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COG category: Amino acid transport and metabolism
Organism: Leptospira biflexa serovar Patoc strain Patoc 1 (Paris), Patoc 1 (Paris)

Number of genes found: 184

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Leptospira biflexa serovar Patoc strain Patoc 1 (Paris), Patoc 1 (Paris)
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
NA LEPBI_II0271 Conserved hypothetical proteinchromosome II CDS263796 309 + 0.385113
NA LEPBI_I0242 Putative sodium:solute symporter; putative membrane proteinchromosome I CDS232411 1593 + 0.405524
NA LEPBI_I2353 Putative para-aminobenzoate synthase component I (ADC synthase)chromosome I CDS2422418 1866 + 0.384244
NA LEPBI_I1109 Putative sodium:solute symporter family proteinchromosome I CDS1155642 1434 - 0.377964
NA LEPBI_I0966 Putative arylesterasechromosome I CDS1002234 663 + 0.410256
NA LEPBI_I0744 Conserved hypothetical protein; putative membrane proteinchromosome I CDS759941 1206 - 0.41791
NA LEPBI_I3256 Putative aminotransferasechromosome I CDS3370121 1194 + 0.350921
NA LEPBI_I1118 Putative amine oxidase (flavin-containing)chromosome I CDS1164780 1377 - 0.403776
NA LEPBI_I1390 Hypothetical protein; putative membrane protein; putative signal peptidechromosome I CDS1446134 1188 + 0.414983
NA LEPBI_I3053 Putative L-threonine 3-dehydrogenasechromosome I CDS3165809 1023 + 0.443793
NA LEPBI_I2755 Putative permease, major facilitator superfamily (MFS); putative membrane proteinchromosome I CDS2848697 1335 + 0.362547
NA LEPBI_I2910 Putative transporter; putative membrane proteinchromosome I CDS3010096 390 - 0.397436
NA LEPBI_I0668 Permease, MFS superfamily; putative membrane proteinchromosome I CDS671810 1254 - 0.383573
NA LEPBI_I0912 Putative PLP-dependent aminotransferasechromosome I CDS942580 1302 + 0.378648
NA LEPBI_I1728 Sodium:solute symporter family protein; putative membrane protein; putative signal peptidechromosome I CDS1800479 1731 - 0.378394
NA LEPBI_I2978 conserved hypothetical proteinchromosome I CDS3080833 1581 + 0.42315
NA LEPBI_I0454 Putative amino-acid transporter; putative membrane proteinchromosome I CDS449859 1377 - 0.406681
NA LEPBI_I2314 Putative aspartate aminotransferase (Transaminase A; AspAT)chromosome I CDS2383377 1089 - 0.449954
NA LEPBI_I2650 ABC-type transport system, permease, putative sperimidine/putrescine transport protein PotC; putative membrane proteinchromosome I CDS2746185 804 - 0.432836
NA LEPBI_I1492 Putative lactoylglutathione lyasechromosome I CDS1554336 462 + 0.400433
NA LEPBI_I1862 Putative sodium:solute symporter family; putative membrane protein; putative signal peptidechromosome I CDS1952205 1311 + 0.409611
NA LEPBI_I0848 ABC-type transport system, periplasmic componentchromosome I CDS864062 1425 - 0.360702
NA LEPBI_I2961 Transporter, MFS superfamily; putative membrane proteinchromosome I CDS3062874 1359 - 0.390728
NA LEPBI_I2308 Putative transporter, MFS superfamily; putative membrane resistancechromosome I CDS2377641 1281 - 0.384856
NA LEPBI_I2980 Putative amino acid permease; putative membrane proteinchromosome I CDS3084491 1305 - 0.390805
NA LEPBI_I1870 Putative permease, MFS superfamily; putative membrane proteinchromosome I CDS1961265 1332 - 0.414414
NA LEPBI_I0820 Putative permease, DMT superfamily; putative membrane proteinchromosome I CDS833694 888 - 0.367117
NA LEPBI_II0092 Putative transport system kinase; putative ArgK proteinchromosome II CDS89778 1116 - 0.458781
NA LEPBI_I2322 ABC-type transport system, periplasmic binding proteinchromosome I CDS2392376 1848 - 0.369048
NA LEPBI_I2877 Conserved hypothetical protein; putative membrane proteinchromosome I CDS2969877 588 - 0.423469
NA LEPBI_I1028 Putative aspartate aminotransferasechromosome I CDS1069580 1227 + 0.449063
NA LEPBI_I2623 Hypothetical proteinchromosome I CDS2716702 396 + 0.338384
NA LEPBI_I0693 Lysine decarboxylasechromosome I CDS700693 2268 - 0.441799
NA LEPBI_I3305 Putative phosphoribosyl-AMP cyclohydrolasechromosome I CDS3417531 609 - 0.369458
NA LEPBI_I2625 Hypothetical protein; putative signal peptidechromosome I CDS2718163 834 + 0.368106
NA LEPBI_I0894 Putative glyoxalase family proteinchromosome I CDS915996 483 - 0.407867
NA LEPBI_I0831 Putative hydrolase; putative signal peptidechromosome I CDS844016 726 + 0.391185
NA LEPBI_II0189 Putative drug/metabolite exporterchromosome II CDS190312 942 - 0.39172
NA LEPBI_I2106 Aminotransferase class-V proteinchromosome I CDS2200613 1131 + 0.366048
NA LEPBI_I2923 Conserved hypothetical proteinchromosome I CDS3020400 1038 + 0.434489
NA LEPBI_I0111 Hypothetical protein; putative membrane protein; putative signal peptidechromosome I CDS113710 1167 - 0.40617
NA LEPBI_I0225 Conserved hypothetical protein; putative membrane proteinchromosome I CDS216502 897 + 0.365663
NA LEPBI_I2651 ABC-type transport system, permease, putative sperimidine/putrescine transport protein PotH; putative membrane proteinchromosome I CDS2746978 918 - 0.405229
NA LEPBI_I0941 Hypothetical proteinchromosome I CDS973221 1197 - 0.390142
NA LEPBI_I3251 Putative glyoxalase/bleomycin resistance protein or fosfomycin resistance protein FosBchromosome I CDS3366117 351 - 0.401709
NA LEPBI_I1887 Putative amino acid permeasechromosome I CDS1980395 1452 + 0.407025
NA LEPBI_I2836 ABC-type transport system, binding-protein-dependent transport system, inner membrane componentchromosome I CDS2928121 771 - 0.373541
NA LEPBI_I2567 Putative Cys/Met metabolism PLP-dependent enzymechromosome I CDS2654066 1185 - 0.416878
NA LEPBI_I1428 Hypothetical protein; putative signal peptidechromosome I CDS1490744 1752 + 0.416096
NA LEPBI_I1622 ABC-type transport system, ATP binding protein, putative dipeptide/oligopeptide/nickel transport systemchromosome I CDS1695456 606 + 0.39769
NA LEPBI_I2164 Putative glyoxalase family proteinchromosome I CDS2253819 393 + 0.305344
NA LEPBI_I2364 Putative permease, Major Facilitator Superfamily (MFS); putative membrane proteinchromosome I CDS2434815 1179 - 0.373198
NA LEPBI_I0823 Putative permease, DMT superfamily; putative membrane proteinchromosome I CDS836472 915 + 0.382514
NA LEPBI_I3370 Conserved hypothetical protein with transglutaminase-like domainchromosome I CDS3485362 882 - 0.346939
NA LEPBI_I3116 Putative glyoxalase/bleomycin resistance protein, dioxygenase domainchromosome I CDS3230076 432 - 0.377315
NA LEPBI_I3341 Carboxypeptidase, M32 familychromosome I CDS3446887 1545 - 0.371521
NA LEPBI_II0100 Hypothetical protein; putative membrane proteinchromosome II CDS97322 942 + 0.446921
NA LEPBI_I0303 Putative permease of the major facilitator superfamily; putative signal peptidechromosome I CDS297149 1227 - 0.414833
NA LEPBI_I2071 Putative transporter, Major Facilitator Superfamily (MFS)chromosome I CDS2160665 1242 + 0.411433
NA LEPBI_I3289 Putative polyol dehydrogenasechromosome I CDS3401568 1443 - 0.406791
NA LEPBI_I1453 Putative bifunctional protein: transcriptional regulator/amino transferasechromosome I CDS1515789 1428 - 0.361345
NA LEPBI_I2653 Putative spermidine/putrescine-binding periplasmic protein PotF/PotD; putative signal peptidechromosome I CDS2748966 1170 - 0.410256
NA LEPBI_I2837 ABC-type transport system, binding-protein-dependent transport system, inner membrane componentchromosome I CDS2928881 891 - 0.344557
NA LEPBI_I3465 ABC-type transport system, periplasmic component; putative signal peptidechromosome I CDS3583682 855 - 0.356725
NA LEPBI_I3372 Conserved hypothetical protein with transglutaminase-like domainchromosome I CDS3488771 3258 - 0.380602
NA LEPBI_I2652 Putative putrescine transport ATP-binding protein PotGchromosome I CDS2747906 1026 - 0.420078
NA LEPBI_I0695 Putative valine--pyruvate transaminasechromosome I CDS705324 1275 - 0.436863
NA LEPBI_I0042 Putative acetyltransferasechromosome I CDS42233 486 - 0.327161
NA LEPBI_I1454 Putative aspartate aminotransferase (Transaminase A; ASPAT)chromosome I CDS1517259 1194 + 0.404523
NA LEPBI_I1597 Conserved hypothetical protein; putative signal peptidechromosome I CDS1673774 834 - 0.351319
NA LEPBI_II0192 Conserved hypothetical proteinchromosome II CDS191936 357 + 0.40056
aatA LEPBI_I2543 Aspartate aminotransferase A (Transaminase A; AspAT)chromosome I CDS2631001 1218 - 0.429392
argB LEPBI_II0170 Acetylglutamate kinasechromosome II CDS166863 891 + 0.438833
argC LEPBI_I1483 N-acetyl-gamma-glutamyl-phosphate reductasechromosome I CDS1541295 1041 - 0.410183
argD LEPBI_I2316 Acetylornithine aminotransferase (ACOAT)chromosome I CDS2386263 1218 + 0.401478
argF LEPBI_I2432 Ornithine carbamoyltransferase (OTCase)chromosome I CDS2505716 933 + 0.386924
argG LEPBI_I0087 Argininosuccinate synthase (Citrulline--aspartate ligase)chromosome I CDS86865 1209 - 0.417701
argH LEPBI_I1606 Argininosuccinate lyase (Arginosuccinase; ASAL)chromosome I CDS1680667 1437 + 0.402227
argK LEPBI_II0043 Putative periplasmic kinasechromosome II CDS41380 999 - 0.397397
aroA LEPBI_I2598 3-phosphoshikimate 1-carboxyvinyltransferasechromosome I CDS2685297 1287 - 0.428904
aroB1 LEPBI_I2469 3-dehydroquinate synthasechromosome I CDS2551439 1164 - 0.35567
aroB2 LEPBI_I2582 3-dehydroquinate synthasechromosome I CDS2669785 1101 - 0.393279
aroC LEPBI_I3408 Chorismate synthasechromosome I CDS3528236 1137 - 0.443272
aroD LEPBI_I3412 3-dehydroquinate dehydratasechromosome I CDS3531433 717 + 0.35007
aroE LEPBI_I0837 Shikimate dehydrogenasechromosome I CDS850716 891 - 0.411897
aroH LEPBI_I0272 Phospho-2-dehydro-3-deoxyheptonate aldolase, Trp-sensitivechromosome I CDS265448 1050 - 0.419048
aroK LEPBI_II0072 Shikimate kinasechromosome II CDS70798 546 - 0.399267
asd LEPBI_II0275 Aspartate semialdehyde dehydrogenasechromosome II CDS268990 1050 - 0.435238
aspA LEPBI_II0048 Aspartate ammonia-lyase (aspartase)chromosome II CDS47098 1407 - 0.428571
aspC LEPBI_I1409 Aspartate aminotransferase (Transaminase A; ASPAT)chromosome I CDS1467755 1143 - 0.422572
carA LEPBI_I0815 Carbamoyl-phosphate synthase, small chain (Carbamoyl-phosphate synthetase glutamine chain)chromosome I CDS830549 1125 - 0.423111
carB LEPBI_I1281 Carbamoyl-phosphate synthase large chain (Carbamoyl-phosphate synthetase ammonia chain)chromosome I CDS1333121 3312 + 0.417271
csdB LEPBI_II0166 Cysteine desulfurasechromosome II CDS162752 1203 - 0.41064
cysD LEPBI_I1183 Sulfate adenylyltransferase subunit 2chromosome I CDS1231561 909 - 0.407041
cysE LEPBI_I0033 Serine acetyltransferasechromosome I CDS33266 717 - 0.425384
cysH LEPBI_I1184 5'-adenylylsulfate reductase (APS reductase; cysH-like)chromosome I CDS1232476 726 - 0.446281
cysK1 LEPBI_I1162 Cysteine synthase Achromosome I CDS1209101 915 + 0.416393
cysK2 LEPBI_I3089 Cysteine synthase Achromosome I CDS3197443 975 + 0.43282
cysM LEPBI_I1628 Cysteine synthase Bchromosome I CDS1700819 1002 + 0.423154
dapA LEPBI_I0733 Dihydrodipicolinate synthase (DHDPS)chromosome I CDS747953 885 + 0.437288
dapB LEPBI_I0734 Dihydrodipicolinate reductase (DHPR)chromosome I CDS748830 804 + 0.414179
dapE LEPBI_I3358 Succinyl-diaminopimelate desuccinylase (SDAP); putative signal peptidechromosome I CDS3468651 1443 + 0.397782
dapF LEPBI_I0585 Diaminopimelate epimerase (DAP epimerase)chromosome I CDS587723 861 + 0.444832
dppB LEPBI_I0326 ABC-type transport system, permease component; putative signal peptidechromosome I CDS325980 1011 + 0.367953
dppC LEPBI_I0327 ABC-type transport system, permease componentchromosome I CDS326987 1050 + 0.373333
dppD LEPBI_I0328 ABC-type transport system, Phosphate-transporting ATPasechromosome I CDS328033 990 + 0.371717
dppF LEPBI_I0329 Oligopetide ABC-type transport system, ATPasechromosome I CDS329015 957 + 0.380355
gabT LEPBI_I2655 4-aminobutyrate aminotransferasechromosome I CDS2751728 1290 + 0.455814
gcvH LEPBI_I3189 Glycine cleavage system H proteinchromosome I CDS3299827 393 + 0.412214
gcvP LEPBI_I3190 Glycine dehydrogenase [decarboxylating] (Glycine cleavage system P protein)chromosome I CDS3300230 2922 + 0.421971
gcvT LEPBI_I3188 Aminomethyltransferase (Glycine cleavage system T protein)chromosome I CDS3298699 1113 + 0.415993
ggtA LEPBI_I1914 Gamma-glutamyltranspeptidase (Gamma-glutamyltransferase large chain; Gamma-glutamyltransferase small) chainchromosome I CDS2003747 1773 - 0.425268
ggtB LEPBI_I3178 Gamma-glutamyltranspeptidase (Precursor)chromosome I CDS3290324 1752 - 0.408676
glnA LEPBI_I1418 Glutamine synthetase (Glutamate--ammonia ligase)chromosome I CDS1480399 1461 - 0.403149
glnB LEPBI_I0793 Nitrogen regulatory protein PIIchromosome I CDS812851 348 - 0.393678
glnK LEPBI_I2407 Nitrogen regulatory protein P-IIchromosome I CDS2479124 345 - 0.350725
gloA LEPBI_I0762 Lactoylglutathione lyasechromosome I CDS778720 423 + 0.401891
gltB LEPBI_II0067 Glutamate synthase large chain precursorchromosome II CDS62642 4578 - 0.450633
gltD LEPBI_II0066 Glutamate synthase (NADPH)chromosome II CDS61207 1443 - 0.458073
glyA LEPBI_I1006 Serine hydroxymethyltransferase (Serine methylase; SHMT)chromosome I CDS1051467 1251 - 0.431655
hisA LEPBI_I0876 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerasechromosome I CDS894365 744 + 0.395161
hisB LEPBI_I0874 Imidazoleglycerol-phosphate dehydratase (IGPD)chromosome I CDS893149 594 + 0.442761
hisC LEPBI_I1846 Histidinol-phosphate aminotransferase (Imidazole acetol-phosphate transaminase)chromosome I CDS1938131 1095 + 0.411872
hisD LEPBI_I1825 Histidinol dehydrogenasechromosome I CDS1910606 1293 - 0.435421
hisE LEPBI_I0939 Phosphoribosyl-ATP pyrophosphatase (PRA-PH)chromosome I CDS971855 279 + 0.34767
hisF LEPBI_I1729 Imidazole glycerol phosphate synthase subunit HisFchromosome I CDS1802206 768 - 0.414062
hisG LEPBI_I2593 ATP phosphoribosyltransferasechromosome I CDS2679763 615 - 0.439024
hisH LEPBI_I0875 Imidazole glycerol phosphate synthase subunit HisHchromosome I CDS893739 627 + 0.38118
hom LEPBI_I0064 Homoserine dehydrogenase (HDH)chromosome I CDS64057 1284 - 0.453271
hutH LEPBI_I0730 Histidine ammonia-lyase (Histidase)chromosome I CDS744275 1545 + 0.399353
ilvA LEPBI_I1590 Threonine dehydratase biosyntheticchromosome I CDS1666115 1278 + 0.389671
ilvB1 LEPBI_I0792 Acetolactate synthase isozyme I large subunitchromosome I CDS811077 1722 + 0.394309
ilvB2 LEPBI_I2362 Acetolactate synthase large subunitchromosome I CDS2431654 1728 - 0.447338
ilvC LEPBI_I0708 Ketol-acid reductoisomerasechromosome I CDS718620 1002 - 0.44511
ilvD LEPBI_I3352 Dihydroxy-acid dehydratase (DAD)chromosome I CDS3461420 1677 - 0.42099
ilvE LEPBI_I3478 Branched-chain-amino-acid aminotransferasechromosome I CDS3597675 924 + 0.410173
ilvH LEPBI_I2361 Acetolactate synthase small subunitchromosome I CDS2431169 489 - 0.423313
ilvI LEPBI_I0605 Acetolactate synthase large subunitchromosome I CDS606806 1764 - 0.395125
kamA LEPBI_I1797 L-lysine 2,3-aminomutasechromosome I CDS1874403 1209 - 0.407775
kamA LEPBI_II0202 L-lysine 2,3-aminomutasechromosome II CDS204118 1065 + 0.433803
leuA LEPBI_I1845 2-isopropylmalate synthase (Alpha-isopropylmalate synthase; Alpha-IPM synthetase)chromosome I CDS1936625 1503 + 0.476381
leuA1 LEPBI_I1291 2-isopropylmalate synthase (Alpha-isopropylmalate synthase; Alpha-IPM synthetase 1)chromosome I CDS1346973 1536 + 0.421875
leuA2 LEPBI_I1108 2-isopropylmalate synthase (Alpha-isopropylmalate synthase; Alpha-IPM synthetase)chromosome I CDS1154259 1185 - 0.411814
leuB LEPBI_I2317 3-isopropylmalate dehydrogenasechromosome I CDS2387477 1080 + 0.432407
leuC1 LEPBI_I1229 3-isopropylmalate dehydratase large subunitchromosome I CDS1279731 1404 + 0.420228
leuC2 LEPBI_I1625 3-isopropylmalate dehydratase large subunitchromosome I CDS1698410 1395 + 0.448029
leuD1 LEPBI_I1230 3-isopropylmalate dehydratase small subunitchromosome I CDS1281131 627 + 0.403509
leuD2 LEPBI_I1626 3-isopropylmalate dehydratase small subunitchromosome I CDS1699806 627 + 0.393939
lysA LEPBI_I1434 Diaminopimelate decarboxylase (DAP decarboxylase)chromosome I CDS1499050 1269 + 0.432624
lysC LEPBI_I0187 Aspartokinasechromosome I CDS182925 1215 - 0.42963
metF LEPBI_I3275 5,10-methylenetetrahydrofolate reductasechromosome I CDS3387975 888 + 0.404279
metH LEPBI_II0183 Methionine synthasechromosome II CDS179983 3753 - 0.424993
metX LEPBI_I1592 Homoserine O-acetyltransferasechromosome I CDS1668349 1137 - 0.412489
metY LEPBI_I1593 O-acetylhomoserine sulfhydrylasechromosome I CDS1669494 1305 - 0.425287
mvaB LEPBI_I1932 Hydroxymethylglutaryl-CoA lyasechromosome I CDS2019208 900 + 0.396667
pepA LEPBI_I0450 Aminopeptidase, M17 familychromosome I CDS445890 1485 - 0.43165
pepN1 LEPBI_I1880 Aminopeptidase N, peptidase M1 familychromosome I CDS1971607 2580 - 0.383333
pepN2 LEPBI_I3417 Aminopeptidase N, peptidase M1 familychromosome I CDS3537397 2643 + 0.368899
pepP LEPBI_I1788 Xaa-Pro aminopeptidase (Aminopeptidase P II)chromosome I CDS1866084 1320 - 0.355303
pheA LEPBI_I2387 P-proteinchromosome I CDS2458987 1092 - 0.382784
prlC LEPBI_I0979 Oligopeptidase Achromosome I CDS1014066 1947 - 0.386749
proA LEPBI_I1778 Gamma-glutamyl phosphate reductasechromosome I CDS1855749 1266 + 0.419431
proB LEPBI_I1777 Glutamate 5-kinase (Gamma-glutamyl kinase; GK)chromosome I CDS1854882 864 + 0.377315
proC LEPBI_I1336 Pyrroline-5-carboxylate reductase (P5CR; P5C reductase)chromosome I CDS1390654 744 + 0.481183
prs LEPBI_I0236 Ribose-phosphate pyrophosphokinase (Phosphoribosyl pyrophosphate synthetase)chromosome I CDS227116 942 - 0.43949
serA1 LEPBI_I2005 D-3-phosphoglycerate dehydrogenase (PGDH)chromosome I CDS2086594 987 - 0.371834
serA2 LEPBI_I1899 D-3-phosphoglycerate dehydrogenase (PGDH)chromosome I CDS1991775 1224 + 0.402778
serB LEPBI_I0832 Phosphoserine phosphatasechromosome I CDS844744 918 + 0.399782
serC LEPBI_I2366 Phosphoserine aminotransferase (PSAT)chromosome I CDS2437972 1098 + 0.396175
speD LEPBI_I2285 S-adenosylmethionine decarboxylase proenzyme (AdoMetDC; SamDC)chromosome I CDS2351411 762 + 0.38189
speE LEPBI_II0106 Spermidine synthasechromosome II CDS101386 846 + 0.405437
sufS LEPBI_I1917 Cysteine desulfurasechromosome I CDS2006245 1245 - 0.406426
thrB LEPBI_I1140 Homoserine kinase (HSK; HK)chromosome I CDS1189167 954 + 0.401468
thrC LEPBI_I0259 Threonine synthasechromosome I CDS252066 1350 + 0.451852
trpA LEPBI_I2607 Tryptophan synthase alpha proteinchromosome I CDS2696681 801 - 0.401998
trpB LEPBI_I2608 Tryptophan synthase beta chainchromosome I CDS2697478 1191 - 0.43157
trpC LEPBI_I1198 Indole-3-glycerol phosphate synthase (IGPS)chromosome I CDS1249054 777 + 0.382239
trpD LEPBI_I1398 Anthranilate phosphoribosyltransferasechromosome I CDS1457697 993 + 0.480363
trpE LEPBI_I0028 Anthranilate synthase component Ichromosome I CDS28640 1434 + 0.400976
trpF LEPBI_I0834 N-(5'-phosphoribosyl)anthranilate isomerase (PRAI)chromosome I CDS848138 633 - 0.4297
trpG1 LEPBI_I0029 Anthranilate synthase component IIchromosome I CDS30085 606 + 0.405941
trpG2 LEPBI_I0058 Anthranilate synthase component IIchromosome I CDS57274 570 + 0.382456
tuf LEPBI_I1966 Elongation factor Tu (EF-Tu)chromosome I CDS2042033 1206 - 0.427032
tyrA LEPBI_I2386 Prephenate dehydrogenasechromosome I CDS2458097 894 - 0.392617