SGB - The Spirochetes Genome Browser - Gene list

Title

+ Borrelia afzelii, PKo

+ Borrelia burgdorferi ZS7, ZS7

+ Borrelia burgdorferi, B31

+ Borrelia duttonii Ly, Ly

+ Borrelia garinii High passage (300), PBi

+ Borrelia garinii, PBi

+ Borrelia hermsii DAH, DAH

+ Borrelia recurrentis A1, A1

+ Borrelia turicatae 91E135, 91E135

+ Leptospira biflexa serovar Patoc strain Patoc 1 (Ames), Patoc 1 (Ames)

+ Leptospira biflexa serovar Patoc strain Patoc 1 (Paris), Patoc 1 (Paris)

+ Leptospira borgpetersenii serovar Hardjo-bovis JB197, JB197

+ Leptospira borgpetersenii serovar Hardjo-bovis L550, L550

+ Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130

+ Leptospira interrogans serovar lai str. 56601

+ Treponema denticola ATCC 35405

+ Treponema pallidum

+ Treponema pallidum subsp. pallidum SS14, SS14

+ COG functional categories

+ (Clickable) linear whole genome views

+ Horizontal gene transfer (predicted by SIGI-HMM)

+ Sequence retrieval

+ Advanced search

+ Sequence similarity search

+ Best bidirectional hits (protein-based analysis)

+ Gene core sets (protein-based analysis)

+ Gene partnerships (DNA-based analysis)

+ Protein variations (protein-based analysis)

+ Synteny analysis (protein-based analysis)

+ Gene conservation (protein-based analysis)

+ Codon and amino acid usages (DNA- and protein-based analysis)

+ Alignments of whole reference and target genomic elements (DNA-based analysis)

Gene list

Applied filters:

COG category: Unclassified
Genomic element: PKO13310-1f08-a-g.r1

Number of genes found: 15

Free access


Show UniProt / TrEMBL protein name		View in Fasta format (DNA)		View in Fasta format (Protein)

Borrelia afzelii, PKo

Name	Locus tag	Product / Description	Genomic element	Type	Begin	Length	Strand	GC-content
NA	BAPKO_5022	hypothetical protein	PKO13310-1f08-a-g.r1	CDS	21369	513	-	0.233918
NA	BAPKO_5007	hypothetical protein	PKO13310-1f08-a-g.r1	CDS	5764	630	-	0.198413
NA	BAPKO_5009	hypothetical protein	PKO13310-1f08-a-g.r1	CDS	7695	939	+	0.211928
NA	BAPKO_5013	hypothetical protein	PKO13310-1f08-a-g.r1	CDS	10773	498	-	0.24498
NA	BAPKO_5008	hypothetical protein	PKO13310-1f08-a-g.r1	CDS	6535	1029	+	0.241011
NA	BAPKO_5021	hypothetical protein	PKO13310-1f08-a-g.r1	CDS	20891	504	-	0.210317
NA	BAPKO_5026	hypothetical protein	PKO13310-1f08-a-g.r1	CDS	24831	96	-	0.25
NA	BAPKO_5001	hypothetical protein	PKO13310-1f08-a-g.r1	CDS	311	447	-	0.243848
NA	BAPKO_5015	hypothetical protein	PKO13310-1f08-a-g.r1	CDS	13672	129	-	0.170543
NA	BAPKO_5025	hypothetical protein	PKO13310-1f08-a-g.r1	CDS	23286	1245	+	0.22249
NA	BAPKO_5010	hypothetical protein	PKO13310-1f08-a-g.r1	CDS	8633	519	+	0.196532
NA	BAPKO_5024	hypothetical protein	PKO13310-1f08-a-g.r1	CDS	22633	552	-	0.222826
NA	BAPKO_5012	hypothetical protein	PKO13310-1f08-a-g.r1	CDS	9954	570	+	0.198246
NA	BAPKO_5002	hypothetical protein	PKO13310-1f08-a-g.r1	CDS	843	1350	-	0.241481
ospC	BAPKO_5018	outer surface protein C	PKO13310-1f08-a-g.r1	CDS	16925	639	+	0.319249