SGB - The Spirochetes Genome Browser - Gene list

Title

+ Borrelia afzelii, PKo

+ Borrelia burgdorferi ZS7, ZS7

+ Borrelia burgdorferi, B31

+ Borrelia duttonii Ly, Ly

+ Borrelia garinii High passage (300), PBi

+ Borrelia garinii, PBi

+ Borrelia hermsii DAH, DAH

+ Borrelia recurrentis A1, A1

+ Borrelia turicatae 91E135, 91E135

+ Leptospira biflexa serovar Patoc strain Patoc 1 (Ames), Patoc 1 (Ames)

+ Leptospira biflexa serovar Patoc strain Patoc 1 (Paris), Patoc 1 (Paris)

+ Leptospira borgpetersenii serovar Hardjo-bovis JB197, JB197

+ Leptospira borgpetersenii serovar Hardjo-bovis L550, L550

+ Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130

+ Leptospira interrogans serovar lai str. 56601

+ Treponema denticola ATCC 35405

+ Treponema pallidum

+ Treponema pallidum subsp. pallidum SS14, SS14

+ COG functional categories

+ (Clickable) linear whole genome views

+ Horizontal gene transfer (predicted by SIGI-HMM)

+ Sequence retrieval

+ Advanced search

+ Sequence similarity search

+ Best bidirectional hits (protein-based analysis)

+ Gene core sets (protein-based analysis)

+ Gene partnerships (DNA-based analysis)

+ Protein variations (protein-based analysis)

+ Synteny analysis (protein-based analysis)

+ Gene conservation (protein-based analysis)

+ Codon and amino acid usages (DNA- and protein-based analysis)

+ Alignments of whole reference and target genomic elements (DNA-based analysis)

Gene list

Applied filters:

COG category: Unclassified
Genomic element: pl35

Number of genes found: 10

Free access


Show UniProt / TrEMBL protein name		View in Fasta format (DNA)		View in Fasta format (Protein)

Borrelia recurrentis A1, A1

Name	Locus tag	Product / Description	Genomic element	Type	Begin	Length	Strand	GC-content
NA	BRE_4016	uncharacterized conserved protein	pl35	CDS	15721	705	+	0.241135
NA	BRE_4024	MlpL-like protein	pl35	CDS	22583	432	-	0.243056
NA	BRE_4034	antigenic protein P35	pl35	CDS	33400	1248	+	0.306891
NA	BRE_4002	BBK32-like protein	pl35	CDS	1496	498	-	0.313253
NA	BRE_4008	ORFk-like protein	pl35	CDS	8903	696	+	0.268678
NA	BRE_4025	family 115-like protein	pl35	CDS	24060	540	+	0.283333
bdr_2	BRE_4027	bdr proitein	pl35	CDS	26002	474	+	0.261603
pf49	BRE_4019	PF49 plasmid partition protein	pl35	CDS	17796	576	+	0.234375
ppap1	BRE_4017	plasmid partitioning associated protein-1	pl35	CDS	16454	561	+	0.226381
vsp	BRE_4030	vsp protein	pl35	CDS	28035	705	+	0.351773