SGB - The Spirochetes Genome Browser - Gene list

Title

+ Borrelia afzelii, PKo

+ Borrelia burgdorferi ZS7, ZS7

+ Borrelia burgdorferi, B31

+ Borrelia duttonii Ly, Ly

+ Borrelia garinii High passage (300), PBi

+ Borrelia garinii, PBi

+ Borrelia hermsii DAH, DAH

+ Borrelia recurrentis A1, A1

+ Borrelia turicatae 91E135, 91E135

+ Leptospira biflexa serovar Patoc strain Patoc 1 (Ames), Patoc 1 (Ames)

+ Leptospira biflexa serovar Patoc strain Patoc 1 (Paris), Patoc 1 (Paris)

+ Leptospira borgpetersenii serovar Hardjo-bovis JB197, JB197

+ Leptospira borgpetersenii serovar Hardjo-bovis L550, L550

+ Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130

+ Leptospira interrogans serovar lai str. 56601

+ Treponema denticola ATCC 35405

+ Treponema pallidum

+ Treponema pallidum subsp. pallidum SS14, SS14

+ COG functional categories

+ (Clickable) linear whole genome views

+ Horizontal gene transfer (predicted by SIGI-HMM)

+ Sequence retrieval

+ Advanced search

+ Sequence similarity search

+ Best bidirectional hits (protein-based analysis)

+ Gene core sets (protein-based analysis)

+ Gene partnerships (DNA-based analysis)

+ Protein variations (protein-based analysis)

+ Synteny analysis (protein-based analysis)

+ Gene conservation (protein-based analysis)

+ Codon and amino acid usages (DNA- and protein-based analysis)

+ Alignments of whole reference and target genomic elements (DNA-based analysis)

Gene list

Applied filters:

COG category: Transcription
Organism: Borrelia burgdorferi, B31

Number of genes found: 21

Free access


Show UniProt / TrEMBL protein name		View in Fasta format (DNA)		View in Fasta format (Protein)

Borrelia burgdorferi, B31

Name	Locus tag	Product / Description	Genomic element	Type	Begin	Length	Strand	GC-content
NA	BB_0831	xylose operon regulatory protein (xylR-2)	chromosome	CDS	879303	948	+	0.306962
NA	BB_0107	N-utilization substance protein B (nusB)	chromosome	CDS	105418	438	-	0.287671
NA	BB_0771	RNA polymerase sigma factor (rpoS)	chromosome	CDS	812439	801	-	0.27965
NA	BB_0434	stage 0 sporulation protein J (spo0J)	chromosome	CDS	451139	783	-	0.269476
NA	BB_0712	RNA polymerase sigma-70 factor (rpoD)	chromosome	CDS	748123	1896	+	0.319093
NA	BB_0389	DNA-directed RNA polymerase (rpoB)	chromosome	CDS	401693	3468	-	0.340254
NA	BB_0388	DNA-directed RNA polymerase (rpoC)	chromosome	CDS	397544	4134	-	0.333575
NA	BB_0820	predicted coding region BB0820	chromosome	CDS	866494	201	+	0.288557
NA	BB_0693	xylose operon regulatory protein (xylR-1)	chromosome	CDS	734081	1209	+	0.290323
NA	BB_0502	DNA-directed RNA polymerase (rpoA)	chromosome	CDS	507811	1038	+	0.309249
NA	BB_0230	transcription termination factor Rho (rho)	chromosome	CDS	235595	1548	-	0.319767
NA	BB_0705	ribonuclease III (rnc)	chromosome	CDS	740685	741	+	0.310391
NA	BB_0355	transcription factor, putative	chromosome	CDS	365115	489	-	0.280164
NA	BB_A52	outer membrane protein	lp54	CDS	34924	846	+	0.310875
NA	BB_0731	conserved hypothetical protein	chromosome	CDS	771162	402	-	0.223881
NA	BB_0783	predicted coding region BB0783	chromosome	CDS	821185	1185	+	0.243882
NA	BB_0527	conserved hypothetical protein	chromosome	CDS	537520	789	+	0.267427
NA	BB_0347	fibronectin/fibrinogen-binding protein, putative	chromosome	CDS	355482	1428	+	0.241597
NA	BB_0450	RNA polymerase sigma-54 factor (ntrA)	chromosome	CDS	469961	1260	-	0.253968
NA	BB_0394	transcription antitermination factor (nusG)	chromosome	CDS	407344	555	-	0.322523
NA	BB_0800	N-utilization substance protein A (nusA)	chromosome	CDS	843003	1449	+	0.31539