SGB - The Spirochetes Genome Browser - Gene list

Title

+ Borrelia afzelii, PKo

+ Borrelia burgdorferi ZS7, ZS7

+ Borrelia burgdorferi, B31

+ Borrelia duttonii Ly, Ly

+ Borrelia garinii High passage (300), PBi

+ Borrelia garinii, PBi

+ Borrelia hermsii DAH, DAH

+ Borrelia recurrentis A1, A1

+ Borrelia turicatae 91E135, 91E135

+ Leptospira biflexa serovar Patoc strain Patoc 1 (Ames), Patoc 1 (Ames)

+ Leptospira biflexa serovar Patoc strain Patoc 1 (Paris), Patoc 1 (Paris)

+ Leptospira borgpetersenii serovar Hardjo-bovis JB197, JB197

+ Leptospira borgpetersenii serovar Hardjo-bovis L550, L550

+ Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130

+ Leptospira interrogans serovar lai str. 56601

+ Treponema denticola ATCC 35405

+ Treponema pallidum

+ Treponema pallidum subsp. pallidum SS14, SS14

+ COG functional categories

+ (Clickable) linear whole genome views

+ Horizontal gene transfer (predicted by SIGI-HMM)

+ Sequence retrieval

+ Advanced search

+ Sequence similarity search

+ Best bidirectional hits (protein-based analysis)

+ Gene core sets (protein-based analysis)

+ Gene partnerships (DNA-based analysis)

+ Protein variations (protein-based analysis)

+ Synteny analysis (protein-based analysis)

+ Gene conservation (protein-based analysis)

+ Codon and amino acid usages (DNA- and protein-based analysis)

+ Alignments of whole reference and target genomic elements (DNA-based analysis)

Gene list

Applied filters:

COG category: Coenzyme transport and metabolism
Organism: Borrelia duttonii Ly, Ly

Number of genes found: 15

Free access


Show UniProt / TrEMBL protein name		View in Fasta format (DNA)		View in Fasta format (Protein)

Borrelia duttonii Ly, Ly

Name	Locus tag	Product / Description	Genomic element	Type	Begin	Length	Strand	GC-content
NA	BDU_639	nicotinate phosphoribosyltransferase	chromosome	CDS	684011	1476	-	0.26626
NA	BDU_522	NH(3)-dependent NAD synthetase	chromosome	CDS	545660	1569	+	0.289356
NA	BDU_339	uncharacterized conserved protein	chromosome	CDS	361737	786	-	0.264631
NA	BDU_14004	uncharacterized conserved protein	pl23b	CDS	4733	1080	-	0.233333
NA	BDU_659	HemN-related protein	chromosome	CDS	707215	1140	+	0.257018
coaE	BDU_549	dephospho-CoA kinase	chromosome	CDS	572749	597	-	0.217755
dfp	BDU_820	pantothenate metabolism flavoprotein	chromosome	CDS	876399	1263	-	0.261283
folD	BDU_31	methylenetetrahydrofolate dehydrogenase	chromosome	CDS	35563	942	-	0.309979
ispB	BDU_317	octaprenyl-diphosphate synthase	chromosome	CDS	335857	1047	+	0.25979
kdtB	BDU_704	pantetheine-phosphate adenylyltransferase	chromosome	CDS	751899	498	+	0.257028
metK	BDU_371	S-adenosylmethionine synthetase	chromosome	CDS	399436	1170	+	0.302564
nadD	BDU_787	nicotinate-nucleotide adenylyltransferase	chromosome	CDS	836043	576	+	0.284722
panF_1	BDU_821	pantothenate permease	chromosome	CDS	877817	1422	+	0.265823
panF_2	BDU_826	pantothenate permease	chromosome	CDS	882877	1422	+	0.265823
pdxK	BDU_772	pyridoxal kinase	chromosome	CDS	825069	795	-	0.254088