TitleGenColors Logo
spacer
Home spacerGenomes
spacerMethods
spacerDocumentation spacerExternal links spacerContactspacer spacerLeibniz FLI
spacer
QuickSearch
2024-05-11 21:19:20

Gene list

Applied filters:

COG category: Translation, ribosomal structure and biogenesis
Organism: Leptospira biflexa serovar Patoc strain Patoc 1 (Ames), Patoc 1 (Ames)

Number of genes found: 151

Free access
Sort by:

 

Show UniProt / TrEMBL protein name View in Fasta format (DNA) View in Fasta format (Protein)  

 
Leptospira biflexa serovar Patoc strain Patoc 1 (Ames), Patoc 1 (Ames)
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
NA LBF_1981 Acetyltransferasechromosome I CDS2121030 552 - 0.32971
NA LBF_2751 Poly A polymerase family of proteinchromosome I CDS2948094 1293 + 0.335654
NA LBF_2174 Hypothetical proteinchromosome I CDS2322690 249 + 0.273092
NA LBF_1332 tRNA nucleotidyltransferasechromosome I CDS1447970 1479 + 0.401623
NA LBF_2082 Superfamily II DNA and RNA helicasechromosome I CDS2233540 1590 - 0.433962
NA LBF_0096 Pseudouridylate synthasechromosome I CDS100958 714 - 0.368347
NA LBF_0075 Nucleoside-diphosphate-sugar pyrophosphorylasechromosome I CDS79584 723 - 0.348548
NA LBF_3344 Cytosine/adenosine deaminasechromosome I CDS3587305 441 + 0.385488
NA LBF_2091 Sigma 54 modulation protein / S30EA ribosomal proteinchromosome I CDS2242523 288 + 0.368056
NA LBF_2059 Pseudouridylate synthasechromosome I CDS2212409 669 - 0.38864
NA LBF_0748 Ribonuclease D-relatedchromosome I CDS796237 639 + 0.380282
NA LBF_2277 Peptidyl-tRNA hydrolasechromosome I CDS2423545 396 - 0.439394
NA LBF_1786 Translation factor, SUA5 familychromosome I CDS1936006 1017 - 0.428712
NA LBF_0499 Glucose-1-phosphate thymidylyltransferasechromosome I CDS522735 1032 + 0.359496
NA LBF_1992 rRNA methylasechromosome I CDS2131528 858 - 0.404429
NA LBF_1677 Amidasechromosome I CDS1808363 1467 - 0.371506
NA LBF_2660 Hypothetical proteinchromosome I CDS2844021 921 + 0.361564
NA LBF_1882 histidine biosynthesis proteinchromosome I CDS2027892 1026 - 0.365497
NA LBF_0402 Hypothetical proteinchromosome I CDS418138 678 - 0.339233
NA LBF_0019 Translation factor, SUA5 familychromosome I CDS20499 633 + 0.347551
NA LBF_1006 rRNA methylasechromosome I CDS1085850 834 - 0.413669
NA LBF_1969 Acetyltransferasechromosome I CDS2109946 546 - 0.336996
NA LBF_1112 Protein-synthesizing GTPase complex, EF-G componentchromosome I CDS1204930 2121 - 0.451202
NA LBF_0342 Hypothetical proteinchromosome I CDS358250 351 + 0.401709
NA LBF_0082 rRNA methylase/Hemolysin-tylAchromosome I CDS86115 774 - 0.382429
NA LBF_2734 Superfamily II DNA and RNA helicasechromosome I CDS2927765 1416 - 0.410311
NA LBF_1546 Hypothetical proteinchromosome I CDS1679161 834 - 0.351319
NA LBF_1290 Pseudouridylate synthasechromosome I CDS1403877 963 + 0.387331
NA LBF_2827 Translation initiation factor 2Bchromosome I CDS3032006 1074 - 0.417132
NA LBF_4194 Translation elongation factor Pchromosome II CDS203455 567 - 0.405644
NA LBF_1916 Protein-synthesizing GTPase complex, EF-G componentchromosome I CDS2048677 1932 - 0.445652
NA LBF_3282 Conserved hypothetical proteinchromosome I CDS3527407 381 - 0.354331
NA LBF_4222 tRNA synthetase class II (D, K and N)chromosome II CDS229262 972 - 0.415638
NA LBF_2344 SAM-dependent methyltransferasechromosome I CDS2492616 1320 + 0.390152
NA LBF_1975 Methionyl-tRNA formyltransferasechromosome I CDS2115549 681 - 0.389134
alaS LBF_1337 Alanine--tRNA ligasechromosome I CDS1452759 2760 + 0.407246
argS LBF_2035 Arginine--tRNA ligasechromosome I CDS2188647 1785 - 0.366387
asnS LBF_1669 Asparagine--tRNA ligasechromosome I CDS1799363 1305 - 0.445977
aspS LBF_2041 Aspartate--tRNA ligasechromosome I CDS2195268 1806 - 0.430233
cspR LBF_0812 rRNA methylasechromosome I CDS861757 468 + 0.452991
cysS LBF_1672 Cysteine--tRNA ligasechromosome I CDS1802547 1458 + 0.355967
def LBF_1521 N-formylmethionyl-tRNA deformylasechromosome I CDS1649877 540 - 0.42037
fmt LBF_1607 Methionyl-tRNA formyltransferasechromosome I CDS1739073 969 + 0.460268
frr LBF_2534 Ribosome recycling factorchromosome I CDS2713582 552 - 0.393116
gatB LBF_2841 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit Bchromosome I CDS3047961 1464 - 0.394809
gatC LBF_1678 Asp-tRNAAsn/Glu-tRNAGln amidotransferase subunit Cchromosome I CDS1809826 285 - 0.305263
glnS LBF_0654 Bifunctional glutamate--tRNA ligase/glutamine-- tRNA ligasechromosome I CDS687866 1554 - 0.428571
glyRS LBF_0857 Glycine--tRNA ligasechromosome I CDS916165 1401 - 0.432548
hemK LBF_1106 Methylase of polypeptide chain release factorschromosome I CDS1200258 888 - 0.404279
hisS LBF_3124 Histidine--tRNA ligasechromosome I CDS3357115 1314 - 0.372146
ileS LBF_2221 Isoleucine--tRNA ligasechromosome I CDS2362807 2748 + 0.409389
infA LBF_1891 Translation initiation factor 1, IF-1chromosome I CDS2036078 219 - 0.429224
infB LBF_1472 Translation initiation factor 2 (IF-2; GTPase)chromosome I CDS1595071 2754 + 0.479303
infC LBF_2331 Translation initiation factor 3 (IF-3)chromosome I CDS2475711 564 - 0.432624
ksgA LBF_1085 Dimethyladenosine transferasechromosome I CDS1179229 879 - 0.410694
leuS LBF_0255 Leucine--tRNA ligasechromosome I CDS259530 2604 - 0.432028
lysU LBF_1842 Lysine--tRNA ligasechromosome I CDS1994904 1494 + 0.422356
map LBF_2628 Methionyl aminopeptidasechromosome I CDS2816538 756 + 0.453704
map-1 LBF_0331 Methionyl aminopeptidasechromosome I CDS348120 756 + 0.421958
metG LBF_3193 Methionine--tRNA ligasechromosome I CDS3427815 2046 - 0.391496
miaA LBF_0460 tRNA isopentenyltransferasechromosome I CDS479011 891 + 0.43771
miaB-1 LBF_1762 2-methylthioadenine synthetasechromosome I CDS1901740 1377 - 0.378359
miaB-2 LBF_1342 2-methylthioadenine synthetasechromosome I CDS1460976 1347 + 0.411284
miaB-3 LBF_2491 2-methylthioadenine synthetasechromosome I CDS2664939 1290 - 0.389922
pheS LBF_0490 Phenylalanine-tRNA synthetase alpha subunitchromosome I CDS514031 1026 + 0.434698
pheT LBF_0297 Phenylalanine--tRNA ligase beta subunitchromosome I CDS306620 2400 - 0.389583
pnp LBF_1476 Polyribonucleotide nucleotidyltransferasechromosome I CDS1599581 2091 + 0.435677
prfA LBF_3169 Peptide chain release factor 1chromosome I CDS3402761 1062 - 0.422787
prfB LBF_0246 Peptide chain release factor 2chromosome I CDS247982 1128 + 0.387411
prfC LBF_1753 Peptide chain release factor 3chromosome I CDS1891179 1590 - 0.406289
prmA LBF_1079 Ribosomal protein L11 methylasechromosome I CDS1173762 927 - 0.366775
proS LBF_2529 Prolyl-tRNA ligasechromosome I CDS2707252 1761 - 0.417944
pth-1 LBF_1238 Peptidyl -tRNA hydrolasechromosome I CDS1353893 567 + 0.430335
pth-2 LBF_0227 Aminoacyl-tRNA hydrolasechromosome I CDS229922 564 - 0.406028
queA LBF_4240 S-adenosylmethionine:tRNA-ribosyltransferase- isomerase (queuosine synthetase)chromosome II CDS242055 1041 - 0.398655
rbfA LBF_1473 Ribosome-binding factor Achromosome I CDS1597835 450 + 0.408889
rimM LBF_1612 RimM protein, required for 16S rRNA processingchromosome I CDS1742254 537 + 0.439479
rluA LBF_3041 Pseudouridylate synthase, 23S RNA-specificchromosome I CDS3272462 939 + 0.460064
rnd LBF_0167 Ribonuclease IIIchromosome I CDS170889 1221 - 0.386568
rplA LBF_1923 50S Ribosomal protein L1chromosome I CDS2060782 693 - 0.441558
rplB LBF_1910 50S Ribosomal protein L2chromosome I CDS2044678 837 - 0.434886
rplC LBF_1913 50S Ribosomal protein L3chromosome I CDS2046474 624 - 0.447115
rplD LBF_1912 50S Ribosomal protein L4chromosome I CDS2045827 636 - 0.421384
rplE LBF_1901 50S Ribosomal protein L5chromosome I CDS2041040 552 - 0.427536
rplF LBF_1898 50S Ribosomal protein L6chromosome I CDS2039874 540 - 0.45
rplI LBF_2043 50S Ribosomal protein L9chromosome I CDS2198451 447 - 0.409396
rplJ LBF_1922 50S Ribosomal protein L10chromosome I CDS2060236 534 - 0.432584
rplK LBF_1924 50S Ribosomal protein L11chromosome I CDS2061500 426 - 0.443662
rplL LBF_1921 50S Ribosomal protein L7/L12chromosome I CDS2059817 384 - 0.463542
rplM LBF_1334 50S Ribosomal protein L13chromosome I CDS1450590 453 + 0.437086
rplN LBF_1903 50S Ribosomal protein L14chromosome I CDS2041979 393 - 0.442748
rplO LBF_1894 50S Ribosomal protein L15chromosome I CDS2038260 534 - 0.449438
rplP LBF_1906 50S Ribosomal protein L16chromosome I CDS2042910 414 - 0.439614
rplQ LBF_1885 50S Ribosomal protein L17chromosome I CDS2032981 519 - 0.381503
rplR LBF_1897 50S Ribosomal protein L18chromosome I CDS2039499 369 - 0.441734
rplS LBF_1614 50S Ribosomal protein L19chromosome I CDS1743442 429 + 0.41958
rplT LBF_2329 50S Ribosomal protein L20chromosome I CDS2475145 354 - 0.420904
rplU LBF_1720 50S Ribosomal protein L21chromosome I CDS1858282 309 + 0.414239
rplV LBF_1908 50S Ribosomal protein L22chromosome I CDS2044027 351 - 0.413105
rplW LBF_1911 50S Ribosomal protein L23chromosome I CDS2045517 306 - 0.398693
rplX LBF_1902 50S Ribosomal protein L24chromosome I CDS2041594 384 - 0.416667
rplY LBF_0228 50S Ribosomal protein L25chromosome I CDS230505 636 - 0.433962
rpmA LBF_1722 50S Ribosomal protein L27chromosome I CDS1858924 258 + 0.422481
rpmB LBF_0986 50S Ribosomal protein L28chromosome I CDS1069963 291 + 0.436426
rpmC LBF_1905 50S Ribosomal protein L29chromosome I CDS2042641 273 - 0.399267
rpmD LBF_1895 50S Ribosomal protein L30chromosome I CDS2038798 180 - 0.372222
rpmE LBF_0999 50S Ribosomal protein L31chromosome I CDS1080688 201 + 0.41791
rpmI LBF_2330 50S Ribosomal protein L35chromosome I CDS2475502 201 - 0.393035
rpmJ LBF_1890 50S ribosomal protein L36chromosome I CDS2035955 114 - 0.394737
rpsA-1 LBF_0811 30S Ribosomal protein S1chromosome I CDS860592 1158 + 0.379102
rpsA-2 LBF_2515 30S Ribosomal protein S1chromosome I CDS2689518 1701 - 0.423868
rpsB LBF_2537 30S Ribosomal protein S2chromosome I CDS2715455 903 - 0.398671
rpsC LBF_1907 30S Ribosomal protein S3chromosome I CDS2043346 678 - 0.414454
rpsD LBF_1887 30S Ribosomal protein S4chromosome I CDS2034504 633 - 0.396524
rpsE LBF_1896 30S Ribosomal protein S5chromosome I CDS2038992 507 - 0.435897
rpsF LBF_2046 30S Ribosomal protein S6chromosome I CDS2199699 276 - 0.40942
rpsG LBF_1917 30S Ribosomal protein S7chromosome I CDS2050679 474 - 0.43038
rpsH LBF_1899 30S Ribosomal protein S8chromosome I CDS2040428 399 - 0.408521
rpsI LBF_1335 30S Ribosomal protein S9chromosome I CDS1451044 396 + 0.449495
rpsJ LBF_1914 30S Ribosomal protein S10chromosome I CDS2047109 309 - 0.417476
rpsK LBF_1888 30S Ribosomal protein S11chromosome I CDS2035146 414 - 0.425121
rpsL LBF_1918 30S Ribosomal protein S12chromosome I CDS2051167 375 - 0.472
rpsM LBF_1889 30S Ribosomal protein S13chromosome I CDS2035571 378 - 0.439153
rpsN LBF_1900 30S Ribosomal protein S14chromosome I CDS2040844 186 - 0.483871
rpsO LBF_1475 30S Ribosomal protein S15chromosome I CDS1599309 267 + 0.397004
rpsP LBF_1610 30S Ribosomal protein S16chromosome I CDS1741718 309 + 0.414239
rpsQ LBF_1904 30S Ribosomal protein S17chromosome I CDS2042368 270 - 0.385185
rpsR LBF_2044 30S Ribosomal protein S18chromosome I CDS2198906 285 - 0.403509
rpsS LBF_1909 30S Ribosomal protein S19chromosome I CDS2044386 279 - 0.387097
rpsT LBF_0495 30S Ribosomal protein S20chromosome I CDS518977 276 + 0.405797
rpsU LBF_1512 30S Ribosomal protein S21chromosome I CDS1636731 219 + 0.378995
rsuA LBF_1410 Pseudouridylate synthasechromosome I CDS1530781 744 + 0.376344
rsuA-1 LBF_2206 Pseudouridylate synthasechromosome I CDS2344743 732 - 0.35929
serS LBF_3352 Serine--tRNA ligasechromosome I CDS3594575 1257 - 0.405728
spoU LBF_5046 tRNA (guanosine-2'-O-)-methyltransferasep74 CDS61258 786 + 0.419847
spoU LBF_1673 tRNA (guanosine-2'-O-)-methyltransferasechromosome I CDS1803986 774 + 0.379845
srmB LBF_4201 ATP-dependent RNA helicase (superfamily II)chromosome II CDS209180 1590 + 0.438365
tdcF LBF_1796 Bifunctional translation initiation inhibitor, yjgF family endoribonuclease L-PSPchromosome I CDS1945730 459 + 0.446623
tgt LBF_2262 Queuine tRNA-ribosyltransferasechromosome I CDS2405832 1116 - 0.419355
thrS LBF_2333 Threonine--tRNA ligasechromosome I CDS2477297 1917 - 0.420449
trmA-1 LBF_3339 tRNA (uracil-5-)-methyltransferasechromosome I CDS3585438 1152 - 0.380208
trmA-2 LBF_0091 tRNA (uracil-5-)-methyltransferasechromosome I CDS95412 1200 - 0.4075
trmD LBF_1613 tRNA (guanine-N(1)-)-methyltransferasechromosome I CDS1742780 654 + 0.460245
trmU LBF_1287 tRNA (5-methylaminomethyl-2-thiouridylate)- methyltransferasechromosome I CDS1399220 1143 + 0.425197
trpS LBF_1087 Tryptophan--tRNA ligasechromosome I CDS1181933 969 - 0.384933
truA LBF_0530 Pseudouridylate synthasechromosome I CDS553189 795 - 0.445283
truB LBF_1474 Pseudouridylate synthase, N-terminal subunitchromosome I CDS1598353 930 + 0.469892
tsf LBF_2536 Translation elongation factor Tschromosome I CDS2714859 597 - 0.437186
tufB LBF_1915 Protein-synthesizing GTPase complex, EF-Tu componentchromosome I CDS2047422 1206 - 0.427032
tyrS LBF_1518 Tyrosine--tRNA ligasechromosome I CDS1644024 1227 + 0.436838
valS LBF_0243 Valine--tRNA ligasechromosome I CDS243167 2691 + 0.389818