Gene list
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COG category: Translation, ribosomal structure and biogenesis
Organism: Treponema pallidum
Number of genes found: 121
Show UniProt / TrEMBL protein name | View in Fasta format (DNA) | View in Fasta format (Protein) | ||||
Treponema pallidum | ||||||||
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Name | Locus tag | Product / Description | Genomic element | Type | Begin | Length | Strand | GC-content |
TP0015 | phenylalanyl-tRNA synthetase beta subunit (pheT) | chromosome | CDS | 13966 | 1815 | + | 0.500826 | |
TP0051 | peptide chain release factor 1 (prfA) | chromosome | CDS | 59578 | 1056 | + | 0.497159 | |
TP0052 | protoporphyrinogen oxidase (hemK) | chromosome | CDS | 60603 | 1047 | + | 0.552054 | |
TP0054 | conserved hypothetical protein | chromosome | CDS | 62964 | 960 | + | 0.53125 | |
TP0060 | ribosomal protein L9 (rplI) | chromosome | CDS | 69173 | 471 | - | 0.47983 | |
TP0061 | ribosomal protein S18 (rpsR) | chromosome | CDS | 69749 | 300 | - | 0.513333 | |
TP0063 | ribosomal protein S6 (rpsF) | chromosome | CDS | 70704 | 282 | - | 0.535461 | |
TP0091 | cysteinyl-tRNA synthetase (cysS) | chromosome | CDS | 99989 | 1563 | + | 0.545106 | |
TP0097 | translation initiation factor 1 (infA) | chromosome | CDS | 106441 | 219 | + | 0.547945 | |
TP0109 | rRNA methylase, putative | chromosome | CDS | 123762 | 879 | - | 0.552901 | |
TP0124 | conserved hypothetical GTP-binding protein | chromosome | CDS | 145571 | 1107 | + | 0.525745 | |
TP0154 | conserved hypothetical protein | chromosome | CDS | 176086 | 1038 | + | 0.585742 | |
TP0160 | prolyl-tRNA synthetase (proS) | chromosome | CDS | 181419 | 1854 | - | 0.559871 | |
TP0182 | conserved hypothetical protein | chromosome | CDS | 198891 | 780 | + | 0.602564 | |
TP0187 | translation elongation factor TU (tuf) | chromosome | CDS | 203082 | 1488 | + | 0.518817 | |
TP0188 | ribosomal protein S10 (rpsJ) | chromosome | CDS | 204641 | 309 | + | 0.527508 | |
TP0189 | ribosomal protein L3 (rplC) | chromosome | CDS | 204996 | 627 | + | 0.54067 | |
TP0190 | ribosomal protein L4 (rplD) | chromosome | CDS | 205636 | 651 | + | 0.493088 | |
TP0191 | ribosomal protein L23 (rplW) | chromosome | CDS | 206273 | 285 | + | 0.522807 | |
TP0192 | ribosomal protein L2 (rplB) | chromosome | CDS | 206613 | 822 | + | 0.562044 | |
TP0193 | ribosomal protein S19 (rpsS) | chromosome | CDS | 207444 | 288 | + | 0.472222 | |
TP0194 | ribosomal protein L22 (rplV) | chromosome | CDS | 207740 | 375 | + | 0.528 | |
TP0195 | ribosomal protein S3 (rpsC) | chromosome | CDS | 208098 | 744 | + | 0.513441 | |
TP0196 | ribosomal protein L16 (rplP) | chromosome | CDS | 208845 | 420 | + | 0.528571 | |
TP0197 | ribosomal protein L29 (rpmC) | chromosome | CDS | 209279 | 219 | + | 0.452055 | |
TP0198 | ribosomal protein S17 (rpsQ) | chromosome | CDS | 209512 | 255 | + | 0.529412 | |
TP0199 | ribosomal protein L14 (rplN) | chromosome | CDS | 209779 | 369 | + | 0.485095 | |
TP0200 | ribosomal protein L24 (rplX) | chromosome | CDS | 210159 | 312 | + | 0.50641 | |
TP0201 | ribosomal protein L5 (rplE) | chromosome | CDS | 210467 | 558 | + | 0.464158 | |
TP0202 | ribosomal protein S14 (rpsN) | chromosome | CDS | 211036 | 186 | + | 0.537634 | |
TP0203 | ribosomal protein S8 (rpsH) | chromosome | CDS | 211237 | 399 | + | 0.491228 | |
TP0204 | ribosomal protein L6 (rplF) | chromosome | CDS | 211645 | 540 | + | 0.518519 | |
TP0205 | ribosomal protein L18 (rplR) | chromosome | CDS | 212193 | 363 | + | 0.498623 | |
TP0206 | ribosomal protein S5 (rpsE) | chromosome | CDS | 212564 | 519 | + | 0.518304 | |
TP0207 | ribosomal protein L15 (rplO) | chromosome | CDS | 213270 | 462 | + | 0.5671 | |
TP0209 | ribosomal protein L36 (rpmJ-1) | chromosome | CDS | 215096 | 114 | + | 0.403509 | |
TP0210 | ribosomal protein S13 (rpsM) | chromosome | CDS | 215225 | 366 | + | 0.469945 | |
TP0211 | ribosomal protein S11 (rpsK) | chromosome | CDS | 215608 | 381 | + | 0.52231 | |
TP0213 | ribosomal protein L17 (rplQ) | chromosome | CDS | 217048 | 495 | + | 0.523232 | |
TP0222 | T. pallidum predicted coding region TP0222 | chromosome | CDS | 226969 | 447 | + | 0.525727 | |
TP0231 | conserved hypothetical protein | chromosome | CDS | 240313 | 651 | + | 0.549923 | |
TP0234 | ribosomal protein L33 (rpmG) | chromosome | CDS | 241990 | 171 | + | 0.497076 | |
TP0237 | ribosomal protein L11 (rplK) | chromosome | CDS | 243163 | 441 | + | 0.54195 | |
TP0238 | ribosomal protein L1 (rplA) | chromosome | CDS | 243600 | 681 | + | 0.537445 | |
TP0239 | ribosomal protein L10 (rplJ) | chromosome | CDS | 244282 | 543 | + | 0.546961 | |
TP0240 | ribosomal protein L7/L12 (rplL) | chromosome | CDS | 244933 | 390 | + | 0.520513 | |
TP0243 | ribosomal protein S12 (rpsL) | chromosome | CDS | 253487 | 375 | + | 0.544 | |
TP0244 | ribosomal protein S7 | chromosome | CDS | 253883 | 471 | + | 0.549894 | |
TP0255 | ribosomal protein L31 (rpmE) | chromosome | CDS | 267195 | 204 | + | 0.490196 | |
TP0269 | conserved hypothetical protein | chromosome | CDS | 284582 | 1449 | + | 0.503796 | |
TP0270 | polynucleotide adenylyltransferase (pcnA) | chromosome | CDS | 286104 | 1437 | + | 0.548365 | |
TP0279 | ribosomal protein S1 (rpsA) | chromosome | CDS | 294243 | 2592 | + | 0.552469 | |
TP0306 | ribosomal protein S4 | chromosome | CDS | 322870 | 615 | + | 0.536585 | |
TP0337 | dimethyladenosine transferase (ksgA) | chromosome | CDS | 359654 | 858 | + | 0.480186 | |
TP0339 | conserved hypothetical protein | chromosome | CDS | 361029 | 996 | + | 0.483936 | |
TP0362 | ribosomal protein L28 (rpmB) | chromosome | CDS | 383850 | 237 | + | 0.599156 | |
TP0372 | general stress protein (ctc) | chromosome | CDS | 395776 | 591 | + | 0.558376 | |
TP0450 | translation elongation factor G (fusA-1) | chromosome | CDS | 476354 | 2052 | + | 0.494152 | |
TP0452 | isoleucyl-tRNA synthetase (ileS) | chromosome | CDS | 478855 | 3276 | + | 0.4884 | |
TP0459 | conserved hypothetical protein | chromosome | CDS | 488940 | 786 | + | 0.596692 | |
TP0525 | translation elongation factor P (efp) | chromosome | CDS | 567433 | 564 | + | 0.498227 | |
TP0576 | peptide chain release factor 2 (prfB) | chromosome | CDS | 625802 | 1107 | + | 0.560072 | |
TP0586 | leucyl-tRNA synthetase (leuS) | chromosome | CDS | 636980 | 2637 | + | 0.535457 | |
TP0596 | polynucleotide adenylyltransferase (pcnB) | chromosome | CDS | 647592 | 1113 | - | 0.563342 | |
TP0604 | ribosome recycling factor | chromosome | CDS | 655599 | 552 | - | 0.528986 | |
TP0605 | translation elongation factor TS (tsf) | chromosome | CDS | 656254 | 873 | - | 0.558992 | |
TP0606 | ribosomal protein S2 (rpsB) | chromosome | CDS | 657217 | 876 | - | 0.5 | |
TP0609 | asparaginyl-tRNA synthetase (asnS) | chromosome | CDS | 659665 | 1572 | + | 0.592875 | |
TP0632 | tryptophanyl-tRNA synthetase (trsA) | chromosome | CDS | 690233 | 1014 | + | 0.566075 | |
TP0637 | tRNA delta(2)-isopentenylpyrophosphate transferase (miaA) | chromosome | CDS | 695695 | 951 | - | 0.526814 | |
TP0641 | histidyl-tRNA synthetase (hisS) | chromosome | CDS | 701573 | 1329 | - | 0.498871 | |
TP0644 | lysyl-tRNA synthetase (lysS-1) | chromosome | CDS | 705443 | 1587 | - | 0.47448 | |
TP0647 | seryl-tRNA synthetase (serS) | chromosome | CDS | 708529 | 1281 | - | 0.494145 | |
TP0661 | T. pallidum predicted coding region TP0661 | chromosome | CDS | 723648 | 513 | - | 0.553606 | |
TP0667 | uridine kinase (udk) | chromosome | CDS | 728105 | 1668 | - | 0.502398 | |
TP0672 | glycyl-tRNA synthetase (glyS) | chromosome | CDS | 736531 | 1389 | - | 0.519078 | |
TP0673 | glutamyl-tRNA synthetase (gltX) | chromosome | CDS | 738054 | 1614 | - | 0.563197 | |
TP0682 | cell division protein (ftsJ) | chromosome | CDS | 746180 | 603 | - | 0.570481 | |
TP0743 | ribosomal protein L27 (rpl27) | chromosome | CDS | 808013 | 264 | - | 0.541667 | |
TP0744 | conserved hypothetical protein | chromosome | CDS | 808307 | 327 | - | 0.568807 | |
TP0745 | ribosomal protein L21 (rplU) | chromosome | CDS | 808646 | 318 | - | 0.518868 | |
TP0754 | conserved hypothetical protein | chromosome | CDS | 818176 | 1371 | - | 0.487965 | |
TP0756 | methionyl-tRNA formyltransferase (fmt) | chromosome | CDS | 820330 | 960 | - | 0.553125 | |
TP0757 | polypeptide deformylase (def) | chromosome | CDS | 821293 | 489 | - | 0.554192 | |
TP0758 | ribosomal protein S21 (rpsU) | chromosome | CDS | 821822 | 210 | - | 0.485714 | |
TP0767 | translation elongation factor G (fusA-2) | chromosome | CDS | 831696 | 2088 | + | 0.529693 | |
TP0770 | ATP-dependent RNA helicase | chromosome | CDS | 835978 | 1950 | + | 0.534872 | |
TP0807 | ribosomal protein L32 (rpmF) | chromosome | CDS | 877383 | 189 | + | 0.550265 | |
TP0830 | pseudouridylate synthase (hisT) | chromosome | CDS | 896627 | 843 | + | 0.508897 | |
TP0831 | arginyl-tRNA synthetase (argS) | chromosome | CDS | 897479 | 1770 | - | 0.501695 | |
TP0834 | tyrosyl-tRNA synthetase (tyrS) | chromosome | CDS | 900932 | 1251 | - | 0.518785 | |
TP0837 | threonyl-tRNA synthetase (thrS) | chromosome | CDS | 906186 | 1779 | + | 0.578977 | |
TP0842 | methionine aminopeptidase (map) | chromosome | CDS | 914944 | 768 | - | 0.550781 | |
TP0848 | ribosomal protein L20 (rplT) | chromosome | CDS | 919085 | 369 | - | 0.523035 | |
TP0849 | ribosomal protein L35 (rpmI) | chromosome | CDS | 919486 | 201 | - | 0.452736 | |
TP0850 | translation initiation factor 3 (infC) | chromosome | CDS | 919739 | 540 | - | 0.514815 | |
TP0886 | polyribonucleotide nucleotidyltransferase (pnp) | chromosome | CDS | 962942 | 2109 | - | 0.535325 | |
TP0887 | ribosomal protein S15 (rpsO) | chromosome | CDS | 965198 | 270 | - | 0.533333 | |
TP0889 | tRNA pseudouridine 55 synthase (truB) | chromosome | CDS | 966314 | 1101 | - | 0.564033 | |
TP0890 | ribosome-binding factor A (rbfA) | chromosome | CDS | 967392 | 381 | - | 0.490814 | |
TP0891 | translation initiation factor 2 (infB) | chromosome | CDS | 967769 | 2529 | - | 0.528667 | |
TP0905 | ribosomal protein S16 (rpsP) | chromosome | CDS | 986685 | 372 | + | 0.599462 | |
TP0907 | conserved hypothetical protein | chromosome | CDS | 987370 | 525 | + | 0.571429 | |
TP0908 | tRNA (guanine-N1)-methyltransferase (trmD) | chromosome | CDS | 987891 | 753 | + | 0.556441 | |
TP0909 | ribosomal protein L19 (rplS) | chromosome | CDS | 988615 | 372 | + | 0.521505 | |
TP0927 | T. pallidum predicted coding region TP0927 | chromosome | CDS | 1007920 | 591 | + | 0.527919 | |
TP0950 | T. pallidum predicted coding region TP0950 | chromosome | CDS | 1032177 | 285 | - | 0.557895 | |
TP0951 | ribosomal protein L34 (rpmH) | chromosome | CDS | 1032465 | 156 | - | 0.596154 | |
TP0973 | phenylalanyl-tRNA synthetase alpha subunit (pheS) | chromosome | CDS | 1056337 | 1662 | + | 0.577617 | |
TP0980 | histidine phosphokinase/phophatase (ntrB) | chromosome | CDS | 1063022 | 1023 | + | 0.545455 | |
TP0985 | aspartyl-tRNA synthetase (aspS) | chromosome | CDS | 1068702 | 1809 | + | 0.542841 | |
TP1011 | peptidyl-tRNA hydrolase (pth) | chromosome | CDS | 1102397 | 609 | - | 0.502463 | |
TP1017 | alanyl-tRNA synthetase (alaS) | chromosome | CDS | 1107937 | 1818 | - | 0.545105 | |
TP1019 | glu-tRNA amidotransferase, subunit C (gatC) | chromosome | CDS | 1111462 | 444 | + | 0.540541 | |
TP1020 | glu-tRNA amidotransferase, subunit A (gatA) | chromosome | CDS | 1111906 | 1521 | + | 0.55687 | |
TP1021 | glu-tRNA amidotransferase, subunit B (gatB) | chromosome | CDS | 1113419 | 1530 | + | 0.521569 | |
TP1024 | ribosomal protein S9 (rpsI) | chromosome | CDS | 1117080 | 390 | - | 0.579487 | |
TP1025 | ribosomal protein L13 (rplM) | chromosome | CDS | 1117485 | 429 | - | 0.566434 | |
TP1029 | T. pallidum predicted coding region TP1029 | chromosome | CDS | 1123124 | 687 | - | 0.614265 | |
TP1035 | valyl-tRNA synthetase (valS) | chromosome | CDS | 1128443 | 2871 | - | 0.53605 | |
TP1040 | lysyl-tRNA synthetase (lysS-2) | chromosome | CDS | 1136164 | 1056 | - | 0.52178 |