTAAAGCCGCTTTAAAATAA