Gene list
Applied filters:
COG category: Transcription
Organism: Borrelia afzelii, PKo
Number of genes found: 23
Hide UniProt / TrEMBL protein name | View in Fasta format (DNA) | View in Fasta format (Protein) | ||||
Borrelia afzelii, PKo | |||||||||
---|---|---|---|---|---|---|---|---|---|
Name | Locus tag | Product / Description | UniProt / TrEMBL protein name | Genomic element | Type | Begin | Length | Strand | GC-content |
NA | BAPKO_0553 | conserved hypothetical protein | PKO-g-P-chrIn1v1.w1 | CDS | 541420 | 777 | + | 0.262548 | |
NA | BAPKO_0356 | fibronectin/fibrinogen-binding protein, putative | PKO-g-P-chrIn1v1.w1 | CDS | 354298 | 1419 | + | 0.24172 | |
NA | BAPKO_0833 | hypothetical protein | PKO-g-P-chrIn1v1.w1 | CDS | 824705 | 1185 | + | 0.243882 | |
NA | BAPKO_0775 | hypothetical protein | PKO-g-P-chrIn1v1.w1 | CDS | 774955 | 402 | - | 0.218905 | |
NA | BAPKO_0364 | transcription factor, putative | PKO-g-P-chrIn1v1.w1 | CDS | 363920 | 489 | - | 0.282209 | |
greA | BAPKO_0134 | transcription elongation factor | PKO-g-P-chrIn1v1.w1 | CDS | 127075 | 2703 | - | 0.278579 | |
mfd | BAPKO_0663 | transcription-repair coupling factor | PKO-g-P-chrIn1v1.w1 | CDS | 654189 | 3375 | - | 0.261333 | |
ntrA | BAPKO_0472 | RNA polymerase sigma-54 factor | PKO-g-P-chrIn1v1.w1 | CDS | 473862 | 1260 | - | 0.243651 | |
nusA | BAPKO_0853 | N-utilization substance protein A | PKO-g-P-chrIn1v1.w1 | CDS | 846779 | 1449 | + | 0.31539 | |
nusB | BAPKO_0108 | N-utilization substance protein B | PKO-g-P-chrIn1v1.w1 | CDS | 105101 | 414 | - | 0.289855 | |
nusG | BAPKO_0409 | transcription antitermination factor | PKO-g-P-chrIn1v1.w1 | CDS | 409550 | 555 | - | 0.322523 | |
recG | BAPKO_0612 | DNA recombinase | PKO-g-P-chrIn1v1.w1 | CDS | 600301 | 2061 | + | 0.311984 | |
rho | BAPKO_0239 | transcription termination factor Rho | PKO-g-P-chrIn1v1.w1 | CDS | 234504 | 1548 | - | 0.322351 | |
rnc | BAPKO_0748 | ribonuclease III | PKO-g-P-chrIn1v1.w1 | CDS | 744487 | 738 | + | 0.315718 | |
rpoA | BAPKO_0530 | DNA-directed RNA polymerase | PKO-g-P-chrIn1v1.w1 | CDS | 511560 | 1035 | + | 0.302415 | |
rpoB | BAPKO_0404 | DNA-directed RNA polymerase | PKO-g-P-chrIn1v1.w1 | CDS | 403897 | 3468 | - | 0.338235 | |
rpoC | BAPKO_0403 | DNA-directed RNA polymerase | PKO-g-P-chrIn1v1.w1 | CDS | 399748 | 4134 | - | 0.329947 | |
rpoD | BAPKO_0756 | RNA polymerase sigma-70 factor | PKO-g-P-chrIn1v1.w1 | CDS | 751926 | 1896 | + | 0.317511 | |
rpoS | BAPKO_0819 | RNA polymerase sigma factor | PKO-g-P-chrIn1v1.w1 | CDS | 815946 | 801 | - | 0.285893 | |
spo0J | BAPKO_0455 | stage 0 sporulation protein J | PKO-g-P-chrIn1v1.w1 | CDS | 455034 | 783 | - | 0.261814 | |
spoT | BAPKO_0200 | guanosine-3,5-bis(diphosphate) 3- pyrophosphohydrolase | PKO-g-P-chrIn1v1.w1 | CDS | 195145 | 2004 | + | 0.290419 | |
xylR-1 | BAPKO_0737 | xylose operon regulatory protein | PKO-g-P-chrIn1v1.w1 | CDS | 737879 | 1209 | + | 0.286187 | |
xylR-2 | BAPKO_0884 | xylose operon regulatory protein | PKO-g-P-chrIn1v1.w1 | CDS | 882830 | 939 | + | 0.309904 |