SGB - The Spirochetes Genome Browser - Gene list

Title

+ Borrelia afzelii, PKo

+ Borrelia burgdorferi ZS7, ZS7

+ Borrelia burgdorferi, B31

+ Borrelia duttonii Ly, Ly

+ Borrelia garinii High passage (300), PBi

+ Borrelia garinii, PBi

+ Borrelia hermsii DAH, DAH

+ Borrelia recurrentis A1, A1

+ Borrelia turicatae 91E135, 91E135

+ Leptospira biflexa serovar Patoc strain Patoc 1 (Ames), Patoc 1 (Ames)

+ Leptospira biflexa serovar Patoc strain Patoc 1 (Paris), Patoc 1 (Paris)

+ Leptospira borgpetersenii serovar Hardjo-bovis JB197, JB197

+ Leptospira borgpetersenii serovar Hardjo-bovis L550, L550

+ Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130

+ Leptospira interrogans serovar lai str. 56601

+ Treponema denticola ATCC 35405

+ Treponema pallidum

+ Treponema pallidum subsp. pallidum SS14, SS14

+ COG functional categories

+ (Clickable) linear whole genome views

+ Horizontal gene transfer (predicted by SIGI-HMM)

+ Sequence retrieval

+ Advanced search

+ Sequence similarity search

+ Best bidirectional hits (protein-based analysis)

+ Gene core sets (protein-based analysis)

+ Gene partnerships (DNA-based analysis)

+ Protein variations (protein-based analysis)

+ Synteny analysis (protein-based analysis)

+ Gene conservation (protein-based analysis)

+ Codon and amino acid usages (DNA- and protein-based analysis)

+ Alignments of whole reference and target genomic elements (DNA-based analysis)

Gene list

Applied filters:

COG category: Cell cycle control, mitosis and meiosis
Genomic element: PKO-g-P-chrIn1v1.w1

Number of genes found: 19

Free access


Show UniProt / TrEMBL protein name		View in Fasta format (DNA)		View in Fasta format (Protein)

Borrelia afzelii, PKo

Name	Locus tag	Product / Description	Genomic element	Type	Begin	Length	Strand	GC-content
NA	BAPKO_0219	hypothetical protein	PKO-g-P-chrIn1v1.w1	CDS	216368	1035	+	0.191304
NA	BAPKO_0539	hypothetical protein	PKO-g-P-chrIn1v1.w1	CDS	520233	6489	+	0.25628
NA	BAPKO_0045	P115 protein	PKO-g-P-chrIn1v1.w1	CDS	42684	2451	-	0.257038
NA	BAPKO_0453	chromosome segregation protein, putative	PKO-g-P-chrIn1v1.w1	CDS	453278	753	+	0.258964
NA	BAPKO_0078	hypothetical protein	PKO-g-P-chrIn1v1.w1	CDS	73213	1029	+	0.234208
NA	BAPKO_0582	hypothetical protein	PKO-g-P-chrIn1v1.w1	CDS	567979	1506	-	0.237716
NA	BAPKO_0313	hypothetical protein	PKO-g-P-chrIn1v1.w1	CDS	310062	429	-	0.263403
NA	BAPKO_0267	cell division protein, putative	PKO-g-P-chrIn1v1.w1	CDS	266218	2352	-	0.28869
NA	BAPKO_0840	hypothetical protein	PKO-g-P-chrIn1v1.w1	CDS	827887	1323	+	0.24263
NA	BAPKO_0787	antigen, p83/100	PKO-g-P-chrIn1v1.w1	CDS	790613	1992	+	0.298193
ftsA	BAPKO_0310	cell division protein	PKO-g-P-chrIn1v1.w1	CDS	307412	1242	-	0.353462
ftsW	BAPKO_0312	cell division protein	PKO-g-P-chrIn1v1.w1	CDS	309432	558	-	0.310036
ftsZ	BAPKO_0309	cell division protein	PKO-g-P-chrIn1v1.w1	CDS	306191	1200	-	0.374167
gidA	BAPKO_0180	glucose inhibited division protein A	PKO-g-P-chrIn1v1.w1	CDS	178998	1866	-	0.339228
mreB-1	BAPKO_0759	rod shape-determining protein	PKO-g-P-chrIn1v1.w1	CDS	755942	1086	+	0.349908
mreB-2	BAPKO_0763	rod shape-determining protein	PKO-g-P-chrIn1v1.w1	CDS	760162	1317	+	0.264237
ylxH-1	BAPKO_0279	minD-related ATP-binding protein	PKO-g-P-chrIn1v1.w1	CDS	280688	888	-	0.310811
ylxH-2	BAPKO_0368	minD-related ATP-binding protein	PKO-g-P-chrIn1v1.w1	CDS	367702	1143	+	0.27909
ylxH-3	BAPKO_0770	minD-related ATP-binding protein	PKO-g-P-chrIn1v1.w1	CDS	768178	972	+	0.288066