SGB - The Spirochetes Genome Browser - Gene list

Title

+ Borrelia afzelii, PKo

+ Borrelia burgdorferi ZS7, ZS7

+ Borrelia burgdorferi, B31

+ Borrelia duttonii Ly, Ly

+ Borrelia garinii High passage (300), PBi

+ Borrelia garinii, PBi

+ Borrelia hermsii DAH, DAH

+ Borrelia recurrentis A1, A1

+ Borrelia turicatae 91E135, 91E135

+ Leptospira biflexa serovar Patoc strain Patoc 1 (Ames), Patoc 1 (Ames)

+ Leptospira biflexa serovar Patoc strain Patoc 1 (Paris), Patoc 1 (Paris)

+ Leptospira borgpetersenii serovar Hardjo-bovis JB197, JB197

+ Leptospira borgpetersenii serovar Hardjo-bovis L550, L550

+ Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130

+ Leptospira interrogans serovar lai str. 56601

+ Treponema denticola ATCC 35405

+ Treponema pallidum

+ Treponema pallidum subsp. pallidum SS14, SS14

+ COG functional categories

+ (Clickable) linear whole genome views

+ Horizontal gene transfer (predicted by SIGI-HMM)

+ Sequence retrieval

+ Advanced search

+ Sequence similarity search

+ Best bidirectional hits (protein-based analysis)

+ Gene core sets (protein-based analysis)

+ Gene partnerships (DNA-based analysis)

+ Protein variations (protein-based analysis)

+ Synteny analysis (protein-based analysis)

+ Gene conservation (protein-based analysis)

+ Codon and amino acid usages (DNA- and protein-based analysis)

+ Alignments of whole reference and target genomic elements (DNA-based analysis)

Gene list

Applied filters:

COG category: Transcription
Organism: Borrelia hermsii DAH, DAH

Number of genes found: 23

Free access


Show UniProt / TrEMBL protein name		View in Fasta format (DNA)		View in Fasta format (Protein)

Borrelia hermsii DAH, DAH

Name	Locus tag	Product / Description	Genomic element	Type	Begin	Length	Strand	GC-content
NA	BH0198	guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase	chromosome	CDS	194456	2004	+	0.287425
NA	BH0581	ATP-dependent DNA helicase RecG	chromosome	CDS	606514	2064	+	0.305717
NA	BH0388	DNA-directed RNA polymerase beta' chain	chromosome	CDS	399201	4134	-	0.335027
NA	BH0800	N utilization substance protein A	chromosome	CDS	856568	1491	+	0.331992
NA	BH0230	transcription termination factor Rho	chromosome	CDS	234786	1581	-	0.325743
NA	BH0693	hypothetical protein	chromosome	CDS	740382	1209	+	0.311001
NA	BH0347	fibronectin-binding protein	chromosome	CDS	358858	1416	+	0.264124
NA	BH0502	DNA-directed RNA polymerase alpha chain	chromosome	CDS	513000	1035	+	0.317874
NA	BH0771	RNA polymerase sigma factor RpoS	chromosome	CDS	824015	804	-	0.291045
NA	BH0107	N utilization substance protein B	chromosome	CDS	105153	441	-	0.290249
NA	BH0705	ribonuclease III	chromosome	CDS	748006	732	+	0.326503
NA	BH0355	CarD-like transcriptional regulator	chromosome	CDS	368457	486	-	0.294239
NA	BH0831	hypothetical protein	chromosome	CDS	894500	951	+	0.314406
NA	BH0623	transcription-repair coupling factor	chromosome	CDS	657358	3369	-	0.28881
NA	BH0731	chromosome partitioning protein ParB	chromosome	CDS	778472	393	-	0.236641
NA	BH0132	transcription elongation factor GreA	chromosome	CDS	128102	2706	-	0.292683
NA	BH0394	transcription antitermination protein NusG	chromosome	CDS	409007	555	-	0.345946
NA	BH0783	hypothetical protein	chromosome	CDS	832797	1185	+	0.268354
NA	BH0712	RNA polymerase sigma factor RpoD	chromosome	CDS	755432	1893	+	0.320127
NA	BH0434	probable chromosome partitioning protein ParB	chromosome	CDS	454705	813	-	0.281673
NA	BH0522A	transcriptional regulatory protein	chromosome	CDS	539919	1584	+	0.270202
NA	BH0389	DNA-directed RNA polymerase beta chain	chromosome	CDS	403349	3468	-	0.345444
NA	BH0527	Bvg accessory factor	chromosome	CDS	543984	798	+	0.299499