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COG category: Transcription
Organism: Leptospira biflexa serovar Patoc strain Patoc 1 (Ames), Patoc 1 (Ames)

Number of genes found: 180

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Leptospira biflexa serovar Patoc strain Patoc 1 (Ames), Patoc 1 (Ames)
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
NA LBF_0604 Response regulatorchromosome I CDS637171 519 - 0.371869
NA LBF_2836 Transcriptional regulator, AraC familychromosome I CDS3040682 1107 - 0.330623
NA LBF_1931 Transcriptional regulator, ArsR familychromosome I CDS2064807 300 + 0.36
NA LBF_2997 Transcriptional regulator, AcrR-familychromosome I CDS3231195 645 + 0.462016
NA LBF_0411 Transcriptional regulator, ArsR familychromosome I CDS428813 345 - 0.371015
NA LBF_2372 Transcription activator, AraC familychromosome I CDS2525667 714 - 0.341737
NA LBF_4052 RNA polymerase sigma subunitchromosome II CDS50639 525 + 0.36381
NA LBF_3159 Transcriptional regulatorchromosome I CDS3393915 792 - 0.381313
NA LBF_1027 Serine phosphatase RsbU, regulator of sigma subunitchromosome I CDS1108435 1761 - 0.396366
NA LBF_0127 Transcription regulatorchromosome I CDS131615 888 + 0.413288
NA LBF_0770 Transcriptional regulator, marR familychromosome I CDS820997 438 + 0.381279
NA LBF_0593 Transcription Regulatorchromosome I CDS625998 549 + 0.326047
NA LBF_1063 Transcriptional regulatorchromosome I CDS1154584 573 + 0.34555
NA LBF_2182 Transcriptional regulatorchromosome I CDS2328778 246 + 0.313008
NA LBF_1034 RNA polymerase sigma subunitchromosome I CDS1117623 954 - 0.360587
NA LBF_5009 Serine phosphatase RsbU, regulator of sigma subunitp74 CDS5608 1878 + 0.35836
NA LBF_1323 Transcriptional regulatorchromosome I CDS1439546 465 + 0.354839
NA LBF_1402 Transcriptional regulator, MocR familychromosome I CDS1522648 1194 + 0.404523
NA LBF_3233 Serine phosphatase RsbU, regulator of sigma subunitchromosome I CDS3462298 2022 - 0.347676
NA LBF_0386 Transcriptional regulatorchromosome I CDS402104 813 - 0.316113
NA LBF_0804 Transcriptional regulator, AcrR-familychromosome I CDS854490 621 - 0.394525
NA LBF_0315 Serine phosphatase RsbU, regulator of sigma subunitchromosome I CDS328528 1986 + 0.380161
NA LBF_2653 Hypothetical proteinchromosome I CDS2837190 813 - 0.399754
NA LBF_3262 Transcriptional regulatorchromosome I CDS3503759 567 - 0.373898
NA LBF_2922 Transcriptional regulator, AcrR-familychromosome I CDS3147677 627 - 0.341308
NA LBF_3164 Response regulatorchromosome I CDS3397782 366 + 0.382514
NA LBF_2734 Superfamily II DNA and RNA helicasechromosome I CDS2927765 1416 - 0.410311
NA LBF_3241 Transcriptional regulator, AcrR-familychromosome I CDS3474857 582 - 0.367698
NA LBF_3205 Transcriptional regulator, AcrR-familychromosome I CDS3441324 591 + 0.409475
NA LBF_2544 Transcriptional regulator, AraC familychromosome I CDS2725522 870 + 0.35977
NA LBF_2187 Hypothetical proteinchromosome I CDS2330964 318 + 0.301887
NA LBF_2714 RNA-binding proteinchromosome I CDS2907135 264 - 0.340909
NA LBF_2409 Transcriptional regulator, AcrR-familychromosome I CDS2572539 663 - 0.386124
NA LBF_2908 Response regulatorchromosome I CDS3135126 738 + 0.359079
NA LBF_0355 Acetyltransferasechromosome I CDS376055 450 - 0.342222
NA LBF_0893 Sigma factor regulatory proteinchromosome I CDS963889 1368 + 0.364035
NA LBF_3305 Hypothetical proteinchromosome I CDS3550381 489 + 0.384458
NA LBF_1524 Serine phosphatase RsbU, regulator of sigma subunitchromosome I CDS1650995 2748 + 0.396652
NA LBF_1977 acetyltransferasechromosome I CDS2116923 462 - 0.320346
NA LBF_1105 Transcriptional regulator, marR familychromosome I CDS1199852 459 + 0.379085
NA LBF_2729 Transcriptional regulator, AraC familychromosome I CDS2921654 1098 - 0.324226
NA LBF_1390 Transcriptional regulator, AraC familychromosome I CDS1513097 825 + 0.364848
NA LBF_2438 Response regulatorchromosome I CDS2605154 768 - 0.321615
NA LBF_3114 Response regulatorchromosome I CDS3345644 675 + 0.423704
NA LBF_2172 SoxR-related transcriptional regulatorchromosome I CDS2319296 384 + 0.283854
NA LBF_1826 RNA-binding proteinchromosome I CDS1979616 270 - 0.381481
NA LBF_2401 Transcriptional regulator, AcrR-familychromosome I CDS2564320 663 - 0.3454
NA LBF_3111 RNA polymerase sigma subunitchromosome I CDS3344357 489 + 0.380368
NA LBF_0177 Receiver component of a two-component response regulatorchromosome I CDS180880 672 + 0.388393
NA LBF_2712 Transcriptional regulator, AraC familychromosome I CDS2905551 1089 + 0.325069
NA LBF_1734 Transcriptional regulator, marR familychromosome I CDS1870994 462 - 0.393939
NA LBF_5006 Transcriptional regulator, AcrR-familyp74 CDS4276 609 - 0.374384
NA LBF_2558 Serine phosphatase RsbU, regulator of sigma subunitchromosome I CDS2740895 1245 - 0.362249
NA LBF_0202 Acetyltransferasechromosome I CDS205016 447 + 0.380313
NA LBF_1690 Regulator of sigma subunitchromosome I CDS1823958 1518 - 0.381423
NA LBF_3118 Serine phosphatase RsbU, regulator of sigma subunitchromosome I CDS3350143 2370 + 0.328692
NA LBF_2197 transcription regulator, SoxR-relatedchromosome I CDS2337878 393 + 0.284987
NA LBF_1080 Transcriptional regulatorchromosome I CDS1174691 624 - 0.423077
NA LBF_4166 Serine phosphatase RsbU, regulator of sigma subunitchromosome II CDS167732 1746 + 0.416953
NA LBF_0203 Transcriptional regulator, AcrR-familychromosome I CDS205556 633 - 0.436019
NA LBF_1008 Serine phosphatase RsbU, regulator of sigma subunitchromosome I CDS1087532 1926 - 0.373832
NA LBF_5042 Transcriptional regulator, AcrR-familyp74 CDS59199 561 - 0.351159
NA LBF_0732 Transcriptional regulatorchromosome I CDS778284 1119 - 0.379803
NA LBF_2082 Superfamily II DNA and RNA helicasechromosome I CDS2233540 1590 - 0.433962
NA LBF_2609 Serine phosphatase RsbU, regulator of sigma subunitchromosome I CDS2795260 2085 - 0.361631
NA LBF_2130 SoxR-related transcriptional regulatorchromosome I CDS2281589 384 + 0.283854
NA LBF_2907 Serine phosphatase RsbU, regulator of sigma subunitchromosome I CDS3133192 1926 + 0.34839
NA LBF_1401 Transcriptional regulator, MocR-familychromosome I CDS1521178 1404 - 0.361823
NA LBF_2891 RNA polymerase sigma subunitchromosome I CDS3110292 873 + 0.37457
NA LBF_1368 Response regulator of a two component regulatory systemchromosome I CDS1490172 684 - 0.464912
NA LBF_1465 Transcriptional regulator, marR familychromosome I CDS1588902 471 + 0.426752
NA LBF_2884 Conserved hypothetical proteinchromosome I CDS3099824 204 + 0.465686
NA LBF_2334 Transcriptional regulator, AcrR-familychromosome I CDS2479263 594 - 0.395623
NA LBF_0338 ATP-dependent DNA helicase, recG-relatedchromosome I CDS353503 2061 + 0.388646
NA LBF_2413 AraC-family transcriptional regulatorchromosome I CDS2578902 816 - 0.333333
NA LBF_1188 RNA polymerase sigma factorchromosome I CDS1293345 1227 + 0.341483
NA LBF_0296 Serine phosphatase RsbU, regulator of sigma subunitchromosome I CDS304611 1962 - 0.348624
NA LBF_2698 Transcriptional regulator, marR familychromosome I CDS2889882 438 - 0.363014
NA LBF_0546 Serine phosphatase RsbU, regulator of sigma subunitchromosome I CDS568800 1962 - 0.362385
NA LBF_0720 Transcriptional regulator, AcrR-familychromosome I CDS764858 657 + 0.398782
NA LBF_2387 Serine phosphatase RsbU, regulator of sigma subunitchromosome I CDS2549373 1890 - 0.336508
NA LBF_1488 RNA binding proteinchromosome I CDS1612872 369 - 0.495935
NA LBF_4098 RNA polymerase sigma subunitchromosome II CDS98281 846 - 0.416076
NA LBF_2943 Transcriptional regulator, AcrR-familychromosome I CDS3169445 723 - 0.445367
NA LBF_0207 Transcriptional regulator (ArsR family)chromosome I CDS208610 345 - 0.385507
NA LBF_0383 Sensor protein of a two-component response regulatorchromosome I CDS398528 678 + 0.383481
NA LBF_0100 Transcriptional regulator, AcrR-familychromosome I CDS105534 579 - 0.367876
NA LBF_1715 Serine phosphatase RsbU, regulator of sigma subunitchromosome I CDS1851226 1821 - 0.41296
NA LBF_0094 Response regulatorchromosome I CDS99395 930 + 0.376344
NA LBF_1871 Serine phosphatase, regulator of sigma subunitchromosome I CDS2019615 1128 - 0.382092
NA LBF_1366 Serine phosphatase RsbU, regulator of sigma subunitchromosome I CDS1487609 1737 + 0.388025
NA LBF_0690 Serine phosphatase RsbU, regulator of sigma subunitchromosome I CDS727736 1704 - 0.411385
NA LBF_0854 Transcriptional regulator, AcrR-familychromosome I CDS913114 702 + 0.371795
NA LBF_5001 ParB-like proteinp74 CDS878 879 + 0.358362
NA LBF_2770 Transcriptional regulator, ArsR familychromosome I CDS2973380 342 + 0.391813
NA LBF_3322 DNA/RNA helicase Superfamily IIchromosome I CDS3567728 2847 + 0.361433
NA LBF_1664 Transcriptional regulatorchromosome I CDS1793480 414 + 0.39372
NA LBF_1496 Response regulator with CheY-like receiver and HD-GYP domainchromosome I CDS1622081 1002 + 0.373253
NA LBF_2161 transcriptional regulatorchromosome I CDS2310756 1413 + 0.326964
NA LBF_3046 Receiver component of a two-component response regulatorchromosome I CDS3278646 597 + 0.40201
NA LBF_0933 TenA-related transcription activatorchromosome I CDS1008297 696 + 0.462644
NA LBF_2594 Transcriptional regulatorchromosome I CDS2781593 582 - 0.405498
NA LBF_2156 Hypothetical proteinchromosome I CDS2307442 282 + 0.265957
NA LBF_2095 RNA polymerase sigma subunitchromosome I CDS2244315 606 - 0.425743
NA LBF_2951 Hypothetical proteinchromosome I CDS3176770 816 + 0.447304
NA LBF_2716 Transcriptional regulator, AcrR-familychromosome I CDS2910384 567 - 0.372134
NA LBF_2449 Receiver component of a two-component response regulatorchromosome I CDS2619542 639 + 0.341158
NA LBF_2898 Transcriptional regulator, AcrR-familychromosome I CDS3117360 687 + 0.3377
NA LBF_0119 Transcriptional regulator, AcrR-familychromosome I CDS126031 597 - 0.40201
NA LBF_2786 Transcriptional regulator, ArsR familychromosome I CDS2985853 351 - 0.441595
NA LBF_0359 Transcriptional regulatorchromosome I CDS378724 300 - 0.323333
NA LBF_2320 Transcriptional regulatorchromosome I CDS2466930 639 - 0.380282
NA LBF_0286 Transcriptional regulator, AcrR-familychromosome I CDS296209 579 - 0.374784
NA LBF_5022 Response regulatorp74 CDS27580 1125 + 0.389333
NA LBF_1190 Transcriptional regulator, ArsR familychromosome I CDS1296207 363 - 0.418733
NA LBF_1442 Transcriptional regulator/sugar kinasechromosome I CDS1562168 897 - 0.411371
NA LBF_4138 RNA polymerase sigma subunitchromosome II CDS138771 519 - 0.400771
NA LBF_4230 Transcriptional regulator, ArsR familychromosome II CDS233265 324 + 0.441358
NA LBF_4001 ParB-like proteinchromosome II CDS810 822 + 0.420925
NA LBF_3018 RNA-binding proteinchromosome I CDS3249934 264 + 0.378788
NA LBF_1988 Transcriptional regulatorchromosome I CDS2127545 339 - 0.383481
NA LBF_2778 Acetyltransferasechromosome I CDS2980954 471 - 0.397028
NA LBF_4025 ParB-like proteinchromosome II CDS27376 711 + 0.357243
NA LBF_3015 Serine phosphatase RsbU, regulator of sigma subunitchromosome I CDS3245411 1977 + 0.388973
NA LBF_4225 Response regulatorchromosome II CDS231049 726 + 0.406336
NA LBF_2717 Conserved hypothetical proteinchromosome I CDS2911140 1149 + 0.318538
NA LBF_2408 Transcriptional regulator, AcrR-familychromosome I CDS2571881 654 + 0.383792
NA LBF_3294 Transcription antiterminatorchromosome I CDS3538266 540 + 0.368519
NA LBF_1049 Response regulator of the LytR/AlgR familychromosome I CDS1142501 705 + 0.33617
NA LBF_2736 Conserved hypothetical proteinchromosome I CDS2934312 483 - 0.395445
NA LBF_2270 Receiver component of a two-component response regulatorchromosome I CDS2415645 621 + 0.460548
NA LBF_0233 Transcriptional regulatorchromosome I CDS233887 954 - 0.390985
NA LBF_3180 Serine phosphatase RsbU, regulator of sigma subunitchromosome I CDS3414724 1953 - 0.332821
NA LBF_2359 Transcriptional regulator, AcrR-familychromosome I CDS2510195 669 + 0.41704
NA LBF_0863 Transcriptional regulator, AcrR-familychromosome I CDS922174 642 - 0.433022
NA LBF_2892 Transcriptional regulator, AraC-relatedchromosome I CDS3111132 897 - 0.370123
NA LBF_1179 Transcriptional regulator, LysR familychromosome I CDS1284125 903 - 0.365449
NA LBF_4038 Transcriptional regulator, AcrR-familychromosome II CDS37690 642 + 0.376947
NA LBF_5004 Transcriptional regulator, AcrR-familyp74 CDS3114 588 - 0.358844
NA LBF_4088 Receiver component of a two-component response regulatorchromosome II CDS88766 657 + 0.401826
NA LBF_0068 Transcriptional regulatorchromosome I CDS72178 462 - 0.402597
NA LBF_2931 Transcriptional regulator, AcrR-familychromosome I CDS3159872 624 + 0.43109
NA LBF_3358 ParB-like proteinchromosome I CDS3600359 897 - 0.400223
NA LBF_4146 Response regulatorchromosome II CDS147696 1191 + 0.36272
NA LBF_3307 Transcriptional regulator, AcrR-familychromosome I CDS3551979 660 + 0.416667
NA LBF_0165 Conserved hypothetical proteinchromosome I CDS169097 1122 - 0.437611
NA LBF_1493 Transcriptional regulatorchromosome I CDS1616801 420 + 0.359524
NA LBF_1549 Acetyltransferasechromosome I CDS1682011 456 + 0.390351
NA LBF_2657 SoxR-related transcriptional regulatorchromosome I CDS2840976 393 + 0.37659
NA LBF_3038 Transcriptional regulator, AcrR familychromosome I CDS3270290 621 + 0.331723
NA LBF_0856 Acetyltransferasechromosome I CDS915691 474 - 0.407173
NA LBF_0912 RNA polymerase sigma subunitchromosome I CDS983628 801 + 0.421973
NA LBF_2429 Transcriptional regulator, AraC familychromosome I CDS2595610 1593 - 0.355304
NA LBF_1176 Transcriptional regulator, AraC familychromosome I CDS1278877 1425 - 0.353684
NA LBF_3231 Transcriptional regulator, ArsR familychromosome I CDS3460304 363 - 0.410468
NA LBF_2928 Transcriptional regulator, AraC familychromosome I CDS3155238 1569 - 0.354366
NA LBF_2906 Transcriptional regulatorchromosome I CDS3132184 918 - 0.35512
greA LBF_2266 greA transcription elongation factor-related proteinchromosome I CDS2409915 2766 - 0.39154
greA-1 LBF_2700 Transcription elongation factorchromosome I CDS2890929 417 + 0.326139
hrcA LBF_3267 Heat-inducible transcriptional repressor, HrcAchromosome I CDS3509004 1032 - 0.416667
lexA LBF_1262 Repressor lexAchromosome I CDS1378327 609 + 0.474548
mfd LBF_1770 Transcription-repair coupling factorchromosome I CDS1911714 3423 - 0.378907
nusA LBF_1471 Transcription elongation factorchromosome I CDS1593655 1401 + 0.460385
nusB LBF_2085 Transcription antitermination proteinchromosome I CDS2238070 423 - 0.434988
nusG LBF_1925 Transcription antiterminatorchromosome I CDS2061965 555 - 0.412613
paiB LBF_0354 PaiB transcriptional regulatorchromosome I CDS375416 612 - 0.379085
rho LBF_0998 Transcription termination factor Rhochromosome I CDS1079274 1404 + 0.451567
rnc LBF_2504 Ribonuclease IIIchromosome I CDS2678201 729 - 0.411523
rpoA LBF_1886 DNA-directed RNA polymerase, alpha subunitchromosome I CDS2033501 978 - 0.392638
rpoB LBF_1920 DNA-directed RNA polymerase, beta subunitchromosome I CDS2056005 3687 - 0.442365
rpoC LBF_1919 DNA-directed RNA polymerase, beta subunitchromosome I CDS2051689 4302 - 0.451883
rpoD LBF_1515 DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32)chromosome I CDS1639265 1773 + 0.406091
rpoE LBF_2055 RNA polymerase sigma subunitchromosome I CDS2209517 570 + 0.412281
rpoN LBF_1600 DNA-directed RNA polymerase sigma-54 subunitchromosome I CDS1730481 1422 + 0.376231
rsbU-3 LBF_0517 Serine phosphatase RsbU, regulator of sigma subunitchromosome I CDS537772 1284 + 0.363707
rsbU-4 LBF_2378 Serine phosphatase RsbU, regulator of sigma subunitchromosome I CDS2533674 1968 + 0.341972
rsbU-7 LBF_1752 Serine phosphatase RsbU, regulator of sigma subunitchromosome I CDS1889265 1914 + 0.325496
spoT LBF_2258 GTP pyrophosphokinasechromosome I CDS2400949 2055 - 0.39854
srmB LBF_4201 ATP-dependent RNA helicase (superfamily II)chromosome II CDS209180 1590 + 0.438365
vacB LBF_0022 Exoribonuclease Rchromosome I CDS23907 2193 - 0.367533