SGB - The Spirochetes Genome Browser - Gene list

Title

+ Borrelia afzelii, PKo

+ Borrelia burgdorferi ZS7, ZS7

+ Borrelia burgdorferi, B31

+ Borrelia duttonii Ly, Ly

+ Borrelia garinii High passage (300), PBi

+ Borrelia garinii, PBi

+ Borrelia hermsii DAH, DAH

+ Borrelia recurrentis A1, A1

+ Borrelia turicatae 91E135, 91E135

+ Leptospira biflexa serovar Patoc strain Patoc 1 (Ames), Patoc 1 (Ames)

+ Leptospira biflexa serovar Patoc strain Patoc 1 (Paris), Patoc 1 (Paris)

+ Leptospira borgpetersenii serovar Hardjo-bovis JB197, JB197

+ Leptospira borgpetersenii serovar Hardjo-bovis L550, L550

+ Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130

+ Leptospira interrogans serovar lai str. 56601

+ Treponema denticola ATCC 35405

+ Treponema pallidum

+ Treponema pallidum subsp. pallidum SS14, SS14

+ COG functional categories

+ (Clickable) linear whole genome views

+ Horizontal gene transfer (predicted by SIGI-HMM)

+ Sequence retrieval

+ Advanced search

+ Sequence similarity search

+ Best bidirectional hits (protein-based analysis)

+ Gene core sets (protein-based analysis)

+ Gene partnerships (DNA-based analysis)

+ Protein variations (protein-based analysis)

+ Synteny analysis (protein-based analysis)

+ Gene conservation (protein-based analysis)

+ Codon and amino acid usages (DNA- and protein-based analysis)

+ Alignments of whole reference and target genomic elements (DNA-based analysis)

Gene list

Applied filters:

COG category: Transcription
Organism: Borrelia turicatae 91E135, 91E135

Number of genes found: 22

Free access


Show UniProt / TrEMBL protein name		View in Fasta format (DNA)		View in Fasta format (Protein)

Borrelia turicatae 91E135, 91E135

Name	Locus tag	Product / Description	Genomic element	Type	Begin	Length	Strand	GC-content
NA	BT0831	glucokinase	chromosome	CDS	890850	951	+	0.312303
NA	BT0771	RNA polymerase sigma factor RpoS	chromosome	CDS	820347	804	-	0.293532
NA	BT0705	ribonuclease III	chromosome	CDS	745248	735	+	0.307483
NA	BT0230	transcription termination factor Rho	chromosome	CDS	234181	1545	-	0.321683
NA	BT0355	CarD-like transcriptional regulator	chromosome	CDS	367105	486	-	0.281893
NA	BT0581	ATP-dependent DNA helicase RecG	chromosome	CDS	603541	2070	+	0.296135
NA	BT0693	xylose repressor	chromosome	CDS	737669	1209	+	0.306865
NA	BT0107	N utilization substance protein B	chromosome	CDS	105123	441	-	0.272109
NA	BT0522A	two-component response regulator	chromosome	CDS	536814	1584	+	0.267045
NA	BT0347	fibronectin-binding protein	chromosome	CDS	357499	1410	+	0.256738
NA	BT0198	guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase	chromosome	CDS	194175	2004	+	0.28493
NA	BT0800	N utilization substance protein A	chromosome	CDS	852902	1488	+	0.330645
NA	BT0389	DNA-directed RNA polymerase beta chain	chromosome	CDS	402007	3468	-	0.340542
NA	BT0712	RNA polymerase sigma factor RpoD	chromosome	CDS	752668	1893	+	0.323296
NA	BT0388	DNA-directed RNA polymerase beta' chain	chromosome	CDS	397859	4134	-	0.342042
NA	BT0132	transcription elongation factor GreA	chromosome	CDS	127865	2703	-	0.284499
NA	BT0731	chromosome partitioning protein ParB	chromosome	CDS	775684	405	-	0.234568
NA	BT0502	DNA-directed RNA polymerase alpha chain	chromosome	CDS	510426	1035	+	0.31401
NA	BT0527	Bvg accessory factor	chromosome	CDS	540873	789	+	0.30038
NA	BT0394	transcription antitermination protein NusG	chromosome	CDS	407678	555	-	0.36036
NA	BT0623	transcription-repair coupling factor	chromosome	CDS	654783	3369	-	0.277234
NA	BT0434	probable chromosome partitioning protein ParB	chromosome	CDS	452139	813	-	0.279213