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2024-05-20 16:08:37

Gene list

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COG category: Replication, recombination and repair
Organism: Borrelia afzelii, PKo

Number of genes found: 71

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Borrelia afzelii, PKo
NameLocus tagProduct / DescriptionUniProt / TrEMBL protein nameGenomic elementTypeBeginLengthStrandGC-content
NA BAPKO_2527 hypothetical protein PKO72-g-a-44e11.f1 CDS27194 3834 - 0.24361
NA BAPKO_3504 hypothetical protein PKO134-G-p-62.p179 CDS2426 384 + 0.231771
NA BAPKO_3514 hypothetical protein PKO134-G-p-62.p179 CDS7706 597 + 0.241206
NA BAPKO_0099 DNA mismatch repair protein, putative PKO-g-P-chrIn1v1.w1 CDS94347 2337 - 0.260163
NA BAPKO_4522 hypothetical protein PKO72-g-a-9f08.f1 CDS20905 1137 + 0.26825
NA BAPKO_2508 hypothetical protein PKO72-g-a-44e11.f1 CDS7447 3831 - 0.25372
NA BAPKO_2525 hypothetical protein PKO72-g-a-44e11.f1 CDS25621 1176 - 0.25
NA BAPKO_3517 hypothetical protein PKO134-G-p-62.p179 CDS9142 327 - 0.235474
NA BAPKO_2069 hypothetical protein PKO134-g-a-01h07.f1 CDS54670 756 - 0.261905
NA BAPKO_3011 hypothetical protein PKO72-g-a-39f06.r1 CDS9826 318 - 0.232704
NA BAPKO_2006 antigen, S1 PKO134-g-a-01h07.f1 CDS5488 1248 - 0.273237
NA BAPKO_3505 hypothetical protein PKO134-G-p-62.p179 CDS2877 159 + 0.283019
NA BAPKO_5501 hypothetical protein PKO72-g-a-32h02.s1 CDS1351 1377 - 0.342048
NA BAPKO_3518 hypothetical protein PKO134-G-p-62.p179 CDS9888 3213 + 0.252412
NA BAPKO_6050 hypothetical protein PKO134-g-b-13c07.f1 CDS1 176 - 0.323864
NA BAPKO_0196 conserved hypothetical protein PKO-g-P-chrIn1v1.w1 CDS190968 807 - 0.277571
NA BAPKO_5526 hypothetical protein PKO72-g-a-32h02.s1 CDS20545 2178 + 0.275023
NA BAPKO_2065 hypothetical protein PKO134-g-a-01h07.f1 CDS50661 777 - 0.279279
NA BAPKO_4501 hypothetical protein PKO72-g-a-9f08.f1 CDS699 228 - 0.236842
NA BAPKO_3502 hypothetical protein PKO134-G-p-62.p179 CDS1863 243 + 0.226337
NA BAPKO_0478 conserved hypothetical protein PKO-g-P-chrIn1v1.w1 CDS478533 972 + 0.223251
NA BAPKO_0667 small primase-like protein PKO-g-P-chrIn1v1.w1 CDS660772 546 - 0.245421
NA BAPKO_4530 hypothetical protein PKO72-g-a-9f08.f1 CDS25091 1356 - 0.371681
NA BAPKO_3008 hypothetical protein PKO72-g-a-39f06.r1 CDS6922 882 - 0.260771
NA BAPKO_0813 hypothetical protein PKO-g-P-chrIn1v1.w1 CDS810397 1047 - 0.222541
NA BAPKO_6052 hypothetical protein PKO134-g-b-13c07.f1 CDS980 78 - 0.320513
NA BAPKO_5527 hypothetical protein PKO72-g-a-32h02.s1 CDS22650 1131 + 0.266136
NA BAPKO_0213 conserved hypothetical protein PKO-g-P-chrIn1v1.w1 CDS207485 570 - 0.268421
NA BAPKO_4035 hypothetical protein PKO72-g-a-43h03.f1 CDS21910 777 + 0.263835
dnaA BAPKO_0459 chromosomal replication initiator protein PKO-g-P-chrIn1v1.w1 CDS460469 1458 + 0.283951
dnaB BAPKO_0112 replicative DNA helicase PKO-g-P-chrIn1v1.w1 CDS109328 1368 - 0.305556
dnaE BAPKO_0610 DNA polymerase III, subunit alpha PKO-g-P-chrIn1v1.w1 CDS596216 3486 + 0.3035
dnaG BAPKO_0755 DNA primase PKO-g-P-chrIn1v1.w1 CDS750141 1782 + 0.26936
dnaN BAPKO_0460 DNA polymerase III, subunit beta PKO-g-P-chrIn1v1.w1 CDS462159 1161 + 0.26615
dnaX BAPKO_0490 DNA polymerase III, subunits gamma and tau PKO-g-P-chrIn1v1.w1 CDS486587 1701 + 0.292181
exoA BAPKO_0559 exodeoxyribonuclease III PKO-g-P-chrIn1v1.w1 CDS546959 768 + 0.285156
gyrA BAPKO_0457 DNA gyrase, subunit A PKO-g-P-chrIn1v1.w1 CDS455934 2433 - 0.312783
gyrB BAPKO_0458 DNA gyrase, subunit B PKO-g-P-chrIn1v1.w1 CDS458378 1905 - 0.31811
hbb BAPKO_0241 hbbU protein PKO-g-P-chrIn1v1.w1 CDS236539 327 - 0.311927
hrpA BAPKO_0880 ATP-dependent helicase PKO-g-P-chrIn1v1.w1 CDS873629 2472 - 0.282362
lig BAPKO_0581 DNA ligase PKO-g-P-chrIn1v1.w1 CDS565973 1983 + 0.278366
mag BAPKO_0442 3-methyladenine DNA glycosylase PKO-g-P-chrIn1v1.w1 CDS444880 561 - 0.306595
mfd BAPKO_0663 transcription-repair coupling factor PKO-g-P-chrIn1v1.w1 CDS654189 3375 - 0.261333
mutL BAPKO_0218 DNA mismatch repair protein PKO-g-P-chrIn1v1.w1 CDS214514 1836 + 0.270153
mutS BAPKO_0850 DNA mismatch repair protein PKO-g-P-chrIn1v1.w1 CDS843020 2589 + 0.277327
napA-2 BAPKO_0735 neutrophil activating protein PKO-g-P-chrIn1v1.w1 CDS734984 531 + 0.278719
nth BAPKO_0791 endonuclease III PKO-g-P-chrIn1v1.w1 CDS792921 645 + 0.272868
parC BAPKO_0035 DNA topoisomerase IV PKO-g-P-chrIn1v1.w1 CDS31948 1881 - 0.275917
parE BAPKO_0036 DNA topoisomerase IV PKO-g-P-chrIn1v1.w1 CDS33828 1800 - 0.292222
polA BAPKO_0577 DNA polymerase I PKO-g-P-chrIn1v1.w1 CDS561792 2670 - 0.282772
priA BAPKO_0013 primosomal protein N PKO-g-P-chrIn1v1.w1 CDS12503 1992 + 0.251506
recA BAPKO_0133 recA protein PKO-g-P-chrIn1v1.w1 CDS125964 1098 - 0.359745
recB BAPKO_0676 exodeoxyribonuclease V, beta chain PKO-g-P-chrIn1v1.w1 CDS668766 3513 - 0.235981
recC BAPKO_0677 exodeoxyribonuclease V, gamma chain PKO-g-P-chrIn1v1.w1 CDS672284 3240 - 0.223148
recD BAPKO_0675 exodeoxyribonuclease V, alpha chain PKO-g-P-chrIn1v1.w1 CDS666937 1833 - 0.237316
recG BAPKO_0612 DNA recombinase PKO-g-P-chrIn1v1.w1 CDS600301 2061 + 0.311984
recJ BAPKO_0264 single-stranded-DNA-specific exonuclease PKO-g-P-chrIn1v1.w1 CDS262898 2121 + 0.247996
rep BAPKO_0640 rep helicase, single-stranded DNA-dependent ATPase PKO-g-P-chrIn1v1.w1 CDS636254 1980 + 0.267172
rnhB BAPKO_0046 ribonuclease H PKO-g-P-chrIn1v1.w1 CDS45227 546 + 0.272894
ruvA BAPKO_0022 Holliday junction DNA helicase PKO-g-P-chrIn1v1.w1 CDS21959 591 - 0.287648
ruvB BAPKO_0021 Holliday junction DNA helicase PKO-g-P-chrIn1v1.w1 CDS20856 1044 - 0.338123
sbcC BAPKO_0883 exonuclease SbcC PKO-g-P-chrIn1v1.w1 CDS879956 2841 + 0.253432
sbcD BAPKO_0882 exonuclease SbcD PKO-g-P-chrIn1v1.w1 CDS878728 1242 + 0.266506
smf BAPKO_0307 smf protein PKO-g-P-chrIn1v1.w1 CDS304544 948 - 0.297468
ssb BAPKO_0115 single-stranded DNA-binding protein PKO-g-P-chrIn1v1.w1 CDS111542 450 - 0.293333
topA BAPKO_0881 DNA topoisomerase I PKO-g-P-chrIn1v1.w1 CDS876103 2550 - 0.281569
ung BAPKO_0053 uracil DNA glycosylase PKO-g-P-chrIn1v1.w1 CDS49108 672 + 0.276786
uvrA BAPKO_0890 excinuclease ABC, subunit A PKO-g-P-chrIn1v1.w1 CDS893869 2853 + 0.318962
uvrB BAPKO_0889 excinuclease ABC, subunit B PKO-g-P-chrIn1v1.w1 CDS891858 1995 + 0.310276
uvrC BAPKO_0481 excinuclease ABC, subunit C PKO-g-P-chrIn1v1.w1 CDS480235 1728 - 0.271412
uvrD BAPKO_0353 DNA helicase PKO-g-P-chrIn1v1.w1 CDS350147 2097 - 0.266094