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2024-05-12 05:43:27

Gene list

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COG category: Translation, ribosomal structure and biogenesis
Organism: Treponema pallidum subsp. pallidum SS14, SS14

Number of genes found: 122

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Treponema pallidum subsp. pallidum SS14, SS14
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
NA TPASS_0604 ribosome recycling factorchromosome CDS657053 552 - 0.528986
NA TPASS_0124 possible GTP-binding proteinchromosome CDS145568 1107 + 0.525745
NA TPASS_0907 hypothetical proteinchromosome CDS988815 525 + 0.571429
NA TPASS_0109 possible rRNA methylasechromosome CDS123759 879 - 0.552901
NA TPASS_0339 hypothetical proteinchromosome CDS362209 996 + 0.483936
NA TPASS_1029 hypothetical proteinchromosome CDS1124569 687 - 0.612809
NA TPASS_0744 hypothetical proteinchromosome CDS809755 327 - 0.568807
NA TPASS_0754 hypothetical proteinchromosome CDS819624 1371 - 0.487965
NA TPASS_0927 hypothetical proteinchromosome CDS1009365 591 + 0.527919
NA TPASS_0222 hypothetical proteinchromosome CDS228152 447 + 0.525727
NA TPASS_0661 hypothetical proteinchromosome CDS725102 513 - 0.553606
NA TPASS_0231 hypothetical proteinchromosome CDS241496 651 + 0.549923
NA TPASS_0459 hypothetical proteinchromosome CDS490539 786 + 0.596692
NA TPASS_0950 hypothetical proteinchromosome CDS1033622 285 - 0.557895
NA TPASS_0182 hypothetical proteinchromosome CDS200074 780 + 0.602564
NA TPASS_0269 hypothetical proteinchromosome CDS285765 1449 + 0.503796
NA TPASS_0154 hypothetical proteinchromosome CDS177269 1038 + 0.585742
NA TPASS_0054 hypothetical proteinchromosome CDS62961 960 + 0.53125
NA TPASS_0770 ATP-dependent RNA helicasechromosome CDS837426 1950 + 0.535385
alaS TPASS_1017 alanyl-tRNA synthetasechromosome CDS1109382 1818 - 0.545105
argS TPASS_0831 arginyl-tRNA synthetasechromosome CDS898927 1770 - 0.501695
asnS TPASS_0609 asparaginyl-tRNA synthetasechromosome CDS661119 1572 + 0.592875
aspS TPASS_0985 aspartyl-tRNA synthetasechromosome CDS1070147 1809 + 0.542841
ctc TPASS_0372 general stress proteinchromosome CDS396956 591 + 0.558376
cysS TPASS_0091 cysteinyl-tRNA synthetasechromosome CDS99986 1563 + 0.545106
def TPASS_0757 polypeptide deformylasechromosome CDS822741 489 - 0.554192
efp TPASS_0525 translation elongation factor Pchromosome CDS568865 564 + 0.498227
fmt TPASS_0756 methionyl-tRNA formyltransferasechromosome CDS821778 960 - 0.554167
ftsJ TPASS_0682 cell division proteinchromosome CDS747628 603 - 0.570481
fusA1 TPASS_0450 translation elongation factor Gchromosome CDS477953 2052 + 0.494152
fusA2 TPASS_0767 translation elongation factor Gchromosome CDS833144 2088 + 0.529693
gatA TPASS_1020 glu-tRNA amidotransferase, subunit Achromosome CDS1113351 1521 + 0.55687
gatB TPASS_1021 glu-tRNA amidotransferase, subunit Bchromosome CDS1114864 1530 + 0.521569
gatC TPASS_1019 glu-tRNA amidotransferase, subunit Cchromosome CDS1112907 444 + 0.540541
gltX TPASS_0673 glutamyl-tRNA synthetasechromosome CDS739502 1614 - 0.563197
glyS TPASS_0672 glycyl-tRNA synthetasechromosome CDS737979 1389 - 0.519078
hemK TPASS_0052 protoporphyrinogen oxidasechromosome CDS60600 1047 + 0.552054
hisS TPASS_0641 histidyl-tRNA synthetasechromosome CDS703027 1329 - 0.498871
hisT TPASS_0830 pseudouridylate synthasechromosome CDS898075 843 + 0.508897
ileS TPASS_0452 isoleucyl-tRNA synthetasechromosome CDS480454 3276 + 0.4884
infA TPASS_0097 translation initiation factor 1chromosome CDS106438 219 + 0.547945
infB TPASS_0891 translation initiation factor 2chromosome CDS969214 2529 - 0.528667
infC TPASS_0850 translation initiation factor 3chromosome CDS921187 540 - 0.514815
ksgA TPASS_0337 dimethyladenosine transferasechromosome CDS360834 858 + 0.480186
leuS TPASS_0586 leucyl-tRNA synthetasechromosome CDS638430 2637 + 0.535457
lysS1 TPASS_0644 lysyl-tRNA synthetasechromosome CDS706897 1587 - 0.47385
lysS2 TPASS_1040 lysyl-tRNA synthetasechromosome CDS1137610 1056 - 0.52178
map TPASS_0842 methionine aminopeptidasechromosome CDS916392 768 - 0.550781
miaA TPASS_0637 tRNA delta(2)-isopentenylpyrophosphate transferasechromosome CDS697149 951 - 0.526814
ntrB TPASS_0980 histidine phosphokinase/phophatasechromosome CDS1064467 1023 + 0.545455
pcnA TPASS_0270 polynucleotide adenylyltransferasechromosome CDS287287 1437 + 0.548365
pcnB TPASS_0596 polynucleotide adenylyltransferasechromosome CDS649042 1113 - 0.563342
pheS TPASS_0973 phenylalanyl-tRNA synthetase, subunit alphachromosome CDS1057782 1662 + 0.578219
pheT TPASS_0015 phenylalanyl-tRNA synthetase subunit betachromosome CDS13963 1815 + 0.500826
pnp TPASS_0886 polyribonucleotide nucleotidyltransferasechromosome CDS964387 2109 - 0.535325
prfA TPASS_0051 peptide chain release factor 1chromosome CDS59575 1056 + 0.498106
prfB TPASS_0576 peptide chain release factor 2chromosome CDS627252 1107 + 0.560072
proS TPASS_0160 prolyl-tRNA synthetasechromosome CDS182602 1854 - 0.559871
pth TPASS_1011 peptidyl-tRNA hydrolasechromosome CDS1103842 609 - 0.502463
rbfA TPASS_0890 ribosome-binding factor Achromosome CDS968837 381 - 0.490814
rplA TPASS_0238 ribosomal protein L1chromosome CDS244783 681 + 0.537445
rplB TPASS_0192 ribosomal protein L2chromosome CDS207796 822 + 0.562044
rplC TPASS_0189 ribosomal protein L3chromosome CDS206179 627 + 0.54067
rplD TPASS_0190 ribosomal protein L4chromosome CDS206819 651 + 0.493088
rplE TPASS_0201 ribosomal protein L5chromosome CDS211650 558 + 0.464158
rplF TPASS_0204 ribosomal protein L6chromosome CDS212828 540 + 0.518519
rplI TPASS_0060 ribosomal protein L9chromosome CDS69170 471 - 0.47983
rplJ TPASS_0239 ribosomal protein L10chromosome CDS245465 543 + 0.546961
rplK TPASS_0237 ribosomal protein L11chromosome CDS244346 441 + 0.54195
rplL TPASS_0240 ribosomal protein L7/L12chromosome CDS246116 390 + 0.520513
rplM TPASS_1025 ribosomal protein L13chromosome CDS1118930 429 - 0.566434
rplN TPASS_0199 ribosomal protein L14chromosome CDS210962 369 + 0.485095
rplO TPASS_0207 ribosomal protein L15chromosome CDS214453 462 + 0.5671
rplP TPASS_0196 ribosomal protein L16chromosome CDS210028 420 + 0.528571
rplQ TPASS_0213 ribosomal protein L17chromosome CDS218231 495 + 0.523232
rplR TPASS_0205 ribosomal protein L18chromosome CDS213376 363 + 0.498623
rplS TPASS_0909 ribosomal protein L19chromosome CDS990060 372 + 0.521505
rplT TPASS_0848 ribosomal protein L20chromosome CDS920533 369 - 0.523035
rplU TPASS_0745 ribosomal protein L21chromosome CDS810094 318 - 0.518868
rplV TPASS_0194 ribosomal protein L22chromosome CDS208923 375 + 0.528
rplW TPASS_0191 ribosomal protein L23chromosome CDS207456 285 + 0.522807
rplX TPASS_0200 ribosomal protein L24chromosome CDS211342 312 + 0.50641
rpmA TPASS_0743 ribosomal protein L27chromosome CDS809461 264 - 0.541667
rpmB TPASS_0362 ribosomal protein L28chromosome CDS385030 237 + 0.599156
rpmC TPASS_0197 ribosomal protein L29chromosome CDS210462 219 + 0.452055
rpmD TPASS_0206b ribosomal protein L30chromosome CDS214268 186 + 0.569892
rpmE TPASS_0255 ribosomal protein L31chromosome CDS268378 204 + 0.490196
rpmF TPASS_0807 ribosomal protein L32chromosome CDS878831 189 + 0.550265
rpmG TPASS_0234 ribosomal protein L33chromosome CDS243173 171 + 0.497076
rpmH TPASS_0951 ribosomal protein L34chromosome CDS1033910 156 - 0.596154
rpmI TPASS_0849 ribosomal protein L35chromosome CDS920934 201 - 0.452736
rpmJ1 TPASS_0209 ribosomal protein L36chromosome CDS216279 114 + 0.403509
rpsA TPASS_0279 ribosomal protein S1chromosome CDS295426 2592 + 0.552469
rpsB TPASS_0606 ribosomal protein S2chromosome CDS658671 876 - 0.5
rpsC TPASS_0195 ribosomal protein S3chromosome CDS209281 744 + 0.513441
rpsD TPASS_0306 ribosomal protein S4chromosome CDS324050 615 + 0.536585
rpsE TPASS_0206a ribosomal protein S5chromosome CDS213747 519 + 0.518304
rpsF TPASS_0063 ribosomal protein S6chromosome CDS70701 282 - 0.535461
rpsG TPASS_0244 ribosomal protein S7chromosome CDS255066 471 + 0.549894
rpsH TPASS_0203 ribosomal protein S8chromosome CDS212420 399 + 0.491228
rpsI TPASS_1024 ribosomal protein S9chromosome CDS1118525 390 - 0.579487
rpsJ TPASS_0188 ribosomal protein S10chromosome CDS205824 309 + 0.527508
rpsK TPASS_0211 ribosomal protein S11chromosome CDS216791 381 + 0.52231
rpsL TPASS_0243 ribosomal protein S12chromosome CDS254670 375 + 0.544
rpsM TPASS_0210 ribosomal protein S13chromosome CDS216408 366 + 0.469945
rpsN TPASS_0202 ribosomal protein S14chromosome CDS212219 186 + 0.537634
rpsO TPASS_0887 ribosomal protein S15chromosome CDS966643 270 - 0.533333
rpsP TPASS_0905 ribosomal protein S16chromosome CDS988130 372 + 0.599462
rpsQ TPASS_0198 ribosomal protein S17chromosome CDS210695 255 + 0.529412
rpsR TPASS_0061 ribosomal protein S18chromosome CDS69746 300 - 0.513333
rpsS TPASS_0193 ribosomal protein S19chromosome CDS208627 288 + 0.472222
rpsT TPASS_0250b ribosomal protein S20chromosome CDS263793 288 + 0.559028
rpsU TPASS_0758 ribosomal protein S21chromosome CDS823270 210 - 0.485714
serS TPASS_0647 seryl-tRNA synthetasechromosome CDS709983 1281 - 0.494145
thrS TPASS_0837 threonyl-tRNA synthetasechromosome CDS907634 1779 + 0.578977
trmD TPASS_0908 tRNA (guanine-N1)-methyltransferasechromosome CDS989336 753 + 0.556441
trpS TPASS_0632 tryptophanyl-tRNA synthetasechromosome CDS691687 1014 + 0.566075
truB TPASS_0889 tRNA pseudouridine 55 synthasechromosome CDS967759 1101 - 0.564033
tsf TPASS_0605 translation elongation factor TSchromosome CDS657708 873 - 0.558992
tuf TPASS_0187 translation elongation factor TUchromosome CDS204265 1488 + 0.518817
tyrS TPASS_0834 tyrosyl-tRNA synthetasechromosome CDS902380 1251 - 0.518785
valS TPASS_1035 valyl-tRNA synthetasechromosome CDS1129889 2871 - 0.53605