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2024-05-10 07:59:25

Gene list

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COG category: Energy production and conversion
Organism: Leptospira biflexa serovar Patoc strain Patoc 1 (Paris), Patoc 1 (Paris)

Number of genes found: 148

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Leptospira biflexa serovar Patoc strain Patoc 1 (Paris), Patoc 1 (Paris)
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
NA LEPBI_I1270 Hypothetical proteinchromosome I CDS1314979 1932 + 0.423913
NA LEPBI_II0063 Putative cytochrome oxidase subunit IIchromosome II CDS57711 696 - 0.431034
NA LEPBI_I0558 Putative biotin binding proteinchromosome I CDS557704 510 + 0.419608
NA LEPBI_I1612 Putative ferredoxinchromosome I CDS1687290 219 - 0.369863
NA LEPBI_I0383 Putative nitrous-oxide reductase precursor (N(2)OR; N2O reductase); putative signal peptidechromosome I CDS383085 1920 - 0.395312
NA LEPBI_I0282 Hypothetical protein; putative signal peptidechromosome I CDS273356 1185 - 0.382278
NA LEPBI_I2694 Putative cytochrome c; putative signal peptidechromosome I CDS2790977 405 - 0.437037
NA LEPBI_I3093 Hypothetical proteinchromosome I CDS3205672 417 + 0.395683
NA LEPBI_I0192 NADPH:quinone reductasechromosome I CDS186529 999 - 0.408408
NA LEPBI_I0387 Hypothetical protein; putative membrane proteinchromosome I CDS386707 411 - 0.355231
NA LEPBI_I3398 Conserved hypothetical proteinchromosome I CDS3520870 1002 - 0.328343
NA LEPBI_II0144 Putative soluble pyridine nucleotide transhydrogenase (NAD(P)(+) transhydrogenase [B-specific])chromosome II CDS139421 1443 - 0.428274
NA LEPBI_I0747 Putative glycerol-3-phosphate dehydrogenasechromosome I CDS763850 1608 + 0.394901
NA LEPBI_I0578 Putative FAD dehydrogenasechromosome I CDS579167 1413 - 0.410474
NA LEPBI_II0061 Putative cytochrome c oxidase, subunit IIIchromosome II CDS57021 531 - 0.440678
NA LEPBI_I2351 Putative dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex (E2; Dihydrolipoamide acetyltransferase component ochromosome I CDS2421253 249 - 0.385542
NA LEPBI_II0060 Putative iron-sulfur cluster-binding protein; putative transmembrane proteinchromosome II CDS55699 1320 - 0.404545
NA LEPBI_I0784 Aldehyde dehydrogenasechromosome I CDS802677 1605 - 0.429283
NA LEPBI_I0538 Putative FAD-linked oxidasechromosome I CDS534732 1446 - 0.361687
NA LEPBI_I3131 Hypothetical proteinchromosome I CDS3244368 387 - 0.374677
NA LEPBI_I2035 Putative oxidoreductasechromosome I CDS2116189 888 - 0.315315
NA LEPBI_I2716 Putative iron-sulfur cluster-binding proteinchromosome I CDS2810941 975 - 0.435897
NA LEPBI_I3105 Putative ferredoxin--NAD(+) reductasechromosome I CDS3221584 1086 - 0.375691
NA LEPBI_I3328 Putative reductase, NAD(P)-linked domainchromosome I CDS3437961 1017 + 0.397247
NA LEPBI_I2772 Oxidoreductase, molybdopterin-bindingchromosome I CDS2871244 2157 + 0.36764
NA LEPBI_I2907 Putative formyl-coenzyme A transferase (Formyl-CoA transferase)chromosome I CDS3002528 1149 - 0.411662
NA LEPBI_I3026 Conserved hypothetical protein; putative membrane protein; putative signal peptidechromosome I CDS3137250 1974 - 0.382472
NA LEPBI_I1034 Conserved hypothetical proteinchromosome I CDS1075550 795 + 0.446541
NA LEPBI_I0248 Hypothetical protein; putative signal peptidechromosome I CDS238380 474 - 0.398734
NA LEPBI_I0851 Putative acetyl-CoA hydrolase/transferasechromosome I CDS867961 1503 + 0.391218
NA LEPBI_I2656 Putative betaine aldehyde dehydrogenasechromosome I CDS2753025 1446 + 0.454357
NA LEPBI_I1639 Putative thioredoxin-related proteinchromosome I CDS1714399 534 + 0.406367
NA LEPBI_I3117 Putative alcohol dehydrogenase, zinc-containing alcohol dehydrogenase familychromosome I CDS3230688 1248 - 0.447115
NA LEPBI_I3192 Putative cytochrome c with heme-binding site; putative signal peptidechromosome I CDS3303712 876 + 0.429224
NA LEPBI_II0064 Putative cytochrome c oxidase, subunit I (Heme B/copper cytochrome c oxidase subunit); putative membrane proteinchromosome II CDS58406 1431 - 0.417191
NA LEPBI_I2489 Putative enzymechromosome I CDS2573054 1005 + 0.391045
NA LEPBI_I1369 Putative molybdopterin oxidoreductase, iron-sulfur binding subunitchromosome I CDS1425801 3129 + 0.441035
NA LEPBI_I1071 Putative NAD(FAD)-dependent dehydrogenasechromosome I CDS1113185 1188 - 0.363636
NA LEPBI_I2475 Putative alcohol dehydrogenase, zinc-containingchromosome I CDS2558230 1005 + 0.378109
NA LEPBI_I1161 Conserved hypothetical protein; putative signal peptidechromosome I CDS1208318 717 + 0.429568
NA LEPBI_I3346 Putative NADPH dehydrogenasechromosome I CDS3452739 1077 - 0.386258
NA LEPBI_I0931 Conserved hypothetical proteinchromosome I CDS964003 948 + 0.385021
NA LEPBI_I0332 Hypothetical protein; putative signal peptidechromosome I CDS333830 1041 - 0.370797
NA LEPBI_I3293 Putative zinc-binding alcohol dehydrogenasechromosome I CDS3405194 1041 + 0.425552
NA LEPBI_I1254 Conserved hypothetical protein with HEAT-like repeat; putative signal peptidechromosome I CDS1298904 1563 + 0.414587
NA LEPBI_I0227 Putative bifunctional enzyme: Glycerol-3-phosphate dehydrogenase [NAD(P)+] (NAD(P)H- dependent glycerol-3-phosphate dehydrogenase)/ Glycerol-3-phosphachromosome I CDS217954 2421 - 0.389508
NA LEPBI_I1544 Putative zinc-containing alcohol dehydrogenase superfamilychromosome I CDS1609476 1002 - 0.397206
NA LEPBI_I2943 Aldehyde dehydrogenasechromosome I CDS3042397 1476 - 0.394986
NA LEPBI_I2840 Conserved hypothetical proteinchromosome I CDS2931176 1155 - 0.350649
NA LEPBI_I0938 Putative protein-disulfide reductase; putative signal peptdiechromosome I CDS970934 822 - 0.336983
NA LEPBI_I1326 Putative alcohol dehydrogenasechromosome I CDS1381304 1167 - 0.409597
NA LEPBI_I0958 Putative ferredoxin-like proteinchromosome I CDS990649 672 - 0.392857
NA LEPBI_I0384 Hypothetical proteinchromosome I CDS385013 462 - 0.398268
NA LEPBI_I2861 Conserved hypothetical proteinchromosome I CDS2952543 684 - 0.402047
NA LEPBI_II0212 Alcohol dehydrogenase (Zinc-containing alcohol dehydrogenase family)chromosome II CDS213603 1038 + 0.475915
NA LEPBI_I1157 Putative thiol-disulfide isomerase and thioredoxinchromosome I CDS1205294 513 + 0.413255
NA LEPBI_I3187 Putative Zinc-dependent dehydrogenasechromosome I CDS3297602 1020 - 0.385294
NA LEPBI_I1341 Putative oxidase or carboxylasechromosome I CDS1394971 2253 + 0.447403
NA LEPBI_I3191 Putative ferredoxin-like protein, 2 Fe-2Schromosome I CDS3303167 327 + 0.397554
NA LEPBI_I2804 Putative oxidoreductasechromosome I CDS2899749 2253 + 0.386152
NA LEPBI_I0897 Putative oxidoreductasechromosome I CDS918887 1185 + 0.374684
NA LEPBI_I1802 Putative CoB--CoM heterodisulfide reductase; putative membrane proteinchromosome I CDS1879912 2103 + 0.431289
NA LEPBI_I3115 Putative NADPH:quinone reductasechromosome I CDS3228895 1014 - 0.443787
NA LEPBI_I3356 Putative nitroreductasechromosome I CDS3467218 696 + 0.416667
NA LEPBI_I2875 Putative NADH oxidoreductasechromosome I CDS2967517 1203 - 0.428096
acnA LEPBI_II0249 Aconitate hydratasechromosome II CDS237816 2256 - 0.455231
acoA LEPBI_I1559 Pyruvate dehydrogenase E1 alpha subunitchromosome I CDS1626525 969 - 0.470588
acoB LEPBI_I1558 Pyruvate dehydrogenase E1 beta subunitchromosome I CDS1625550 975 - 0.455385
acoC LEPBI_I1557 Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complexchromosome I CDS1624148 1395 - 0.450896
acyP LEPBI_I3327 Acylphosphatase (Acylphosphate phosphohydrolase)chromosome I CDS3437672 288 + 0.385417
atpA LEPBI_I0805 ATP synthase F1, alpha subunitchromosome I CDS818914 1515 + 0.434323
atpB LEPBI_I0801 ATP synthase F0, A subunit; putative membrane protein; putative signal peptidechromosome I CDS816568 930 + 0.439785
atpC LEPBI_I0808 ATP synthase F1, epsilon subunitchromosome I CDS822743 381 + 0.446194
atpD LEPBI_I0807 ATP synthase F1, beta subunitchromosome I CDS821331 1407 + 0.429282
atpE LEPBI_I0802 ATP synthase F0, C subunit (Lipid-binding protein)chromosome I CDS817546 285 + 0.466667
atpF LEPBI_I0803 ATP synthase F0, B subunitchromosome I CDS817833 525 + 0.424762
atpG LEPBI_I0806 ATP synthase F1, gamma subunitchromosome I CDS820440 870 + 0.432184
atpH LEPBI_I0804 ATP synthase F1, delta subunitchromosome I CDS818354 564 + 0.406028
ctaC LEPBI_I2684 Cytochrome c oxidase polypeptide II (Cytochrome aa3 subunit 2; Oxidase aa(3) subunit 2)chromosome I CDS2781304 963 - 0.425753
ctaD LEPBI_I2683 Cytochrome c oxidase polypeptide I (Cytochrome aa3 subunit 1; Oxidase aa(3) subunit 1); putative membrane proteinchromosome I CDS2779681 1614 - 0.452912
ctaE LEPBI_I2682 Cytochrome c oxidase polypeptide III (Cytochrome aa3 subunit 3; Oxidase aa(3) subunit 3)chromosome I CDS2778921 774 - 0.432817
dsbD LEPBI_I3297 Thiol:disulfide interchange protein DsbD (precursor)chromosome I CDS3409651 1311 - 0.376812
eapA LEPBI_II0038 Putative alkyldihydroxyacetonephosphate synthasechromosome II CDS36088 1632 + 0.382966
etfA LEPBI_I1132 Electron transfer flavoprotein alpha-subunit (Alpha-ETF; Electron transfer flavoprotein large subunit) (ETFLS)chromosome I CDS1180091 960 - 0.441667
etfB LEPBI_I1133 Electron transfer flavoprotein beta-subunit (Beta-ETF; Electron transfer flavoprotein small subunit) (ETFSS)chromosome I CDS1181061 762 - 0.448819
fadH LEPBI_I2481 2,4-dienoyl-CoA reductase (NADPH)chromosome I CDS2562902 1995 - 0.403008
fadH2 LEPBI_I2046 2,4-dienoyl coenzyme A reductase (NADPH)chromosome I CDS2127024 2019 - 0.443289
fdxA LEPBI_II0184 Ferredoxinchromosome II CDS183778 300 - 0.4
fumA LEPBI_I3137 Fumarate hydratase class I, aerobic (Fumarase)chromosome I CDS3248967 1614 - 0.437423
fumC LEPBI_I3130 Fumarate hydratase class II (Fumarase C)chromosome I CDS3242939 1389 + 0.415407
gabD LEPBI_I2654 Succinate-semialdehyde dehydrogenase [NADP+] (SSDH)chromosome I CDS2750274 1458 + 0.460905
glpD LEPBI_II0041 Glycerol-3-phosphate oxidasechromosome II CDS39291 1641 + 0.387569
glpD LEPBI_I1569 Aerobic glycerol-3-phosphate dehydrogenasechromosome I CDS1636932 1608 - 0.427861
glpK LEPBI_I1323 Glycerol kinasechromosome I CDS1378369 1497 + 0.41817
glpQ LEPBI_I3421 Putative glycerophosphodiester phosphodiesterase; putative signal peptidechromosome I CDS3540713 960 - 0.357292
gltA LEPBI_I1043 Citrate synthasechromosome I CDS1084118 1290 - 0.403876
gltA2 LEPBI_I2691 Citrate synthase 1chromosome I CDS2788975 1281 - 0.395004
gltP LEPBI_I3441 Putative proton glutamate symport protein; putative membrane proteinchromosome I CDS3562264 1263 + 0.369755
gpsA1 LEPBI_I1936 Glycerol-3-phosphate dehydrogenase [NAD(P)+] (NAD(P)H-dependent glycerol-3-phosphate dehydrogenase)chromosome I CDS2023651 2019 + 0.414562
gpsA2 LEPBI_I0345 Glycerol-3-phosphate dehydrogenase [NAD(P)+] (NAD(P)H-dependent glycerol-3-phosphate dehydrogenase)chromosome I CDS344782 1002 - 0.45509
hycC LEPBI_I2423 Hydrogenase-4 subunit C; putative membrane proteinchromosome I CDS2495362 1737 - 0.328152
hycD LEPBI_I2422 Hydrogenase-4 subunit Dchromosome I CDS2494475 879 - 0.354949
hycE LEPBI_I2419 Hydrogenase-4 subunit Echromosome I CDS2491225 1428 - 0.364846
hycG LEPBI_I2417 Hydrogenase-4 subunit Gchromosome I CDS2490407 822 - 0.414842
hyfF LEPBI_I2420 Hydrogenase-4 subunit Fchromosome I CDS2492649 1209 - 0.325889
icd LEPBI_I2891 Isocitrate dehydrogenase (NADP)chromosome I CDS2981989 1212 - 0.385314
lpdA1 LEPBI_I1057 Dihydrolipoyl dehydrogenasechromosome I CDS1098379 1407 - 0.477612
lpdA2 LEPBI_I1903 Dihydrolipoyl dehydrogenase (E3 component of pyruvate and 2-oxoglutarate dehydrogenases complexes; Dihydrolipoamide dehydrogenase)chromosome I CDS1995133 1386 + 0.429293
lpdA3 LEPBI_I2919 Dihydrolipoyl dehydrogenase (E3 component of alpha keto acid dehydrogenase complexes; Dihydrolipoamide dehydrogenase)chromosome I CDS3016423 1428 - 0.440476
maeB LEPBI_I0143 NADP-dependent malic enzymechromosome I CDS139288 1302 + 0.437788
mdh LEPBI_I1144 Malate dehydrogenasechromosome I CDS1192329 984 + 0.439024
narB LEPBI_I2764 Nitrate reductasechromosome I CDS2859845 3519 - 0.394714
ndh LEPBI_II0021 NADH dehydrogenasechromosome II CDS22817 1272 - 0.366352
nhaC LEPBI_I0903 Na(+)/H(+) antiporter (Sodium/proton antiporter; Sodium/hydrogen antiporter); putative membrane proteinchromosome I CDS926104 1374 + 0.377001
nirB LEPBI_I2766 Nitrite reductase [NAD(P)H], large subunit, nucleotide- and Fe/S-cluster bindingchromosome I CDS2863781 2520 + 0.384127
norC LEPBI_I2955 Nitric oxide reductase, cytochrome c-containing subunitchromosome I CDS3060231 705 - 0.425532
norE LEPBI_I2958 Nitric oxide reductase subunit Echromosome I CDS3061275 573 + 0.359511
nuoA LEPBI_I1296 NADH-quinone oxidoreductase, chain Achromosome I CDS1351303 396 + 0.39899
nuoB LEPBI_I1297 NADH-quinone oxidoreductase chain Bchromosome I CDS1351689 561 + 0.458111
nuoC LEPBI_I1298 NADH-quinone oxidoreductase, chain Cchromosome I CDS1352246 522 + 0.43295
nuoD LEPBI_I1299 NADH-quinone oxidoreductase, chain Dchromosome I CDS1352784 1221 + 0.432432
nuoE LEPBI_I1300 NADH-quinone oxidoreductase, chain Echromosome I CDS1353998 495 + 0.412121
nuoF LEPBI_I1301 NADH-quinone oxidoreductase, chain Fchromosome I CDS1354494 1272 + 0.438679
nuoG LEPBI_I3406 NADH-quinone oxidoreductase chain Gchromosome I CDS3525979 1449 - 0.409248
nuoH LEPBI_I1302 NADH-quinone oxidoreductase, chain Hchromosome I CDS1355781 1071 + 0.439776
nuoI LEPBI_I3405 NADH-quinone oxidoreductase chain Ichromosome I CDS3525465 528 - 0.416667
nuoJ LEPBI_I1303 NADH-quinone oxidoreductase, chain Jchromosome I CDS1356848 600 + 0.408333
nuoK LEPBI_I1304 NADH-quinone oxidoreductase, chain Kchromosome I CDS1357444 321 + 0.429907
nuoL LEPBI_I1305 NADH-quinone oxidoreductase, chain Lchromosome I CDS1357769 1929 + 0.397615
nuoM LEPBI_I1306 NADH-quinone oxidoreductase, chain Mchromosome I CDS1359699 1740 + 0.398276
nuoN LEPBI_I1307 NADH-quinone oxidoreductase, chain Nchromosome I CDS1361442 1443 + 0.413721
pck LEPBI_I2989 Phosphoenolpyruvate carboxykinase [ATP] (PEP carboxykinase; Phosphoenolpyruvate carboxylase)(PEPCK)chromosome I CDS3094825 1593 - 0.43189
pntA LEPBI_I3233 NAD(P) transhydrogenase subunit alpha part 1chromosome I CDS3346024 1128 + 0.400709
pntAB LEPBI_I0180 NAD(P) transhydrogenase subunit alpha part 2; putative membrane proteinchromosome I CDS175139 291 + 0.43299
pntB LEPBI_I0181 NAD(P) transhydrogenase subunit beta; putative membrane proteinchromosome I CDS175429 1398 + 0.422747
ppa LEPBI_I1313 Inorganic pyrophosphatase (Pyrophosphate phospho-hydrolase; PPase)chromosome I CDS1369755 624 + 0.399038
ppc LEPBI_I2497 Phosphoenolpyruvate carboxylasechromosome I CDS2583402 2016 + 0.349702
ppc LEPBI_I2499 Phosphoenolpyruvate carboxylase (PEPCase; PEPC)chromosome I CDS2585568 216 + 0.324074
sdhA1 LEPBI_I1698 Succinate dehydrogenase flavoprotein subunit SdhA (Fumarate reductase)chromosome I CDS1770059 1926 + 0.454829
sdhA2 LEPBI_I3136 Succinate dehydrogenase flavoprotein subunit SdhA (Fumarate reductase)chromosome I CDS3246980 1959 - 0.383869
sdhB LEPBI_I1699 Succinate dehydrogenase iron-sulfur subunit SdhBchromosome I CDS1771984 741 + 0.442645
sucA LEPBI_I1056 2-oxoglutarate dehydrogenase E1 component (Alpha-ketoglutarate dehydrogenase)chromosome I CDS1095576 2769 - 0.427952
sucB LEPBI_I1058 Dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complexchromosome I CDS1099793 1233 - 0.476886
sucC LEPBI_I2056 Succinyl-CoA synthetase beta chain (SCS-beta)chromosome I CDS2144575 1212 + 0.450495
sucD LEPBI_I2057 Succinyl-CoA synthetase alpha chain (SCS-alpha)chromosome I CDS2145799 891 + 0.470258
trxA1 LEPBI_I3174 Thioredoxin 1 (TRX-1)chromosome I CDS3287096 315 - 0.403175
trxA2 LEPBI_I2300 Thioredoxin (TRX)chromosome I CDS2367797 312 + 0.394231
ugpQ LEPBI_I1842 Glycerophosphoryl diester phosphodiesterase (Glycerophosphodiester phosphodiesterase)chromosome I CDS1934077 765 + 0.435294