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2024-05-12 13:57:43

Gene list

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COG category: Amino acid transport and metabolism
Organism: Leptospira biflexa serovar Patoc strain Patoc 1 (Ames), Patoc 1 (Ames)

Number of genes found: 184

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Show UniProt / TrEMBL protein name View in Fasta format (DNA) View in Fasta format (Protein)  

 
Leptospira biflexa serovar Patoc strain Patoc 1 (Ames), Patoc 1 (Ames)
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
NA LBF_0994 Aspartate/tyrosine/aromatic aminotransferasechromosome I CDS1074969 1227 + 0.449063
NA LBF_3175 Zn-dependent alcohol dehydrogenasechromosome I CDS3409945 1443 - 0.406791
NA LBF_0219 Drug/metabolite transporter (DMT) family permeasechromosome I CDS220544 897 + 0.365663
NA LBF_0317 Permease component of an ABC transporter complexchromosome I CDS331550 1011 + 0.367953
NA LBF_4258 Conserved hypothetical proteinchromosome II CDS264107 309 + 0.385113
NA LBF_0800 Lipase/phospolipasechromosome I CDS849677 768 + 0.393229
NA LBF_0111 Conserved hypothetical proteinchromosome I CDS117757 1200 - 0.404167
NA LBF_0817 Substrate binding protein of an ABC transporter complexchromosome I CDS869765 1425 - 0.360702
NA LBF_0862 Lactoylglutathione-related lyasechromosome I CDS921699 483 - 0.407867
NA LBF_0044 Acetyltransferasechromosome I CDS46280 450 - 0.324444
NA LBF_2292 Thiamine pyrophosphate-requiring enzymechromosome I CDS2436985 1707 - 0.446983
NA LBF_2824 Hypothetical proteinchromosome I CDS3028786 1038 + 0.434489
NA LBF_2571 ATP-binding protein of an ABC transporter complexchromosome I CDS2756292 1026 - 0.420078
NA LBF_4182 Permeasechromosome II CDS190284 921 - 0.390879
NA LBF_0879 Aspartate/tyrosine/aromatic aminotransferasechromosome I CDS948283 1302 + 0.378648
NA LBF_1675 Sodium/proline symporterchromosome I CDS1805867 1731 - 0.378394
NA LBF_3007 Lactoylglutathione-like lyasechromosome I CDS3238453 432 - 0.377315
NA LBF_2570 Permease component of an ABC transporter complexchromosome I CDS2755364 918 - 0.405229
NA LBF_0721 Sugar phosphate permeasechromosome I CDS765511 1206 - 0.41791
NA LBF_2248 Aspartate/tyrosine/aromatic aminotransferasechromosome I CDS2388730 1089 - 0.449954
NA LBF_1438 Conserved hypothetical proteinchromosome I CDS1559716 462 + 0.400433
NA LBF_2878 Permeasechromosome I CDS3092868 1305 - 0.390805
NA LBF_0932 Lipase/Acylhydrolasechromosome I CDS1007622 663 + 0.410256
NA LBF_0793 Permeasechromosome I CDS842175 915 + 0.382514
NA LBF_3350 Substrate binding protein of an ABC transporter complexchromosome I CDS3592029 855 - 0.357895
NA LBF_2463 Aspartate/tyrosine/aromatic aminotransferasechromosome I CDS2637859 1218 - 0.429392
NA LBF_3258 Conserved hypothetical proteinchromosome I CDS3497148 3258 - 0.380602
NA LBF_1336 Conserved hypothetical proteinchromosome I CDS1451522 1188 + 0.414983
NA LBF_1844 Dehydrogenasechromosome I CDS1997164 1224 + 0.402778
NA LBF_0766 Thiamine pyrophosphate-requiring enzymechromosome I CDS816780 1722 + 0.394309
NA LBF_1374 Conserved hypothetical proteinchromosome I CDS1496133 1752 + 0.416096
NA LBF_1572 ATP-binding protein of an ABC transporter complexchromosome I CDS1700687 762 + 0.410761
NA LBF_2545 Lipase/phospolipasechromosome I CDS2726549 834 + 0.368106
NA LBF_4097 Permeasechromosome II CDS97293 942 + 0.446921
NA LBF_3256 Cysteine proteasechromosome I CDS3493739 882 - 0.346939
NA LBF_4065 NADPH-dependent glutamate synthase beta chain - related oxidoreductasechromosome II CDS61178 1443 - 0.458073
NA LBF_2283 Para-aminobenzoate synthasechromosome I CDS2427749 1866 + 0.384244
NA LBF_2811 Cation transporter proteinchromosome I CDS3018482 390 - 0.397436
NA LBF_0906 Phosphoribosyl-ATP diphosphatasechromosome I CDS977558 279 + 0.34767
NA LBF_3138 Dioxygenase superfamily proteinchromosome I CDS3374494 351 - 0.401709
NA LBF_2574 Aminotransferasechromosome I CDS2760114 1290 + 0.455814
NA LBF_1402 Transcriptional regulator, MocR familychromosome I CDS1522648 1194 + 0.404523
NA LBF_1831 Amino acid transporterchromosome I CDS1985784 1452 + 0.407025
NA LBF_1401 Transcriptional regulator, MocR-familychromosome I CDS1521178 1404 - 0.361823
NA LBF_0738 Lactoylglutathione-related lyasechromosome I CDS784290 423 + 0.401891
NA LBF_0790 Permeasechromosome I CDS839397 888 - 0.367117
NA LBF_0947 Zn-dependent oligopeptidasechromosome I CDS1019455 1947 - 0.386749
NA LBF_2238 Permease of the major facilitator superfamilychromosome I CDS2382994 1281 - 0.384856
NA LBF_0646 Permeasechromosome I CDS677380 1254 - 0.383573
NA LBF_1877 2-isopropylmalate synthasechromosome I CDS2024597 900 + 0.396667
NA LBF_2296 permease of the major facilitator superfamilychromosome I CDS2441674 1179 - 0.373198
NA LBF_0320 ATP-binding protein of an ABC transporter complexchromosome I CDS334585 957 + 0.380355
NA LBF_2569 Permease component of an ABC transporter complexchromosome I CDS2754571 804 - 0.432836
NA LBF_1355 Aspartate/tyrosine/aromatic aminotransferasechromosome I CDS1473143 1143 - 0.422572
NA LBF_1952 Dehydrogenasechromosome I CDS2091983 987 - 0.371834
NA LBF_4090 Protein kinasechromosome II CDS89749 1116 - 0.458781
NA LBF_0435 Amino acid permeasechromosome I CDS455429 1377 - 0.406681
NA LBF_2859 Transporter transmembrane proteinchromosome I CDS3071260 1359 - 0.390728
NA LBF_4042 Protein kinasechromosome II CDS41351 999 - 0.397397
NA LBF_2738 Permease component of an ABC transporter complexchromosome I CDS2936507 771 - 0.373541
NA LBF_0294 Permeasechromosome I CDS302719 1227 - 0.414833
NA LBF_2107 conserved hypothetical proteinchromosome I CDS2259209 393 + 0.305344
NA LBF_0583 Thiamine pyrophosphate-requiring enzymechromosome I CDS612376 1764 - 0.395125
NA LBF_3226 Zn-dependent carboxypeptidasechromosome I CDS3455264 1545 - 0.371521
NA LBF_0236 Sodium/proline symporterchromosome I CDS236453 1593 + 0.405524
NA LBF_2018 Permease of the major facilitator superfamilychromosome I CDS2166054 1242 + 0.411433
NA LBF_2572 Periplasmic protein of an ABC transporter complexchromosome I CDS2757352 1170 - 0.410256
NA LBF_2052 Cysteine sulfinate desulfinase or Cysteine desulfhydrasechromosome I CDS2206002 1131 + 0.366048
NA LBF_0318 Permease component of an ABC transporter complexchromosome I CDS332557 1050 + 0.373333
NA LBF_2948 Zn-dependent alcohol dehydrogenasechromosome I CDS3174186 1023 + 0.443793
NA LBF_0319 ATP-binding protein of an ABC transporter complexchromosome I CDS333603 990 + 0.371717
NA LBF_2776 Hypothetical proteinchromosome I CDS2978263 588 - 0.423469
NA LBF_2543 Lactoylglutathione lyase-related proteinchromosome I CDS2725088 396 + 0.338384
NA LBF_1807 Sodium-solute symporterchromosome I CDS1957593 1311 + 0.409611
NA LBF_2671 Conserved hypothetical proteinchromosome I CDS2857083 1335 + 0.362547
NA LBF_3143 Aspartate/tyrosine/aromatic aminotransferasechromosome I CDS3378498 1194 + 0.350921
NA LBF_1815 Dipeptide/tripeptide permeasechromosome I CDS1966653 1332 - 0.414414
NA LBF_4185 Hypothetical proteinchromosome II CDS191908 357 + 0.40056
NA LBF_2256 Substrate binding protein of an ABC transporter complexchromosome I CDS2397729 1821 - 0.371225
NA LBF_1546 Hypothetical proteinchromosome I CDS1679161 834 - 0.351319
NA LBF_0908 Multi function protein, one conserved hypothetical the other a deaminating Glycine/D-amino acid oxidasechromosome I CDS978924 1197 - 0.390142
NA LBF_2739 Permease component of an ABC transporter complexchromosome I CDS2937267 891 - 0.344557
NA LBF_2876 Glutamate synthase domain 2 proteinchromosome I CDS3089237 1554 + 0.42278
NA LBF_1068 Sodium/solute symporterchromosome I CDS1161030 1434 - 0.377964
aofA LBF_1077 Amine oxidase (flavin-containing)chromosome I CDS1170168 1377 - 0.403776
argB LBF_4165 Acetylglutamate kinasechromosome II CDS166847 879 + 0.440273
argC LBF_1430 N-acetyl-gamma-glutamyl-phosphate reductasechromosome I CDS1546675 1023 - 0.410557
argD LBF_2250 Acetylornithine aminotransferasechromosome I CDS2391616 1218 + 0.401478
argE LBF_3244 Metallopeptidasechromosome I CDS3477028 1443 + 0.397782
argF LBF_2362 Ornithine carbamoyltransferasechromosome I CDS2512573 933 + 0.386924
argG LBF_0087 Argininosuccinate synthasechromosome I CDS90912 1209 - 0.417701
argH LBF_1555 Argininosuccinate lyasechromosome I CDS1686054 1437 + 0.402227
aroA LBF_2518 3-phosphoshikimate 1-carboxyvinyltransferasechromosome I CDS2693683 1287 - 0.428904
aroB LBF_2502 3-dehydroquinate synthasechromosome I CDS2676643 1101 - 0.393279
aroB-1 LBF_2396 3-dehydroquinate synthasechromosome I CDS2558296 1164 - 0.35567
aroC LBF_3292 Chorismate synthasechromosome I CDS3536586 1137 - 0.443272
aroD LBF_3296 3-dehydroquinate dehydratasechromosome I CDS3539783 717 + 0.35007
aroE LBF_0806 Shikimate 5-dehydrogenasechromosome I CDS856419 891 - 0.411897
aroG LBF_0263 3-deoxy-7-phosphoheptulonate synthasechromosome I CDS271018 1050 - 0.419048
aroK LBF_4071 Shikimate kinasechromosome II CDS70769 546 - 0.399267
asd LBF_4262 Aspartate-semialdehyde dehydrogenasechromosome II CDS269301 1050 - 0.435238
aspA LBF_4047 Aspartate ammonia-lyasechromosome II CDS47069 1407 - 0.428571
avtA LBF_0672 Valine--pyruvate transaminasechromosome I CDS710894 1275 - 0.436863
carA LBF_0786 Carbamoyl-phosphate synthase (glutamine- hydrolyzing), small subunitchromosome I CDS836252 1086 - 0.42081
carB LBF_1227 Carbamoyl-phosphate synthase (glutamine- hydrolyzing), large subunitchromosome I CDS1338509 3312 + 0.417271
csdB LBF_1862 Selenocysteine lyasechromosome I CDS2011634 1245 - 0.406426
csdB LBF_4161 Selenocysteine lyasechromosome II CDS162724 1203 - 0.41064
cysE LBF_0035 Serine O-acetyltransferasechromosome I CDS37313 717 - 0.425384
cysH-1 LBF_1141 Phosphoadenylyl-sulfate reductase (thioredoxin)chromosome I CDS1237864 726 - 0.446281
cysH-2 LBF_1140 Phosphoadenylyl-sulfate reductase (thioredoxin)chromosome I CDS1236949 909 - 0.407041
cysK-1 LBF_2980 Cysteine synthasechromosome I CDS3205820 975 + 0.43282
cysK-2 LBF_1121 Cysteine synthasechromosome I CDS1214489 915 + 0.416393
cysK-3 LBF_1578 Cysteine synthasechromosome I CDS1706206 1002 + 0.423154
dapA LBF_0710 Dihydrodipicolinate synthase/N-acetylneuraminate lyasechromosome I CDS753523 885 + 0.437288
dapB LBF_0711 Dihydrodipicolinate reductasechromosome I CDS754400 804 + 0.414179
dapF LBF_0565 Diaminopimelate epimerasechromosome I CDS593311 843 + 0.442467
gcvH LBF_3077 Glycine dehydrogenase (decarboxylating), protein Hchromosome I CDS3308204 393 + 0.412214
gcvP LBF_3078 Glycine dehydrogenase (decarboxylating), protein Pchromosome I CDS3308607 2922 + 0.421971
gcvT LBF_3076 Aminomethyltransferasechromosome I CDS3307076 1113 + 0.415993
ggt LBF_1859 Gamma-glutamyltransferasechromosome I CDS2009136 1773 - 0.425268
ggt-1 LBF_3068 Gamma-glutamyltransferasechromosome I CDS3298701 1722 - 0.409408
glnA LBF_1365 Glutamate--ammonia ligasechromosome I CDS1485787 1461 - 0.403149
glnK LBF_2338 Nitrogen regulatory protein PIIchromosome I CDS2485981 345 - 0.350725
glnK-1 LBF_0767 Nitrogen regulatory protein PIIchromosome I CDS818554 348 - 0.393678
gltB LBF_4066 Glutamate synthase (NADH)chromosome II CDS62613 4578 - 0.450633
glyA LBF_0974 Glycine hydroxymethyltransferasechromosome I CDS1056856 1251 - 0.431655
hisA LBF_0843 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4- carboxamide isomerasechromosome I CDS900068 744 + 0.395161
hisB LBF_0841 Imidazoleglycerol-phosphate dehydratase or histidinol-phosphatasechromosome I CDS898852 594 + 0.442761
hisC LBF_1793 Bifunctional histidinol-phosphate/aromatic aminotransferase/cobyric acid decarboxylasechromosome I CDS1943519 1095 + 0.411872
hisD LBF_1772 Histidinol dehydrogenasechromosome I CDS1915994 1293 - 0.435421
hisF-1 LBF_1676 Imidazoleglycerol-phosphate synthasechromosome I CDS1807594 768 - 0.414062
hisG LBF_2513 ATP phosphoribosyltransferasechromosome I CDS2688149 615 - 0.439024
hisH-1 LBF_0842 Glutamine amidotransferasechromosome I CDS899442 627 + 0.38118
hisI LBF_3191 Phosphoribosyl-AMP cyclohydrolasechromosome I CDS3425908 609 - 0.369458
hutH LBF_0707 Histidine ammonia-lyasechromosome I CDS749845 1545 + 0.399353
ilvA LBF_1539 Threonine ammonia-lyasechromosome I CDS1671502 1278 + 0.389671
ilvC LBF_0685 Ketol-acid reductoisomerasechromosome I CDS724190 1002 - 0.44511
ilvD LBF_3238 Dihydroxy-acid dehydratasechromosome I CDS3469797 1677 - 0.42099
ilvE LBF_0002 Branched-chain amino acid aminotransferasechromosome I CDS2045 924 + 0.410173
ilvH LBF_2291 Acetolactate synthase, small subunitchromosome I CDS2436500 489 - 0.423313
kamA LBF_4195 Lysine 2,3-aminomutasechromosome II CDS204090 1065 + 0.433803
kamA LBF_1744 Lysine 2,3-aminomutasechromosome I CDS1879791 1209 - 0.407775
ldcC LBF_0670 Lysine decarboxylasechromosome I CDS706263 2268 - 0.441799
leuA-1 LBF_1067 Isopropylmalate/homocitrate/citramalatesynthasechromosome I CDS1159647 1185 - 0.411814
leuA-2 LBF_1792 2-isopropylmalate synthasechromosome I CDS1941998 1518 + 0.476285
leuA-3 LBF_1237 2-isopropylmalate/homocitrate synthasechromosome I CDS1352361 1536 + 0.421875
leuB-1 LBF_2251 3-isopropylmalate dehydrogenasechromosome I CDS2392830 1080 + 0.432407
leuC LBF_1575 3-isopropylmalate dehydratase, large subunitchromosome I CDS1703797 1395 + 0.448029
leuC-1 LBF_1180 3-isopropylmalate dehydratase, large subunitchromosome I CDS1285119 1404 + 0.420228
leuD LBF_1576 3-isopropylmalate dehydratase, small subunitchromosome I CDS1705193 627 + 0.393939
leuD-1 LBF_1181 3-isopropylmalate dehydratase, small subunitchromosome I CDS1286519 627 + 0.403509
lysA LBF_1380 Diaminopimelate decarboxylasechromosome I CDS1504439 1269 + 0.432624
lysC LBF_0182 Aspartate kinasechromosome I CDS186967 1215 - 0.42963
metC LBF_2487 Cystathionine beta-lyasechromosome I CDS2660924 1173 - 0.41688
metF LBF_3162 5,10-methylenetetrahydrofolate reductasechromosome I CDS3396352 888 + 0.404279
metH LBF_4176 Methionine synthasechromosome II CDS179955 3717 - 0.426688
metX LBF_1541 Homoserine O-acetyltransferasechromosome I CDS1673736 1137 - 0.412489
metY LBF_1542 O-acetylhomoserineaminocarboxypropyltransferasechromosome I CDS1674881 1305 - 0.425287
pepB LBF_0431 Leucyl aminopeptidasechromosome I CDS451460 1485 - 0.43165
pepN LBF_3301 Membrane alanyl aminopeptidasechromosome I CDS3545747 2643 + 0.368899
pepN-1 LBF_1825 Membrane alanyl aminopeptidasechromosome I CDS1976995 2580 - 0.383333
pepP LBF_1735 Xaa-Pro aminopeptidasechromosome I CDS1871472 1320 - 0.355303
pheA LBF_2319 Bifunctional prephenate dehydratase/chorismate mutasechromosome I CDS2465846 1092 - 0.382784
proA LBF_1725 Glutamate-5-semialdehyde dehydrogenasechromosome I CDS1861137 1266 + 0.419431
proB LBF_1724 Glutamate 5-kinasechromosome I CDS1860270 864 + 0.377315
proC LBF_1282 Pyrroline-5-carboxylate reductasechromosome I CDS1395994 792 + 0.479798
prsA LBF_0229 Ribose-phosphate diphosphokinasechromosome I CDS231158 942 - 0.43949
serB LBF_0801 Phosphoserine phosphatasechromosome I CDS850447 918 + 0.399782
serC LBF_2298 Phosphoserine transaminasechromosome I CDS2444831 1098 + 0.396175
speD LBF_2216 Adenosylmethionine decarboxylasechromosome I CDS2356798 762 + 0.38189
speE LBF_4103 Spermidine synthasechromosome II CDS101357 846 + 0.405437
thrA LBF_0064 Homoserine dehydrogenasechromosome I CDS68104 1284 - 0.453271
thrB LBF_1098 Homoserine kinasechromosome I CDS1194555 954 + 0.401468
thrC LBF_0252 Threonine synthasechromosome I CDS256108 1350 + 0.451852
trpA LBF_2527 Tryptophan synthase alpha chainchromosome I CDS2705067 801 - 0.401998
trpB LBF_2528 Tryptophan synthase beta chainchromosome I CDS2705864 1191 - 0.43157
trpC LBF_1155 Indole-3-glycerol-phosphate synthasechromosome I CDS1254442 777 + 0.382239
trpD LBF_1344 Anthranilate phosphoribosyltransferasechromosome I CDS1463049 1029 + 0.479106
trpE LBF_0030 Anthranilate synthase (component I)chromosome I CDS32687 1434 + 0.400976
trpF LBF_0803 Phosphoribosylanthranilate isomerasechromosome I CDS853841 633 - 0.4297
trpG LBF_0031 Anthranilate synthase (component II)chromosome I CDS34132 606 + 0.405941
trpG-1 LBF_0058 Anthranilate synthase (component II)chromosome I CDS61321 570 + 0.382456
tufB LBF_1915 Protein-synthesizing GTPase complex, EF-Tu componentchromosome I CDS2047422 1206 - 0.427032
tyrA LBF_2318 Bifunctional prephenate dehydrogenase/chorismate mutasechromosome I CDS2464956 894 - 0.392617