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2024-05-10 06:56:17

Gene list

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COG category: Coenzyme transport and metabolism
Organism: Leptospira biflexa serovar Patoc strain Patoc 1 (Paris), Patoc 1 (Paris)

Number of genes found: 107

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Leptospira biflexa serovar Patoc strain Patoc 1 (Paris), Patoc 1 (Paris)
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
NA LEPBI_I2679 Putative methyltransferasechromosome I CDS2775657 627 + 0.349282
NA LEPBI_p0048 Putative dihydrofolate reductasep74 CDS60015 537 + 0.376164
NA LEPBI_I1779 Putative nicotinate-nucleotide adenylyltransferasechromosome I CDS1857016 591 + 0.328257
NA LEPBI_I1214 Putative dihydrofolate reductasechromosome I CDS1266086 564 + 0.359929
NA LEPBI_I1728 Sodium:solute symporter family protein; putative membrane protein; putative signal peptidechromosome I CDS1800479 1731 - 0.378394
NA LEPBI_I0407 Conserved hypothetical proteinchromosome I CDS405287 564 - 0.404255
NA LEPBI_I0721 Putative NAD-dependent deacetylasechromosome I CDS735265 756 - 0.416667
NA LEPBI_I0356 Hypothetical protein; putative transferasechromosome I CDS355772 1602 + 0.401998
NA LEPBI_I2777 Putative molybdopterin-guanine dinucleotide biosynthesis protein MobAchromosome I CDS2876264 585 + 0.323077
NA LEPBI_I2470 Conserved hypothetical protein; putative membrane proteinchromosome I CDS2552608 864 - 0.377315
NA LEPBI_I1862 Putative sodium:solute symporter family; putative membrane protein; putative signal peptidechromosome I CDS1952205 1311 + 0.409611
NA LEPBI_I0819 Putative pterin-4-alpha-carbinolamine dehydratasechromosome I CDS833389 309 - 0.385113
NA LEPBI_I2311 Oxygen-independent coproporphyrinogen III oxidase-like proteinchromosome I CDS2380672 1224 + 0.398693
NA LEPBI_I1109 Putative sodium:solute symporter family proteinchromosome I CDS1155642 1434 - 0.377964
NA LEPBI_I1240 Putative dihydrofolate reductasechromosome I CDS1289971 555 - 0.344144
NA LEPBI_I1156 Putative prenyltransferase; putative membrane protein; putative signal peptidechromosome I CDS1204392 900 + 0.387778
NA LEPBI_I2702 Putative transcriptional regulator, NadR familychromosome I CDS2799101 1044 + 0.395594
NA LEPBI_I1983 Putative 3-octaprenyl-4-hydroxybenzoate carboxy-lyase family proteinchromosome I CDS2060775 1773 - 0.457417
NA LEPBI_I0242 Putative sodium:solute symporter; putative membrane proteinchromosome I CDS232411 1593 + 0.405524
NA LEPBI_I0120 Conserved hypothetical proteinchromosome I CDS123425 564 - 0.406028
NA LEPBI_I1780 Conserved hypothetical proteinchromosome I CDS1857609 606 + 0.369637
NA LEPBI_I1007 Putative lipoate-protein ligase Achromosome I CDS1052714 870 - 0.406897
NA LEPBI_I2353 Putative para-aminobenzoate synthase component I (ADC synthase)chromosome I CDS2422418 1866 + 0.384244
NA LEPBI_I1801 Conserved hypothetical proteinchromosome I CDS1878686 1104 - 0.459239
NA LEPBI_I0659 Putative riboflavin biosynthesis protein RibD:Riboflavin-specific deaminasechromosome I CDS663605 642 - 0.456386
NA LEPBI_I2701 Hypothetical proteinchromosome I CDS2797689 1416 + 0.413136
NA LEPBI_I0185 Conserved hypothetical proteinchromosome I CDS180313 1551 - 0.34236
NA LEPBI_I3112 Putative 6-pyruvoyl tetrahydrobiopterin synthasechromosome I CDS3227644 405 - 0.45679
ahcY LEPBI_II0185 S-adenosylhomocysteine hydrolasechromosome II CDS184126 1320 - 0.411364
bioA LEPBI_I0827 Adenosylmethionine-8-amino-7-oxononanoate aminotransferasechromosome I CDS839741 1332 + 0.380631
bioB LEPBI_I0828 Biotin synthase (biotin synthetase)chromosome I CDS841130 1056 + 0.427083
bioD LEPBI_I0826 Dethiobiotin synthetasechromosome I CDS839044 708 + 0.399718
bioF LEPBI_I0722 8-amino-7-oxononanoate synthasechromosome I CDS736095 1170 + 0.408547
birA LEPBI_I3273 BirA bifunctional protein; biotin operon repressor/Biotin--[acetyl-CoA-carboxylase] synthetasechromosome I CDS3386330 756 - 0.386243
coaD LEPBI_I0086 Phosphopantetheine adenylyltransferasechromosome I CDS86381 483 - 0.403727
coaE LEPBI_I1450 Dephospho-CoA kinase (Dephosphocoenzyme A kinase)chromosome I CDS1513685 618 - 0.411003
cobA1 LEPBI_I1179 Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase (SUMT)chromosome I CDS1225731 813 - 0.471095
cobA2 LEPBI_I2768 Uroporphyrin-III C-methyltransferasechromosome I CDS2866694 792 + 0.39899
cobS LEPBI_I2939 Cobalamin synthase; putative membrane proteinchromosome I CDS3038134 828 + 0.381643
cobT LEPBI_I2938 Nicotinate-nucleotide--dimethylbenzimidazole phophoribosyltransferase (NN:DBI PRT; N(1)-alpha-phosphoribosyltransferase)chromosome I CDS3037063 1065 + 0.399061
ctaB LEPBI_I2687 Protoheme IX farnesyltransferase (Heme O synthase); putative membrane protein; putative signal peptidechromosome I CDS2784279 858 + 0.414918
cysD LEPBI_I1183 Sulfate adenylyltransferase subunit 2chromosome I CDS1231561 909 - 0.407041
cysH LEPBI_I1184 5'-adenylylsulfate reductase (APS reductase; cysH-like)chromosome I CDS1232476 726 - 0.446281
dfpA LEPBI_I0718 Phosphopantothenoylcysteine decarboxylase (PPCDC; CoaC)chromosome I CDS733563 531 + 0.442561
dfpB LEPBI_I0719 Phosphopantothenate--cysteine ligasechromosome I CDS734090 678 + 0.405605
dxs LEPBI_I2605 1-deoxy-D-xylulose-5-phosphate synthasechromosome I CDS2692366 1890 - 0.439153
folC LEPBI_I0836 FolC bifunctional protein: Folylpolyglutamate synthase/Tetrahydrofolate ynthasechromosome I CDS849470 1215 - 0.409877
folD LEPBI_I1723 FolD bifunctional proteins: Methylenetetrahydrofolate dehydrogenase/Methenyltetrahydrofolate cyclohydrolaschromosome I CDS1795335 876 + 0.410959
folE LEPBI_I3451 GTP cyclohydrolase Ichromosome I CDS3572326 552 - 0.394928
folK LEPBI_I0270 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine pyrophosphokinasechromosome I CDS264050 474 + 0.390295
gshA LEPBI_I1913 Glutamate--cysteine ligase (Gamma-glutamylcysteine synthetase; Gamma-ECS) (GCS)chromosome I CDS2002142 1602 - 0.362672
hemA LEPBI_I1171 Glutamyl-tRNA reductase (GluTR)chromosome I CDS1220381 873 - 0.383734
hemB LEPBI_I1169 Delta-aminolevulinic acid dehydratasechromosome I CDS1217903 954 - 0.390985
hemC LEPBI_I1170 Porphobilinogen deaminase (PBG; Hydroxymethylbilane synthase)chromosome I CDS1218853 1536 - 0.375
hemE LEPBI_I1167 Uroporphyrinogen decarboxylase (URO-D; UPD)chromosome I CDS1215582 1044 - 0.383142
hemG LEPBI_I1165 Protoporphyrinogen oxidase (PPO)chromosome I CDS1213037 1212 - 0.367162
hemH LEPBI_I1164 Ferrochelatase (Protoheme ferro-lyase; Heme synthetase)chromosome I CDS1211978 1089 + 0.393021
hemL1 LEPBI_I1168 Glutamate-1-semialdehyde aminotransferasechromosome I CDS1216629 1278 - 0.4241
hemL2 LEPBI_I0742 Glutamate-1-semialdehyde 2,1-aminomutasechromosome I CDS757654 1467 - 0.438991
hemN LEPBI_I1166 Oxygen-independent coproporphyrinogen III oxidase (Coproporphyrinogenase; Coprogen oxidase)chromosome I CDS1214245 1341 - 0.37733
hemU LEPBI_p0014 ABC-type hemin transport system, permease; putative membrane proteinp74 CDS11136 984 - 0.387195
hemV LEPBI_p0013 ABC-type hemin transport system, ATPasep74 CDS10360 780 - 0.376923
ilvB1 LEPBI_I0792 Acetolactate synthase isozyme I large subunitchromosome I CDS811077 1722 + 0.394309
ilvB2 LEPBI_I2362 Acetolactate synthase large subunitchromosome I CDS2431654 1728 - 0.447338
ilvC LEPBI_I0708 Ketol-acid reductoisomerasechromosome I CDS718620 1002 - 0.44511
ilvE LEPBI_I3478 Branched-chain-amino-acid aminotransferasechromosome I CDS3597675 924 + 0.410173
ilvI LEPBI_I0605 Acetolactate synthase large subunitchromosome I CDS606806 1764 - 0.395125
ispA LEPBI_I0083 Geranyltranstransferasechromosome I CDS82822 924 - 0.401515
ispA2 LEPBI_I0646 Octoprenyl-diphosphate synthase (Octaprenyl pyrophosphate synthetase; OPP synthetase)chromosome I CDS650505 954 + 0.354298
lipA LEPBI_I1462 Lipoyl synthasechromosome I CDS1524432 921 - 0.45494
lipB LEPBI_I2294 Lipoyltransferase (Lipoyl-[acyl-carrier protein]-protein-N-lipoyltransferase; Lipoate-protein ligase B)chromosome I CDS2363877 543 - 0.438306
metK LEPBI_I2968 S-adenosylmethionine synthetasechromosome I CDS3072150 1167 - 0.434447
moaA LEPBI_I2774 Molybdenum cofactor biosynthesis protein Achromosome I CDS2874603 942 + 0.333333
moaCB LEPBI_I2769 Molybdenum cofactor biosynthesis bifunctional protein: molybdenum cofactor biosynthesis protein C/molybdenum cofactor biosynthesis protein Bchromosome I CDS2867495 915 + 0.415301
moaE LEPBI_I2776 Molybdopterin-converting factor subunit 2chromosome I CDS2875798 426 + 0.403756
moeA LEPBI_I2770 Molybdopterin biosynthesis protein MoeAchromosome I CDS2868406 1191 + 0.384551
moeB LEPBI_I2773 Molybdopterin biosynthesis protein MoeBchromosome I CDS2873408 1065 - 0.380282
nadA LEPBI_I0321 Quinolinate synthetase A proteinchromosome I CDS320886 987 + 0.41844
nadB LEPBI_I0473 L-aspartate oxidase (LASPO; Quinolinate synthetase B)chromosome I CDS467471 1602 - 0.421348
nadC LEPBI_I2326 Nicotinate-nucleotide pyrophosphorylase [carboxylating] (Quinolinate phosphoribosyltransferase [decarboxylating]) QAPRTasechromosome I CDS2397650 864 - 0.40625
panB LEPBI_I0271 3-methyl-2-oxobutanoate hydroxymethyltransferasechromosome I CDS264498 807 + 0.449814
panC LEPBI_I1824 Pantoate--beta-alanine ligase (Pantothenate synthetase; Pantoate-activating enzyme)chromosome I CDS1909758 852 - 0.375587
panD LEPBI_I2296 Aspartate 1-decarboxylase (precursor) (Aspartate alpha-decarboxylase)chromosome I CDS2365046 357 + 0.498599
panE LEPBI_I2463 2-dehydropantoate 2-reductasechromosome I CDS2545814 975 + 0.358974
pdxA LEPBI_I1048 4-hydroxythreonine-4-phosphate dehydrogenase (4-(phosphohydroxy)-L-threonine dehydrogenase)chromosome I CDS1090276 945 + 0.470899
pdxH LEPBI_I1407 Pyridoxamine 5'-phosphate oxidasechromosome I CDS1466248 639 - 0.428795
pdxJ LEPBI_I0476 Pyridoxal phosphate biosynthetic protein PdxJ (PNP synthase)chromosome I CDS472054 783 - 0.412516
ptpS LEPBI_I0174 6-pyruvoyl tetrahydrobiopterin synthasechromosome I CDS169536 375 + 0.386667
ribBA LEPBI_I1406 Riboflavin biosynthesis protein RibAchromosome I CDS1464975 1209 + 0.428453
ribD LEPBI_I1403 Riboflavin biosynthesis protein RibDchromosome I CDS1462568 1293 + 0.412993
ribE LEPBI_I1404 Riboflavin synthase alpha chainchromosome I CDS1463864 603 + 0.416252
ribF LEPBI_I3078 Riboflavin biosynthesis protein RibFchromosome I CDS3188901 930 - 0.401075
ribH LEPBI_I2140 6,7-dimethyl-8-ribityllumazine synthasechromosome I CDS2233099 468 - 0.478632
serC LEPBI_I2366 Phosphoserine aminotransferase (PSAT)chromosome I CDS2437972 1098 + 0.396175
sirA LEPBI_I1178 Siroheme synthetase, N-terminal domain proteinchromosome I CDS1225141 594 - 0.415825
sulI LEPBI_I3239 Dihydropteroate synthase type I (DHPS; Dihydropteroate pyrophosphorylase type I)chromosome I CDS3353311 816 + 0.390931
thiC LEPBI_I2303 Thiamine biosynthesis protein ThiCchromosome I CDS2371675 1575 - 0.439365
thiD LEPBI_I0567 Phosphomethylpyrimidine kinase (HMP-phosphate kinase; HMP-P kinase)chromosome I CDS567566 801 - 0.399501
thiE LEPBI_I2715 Thiamine-phosphate pyrophosphorylasechromosome I CDS2810312 633 + 0.467615
thiL LEPBI_I1387 Thiamine-monophosphate kinase (Thiamine-phosphate kinase)chromosome I CDS1444215 909 - 0.479648
thiM LEPBI_I2714 Hydoxyethylthiazole kinasechromosome I CDS2809519 804 + 0.458955
trpE LEPBI_I0028 Anthranilate synthase component Ichromosome I CDS28640 1434 + 0.400976
trpG1 LEPBI_I0029 Anthranilate synthase component IIchromosome I CDS30085 606 + 0.405941
trpG2 LEPBI_I0058 Anthranilate synthase component IIchromosome I CDS57274 570 + 0.382456
ubiA LEPBI_I1023 4-hydroxybenzoate polyprenyltransferase; putative membrane protein; putative signal peptidechromosome I CDS1066335 912 + 0.391447
ubiE LEPBI_II0155 Ubiquinone/menaquinone biosynthesis methyltransferasechromosome II CDS151775 741 + 0.412955
ubiX LEPBI_I1024 3-octaprenyl-4-hydroxybenzoate carboxylyasechromosome I CDS1067243 597 + 0.445561