SGB - The Spirochetes Genome Browser - Gene list

Title

+ Borrelia afzelii, PKo

+ Borrelia burgdorferi ZS7, ZS7

+ Borrelia burgdorferi, B31

+ Borrelia duttonii Ly, Ly

+ Borrelia garinii High passage (300), PBi

+ Borrelia garinii, PBi

+ Borrelia hermsii DAH, DAH

+ Borrelia recurrentis A1, A1

+ Borrelia turicatae 91E135, 91E135

+ Leptospira biflexa serovar Patoc strain Patoc 1 (Ames), Patoc 1 (Ames)

+ Leptospira biflexa serovar Patoc strain Patoc 1 (Paris), Patoc 1 (Paris)

+ Leptospira borgpetersenii serovar Hardjo-bovis JB197, JB197

+ Leptospira borgpetersenii serovar Hardjo-bovis L550, L550

+ Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130

+ Leptospira interrogans serovar lai str. 56601

+ Treponema denticola ATCC 35405

+ Treponema pallidum

+ Treponema pallidum subsp. pallidum SS14, SS14

+ COG functional categories

+ (Clickable) linear whole genome views

+ Horizontal gene transfer (predicted by SIGI-HMM)

+ Sequence retrieval

+ Advanced search

+ Sequence similarity search

+ Best bidirectional hits (protein-based analysis)

+ Gene core sets (protein-based analysis)

+ Gene partnerships (DNA-based analysis)

+ Protein variations (protein-based analysis)

+ Synteny analysis (protein-based analysis)

+ Gene conservation (protein-based analysis)

+ Codon and amino acid usages (DNA- and protein-based analysis)

+ Alignments of whole reference and target genomic elements (DNA-based analysis)

Gene list

Applied filters:

COG category: Nucleotide transport and metabolism
Genomic element: chromosome

Number of genes found: 22

Free access


Show UniProt / TrEMBL protein name		View in Fasta format (DNA)		View in Fasta format (Protein)

Borrelia recurrentis A1, A1

Name	Locus tag	Product / Description	Genomic element	Type	Begin	Length	Strand	GC-content
NA	BRE_729	adenylyl cyclase, CyaB-type, putative	chromosome	CDS	780431	522	-	0.180077
NA	BRE_247	rdgB/HAM1 protein	chromosome	CDS	266793	600	+	0.228333
NA	BRE_829	cytidylate kinase	chromosome	CDS	890045	540	+	0.261111
NA	BRE_314	uncharacterized conserved protein	chromosome	CDS	337220	831	-	0.199759
adk	BRE_415	adenylate kinase	chromosome	CDS	448561	648	+	0.274691
apt	BRE_785	adenine phosphoribosyltransferase	chromosome	CDS	839972	561	+	0.326203
cdd	BRE_624	cytidine deaminase	chromosome	CDS	664360	456	-	0.289474
cmk	BRE_131	cytidylate kinase	chromosome	CDS	137086	657	-	0.266362
dck	BRE_238	deoxyguanosine/deoxyadenosine kinase(I) subunit 2	chromosome	CDS	256624	621	-	0.252818
hpt	BRE_422	hypoxanthine phosphoribosyltransferase	chromosome	CDS	460014	525	+	0.260952
ndk	BRE_469	nucleoside-diphosphate kinase	chromosome	CDS	504437	582	+	0.310997
nucA	BRE_408	endonuclease precursor	chromosome	CDS	441802	885	+	0.261017
pfs-1	BRE_374	5'-methylthioadenosine nucleosidase/S-adenosylhomocysteine	chromosome	CDS	406440	714	+	0.288515
pkcI	BRE_377	protein kinase C1 inhibitor	chromosome	CDS	408938	432	-	0.266204
prs	BRE_549	phosphoribosyl pyrophosphate synthetase	chromosome	CDS	576084	1221	+	0.303849
purA	BRE_423	adenylosuccinate synthase	chromosome	CDS	460548	1284	+	0.285826
purB	BRE_424	adenylosuccinate lyase	chromosome	CDS	461816	1395	+	0.283154
pyrG	BRE_582	CTP synthase	chromosome	CDS	612097	1656	+	0.310386
smbA	BRE_578	uridylate kinase	chromosome	CDS	608142	690	-	0.268116
tdk	BRE_801	thymidine kinase	chromosome	CDS	852817	1137	+	0.264732
tmk	BRE_803	thymidylate kinase	chromosome	CDS	854611	609	-	0.247947
udk	BRE_20	uridine kinase	chromosome	CDS	27587	621	-	0.285024