Gene list
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COG category: Replication, recombination and repair
Organism: Borrelia hermsii DAH, DAH
Number of genes found: 53
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Borrelia hermsii DAH, DAH | |||||||||
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Name | Locus tag | Product / Description | UniProt / TrEMBL protein name | Genomic element | Type | Begin | Length | Strand | GC-content |
NA | BH0462A | recombination protein RecR | RecName: Full=Recombination protein RecR; | chromosome | CDS | 488941 | 585 | + | 0.319658 |
NA | BH0836 | excinuclease ABC subunit B | RecName: Full=UvrABC system protein B; Short=Protein UvrB; AltName: Full=Excinuclease ABC subunit B; | chromosome | CDS | 904154 | 1965 | + | 0.308906 |
NA | BH0634 | exodeoxyribonuclease V gamma chain | SubName: Full=Exodeoxyribonuclease V gamma chain; EC=3.1.11.5; | chromosome | CDS | 675121 | 3222 | - | 0.2545 |
NA | BH0735A | ATP-dependent helicase, DinG family | SubName: Full=ATP-dependent helicase, DinG family; | chromosome | CDS | 785987 | 2058 | - | 0.265792 |
NA | BH0309A | DNA repair protein RecN | RecName: Full=DNA repair protein RecN; AltName: Full=Recombination protein N; | chromosome | CDS | 320697 | 1659 | - | 0.317661 |
NA | BH0254 | single-stranded-DNA-specific exonuclease RecJ | SubName: Full=Single-stranded-DNA-specific exonuclease RecJ; EC=3.1.-.-; | chromosome | CDS | 266521 | 2115 | + | 0.269504 |
NA | BH0827 | ATP-dependent protease La | SubName: Full=ATP-dependent protease La; EC=3.4.21.53; | chromosome | CDS | 885294 | 2487 | - | 0.282268 |
NA | BH0745 | endonuclease III | RecName: Full=Endonuclease III; EC=4.2.99.18; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase; | chromosome | CDS | 800065 | 636 | + | 0.259434 |
NA | BH0457 | excinuclease ABC subunit C | RecName: Full=UvrABC system protein C; Short=Protein UvrC; AltName: Full=Excinuclease ABC subunit C; | chromosome | CDS | 480629 | 1809 | - | 0.272526 |
NA | BH0837 | excinuclease ABC subunit A | RecName: Full=UvrABC system protein A; Short=UvrA protein; AltName: Full=Excinuclease ABC subunit A; | chromosome | CDS | 906145 | 2841 | + | 0.335797 |
NA | BH0455 | hypothetical cytosolic protein | SubName: Full=Hypothetical cytosolic protein; | chromosome | CDS | 479552 | 984 | + | 0.240854 |
NA | BH0438 | DNA polymerase III, beta chain | SubName: Full=DNA polymerase III, beta chain; EC=2.7.7.7; | chromosome | CDS | 461913 | 1161 | + | 0.306632 |
NA | BH0211 | DNA mismatch repair protein MutL | RecName: Full=DNA mismatch repair protein MutL; | chromosome | CDS | 214488 | 1839 | + | 0.290375 |
NA | BH0022 | Holliday junction DNA helicase RuvB | RecName: Full=Holliday junction ATP-dependent DNA helicase RuvB; EC=3.6.4.12; | chromosome | CDS | 21363 | 1059 | - | 0.344665 |
NA | BH0114 | single-strand DNA binding protein | RecName: Full=Single-stranded DNA-binding protein; | chromosome | CDS | 111757 | 438 | - | 0.356164 |
NA | BH0023 | Holliday junction DNA helicase RuvA | RecName: Full=Holliday junction ATP-dependent DNA helicase RuvA; EC=3.6.4.12; | chromosome | CDS | 22473 | 591 | - | 0.304569 |
NA | BH0633 | exodeoxyribonuclease V beta chain | SubName: Full=Exodeoxyribonuclease V beta chain; EC=3.1.11.5; | chromosome | CDS | 671676 | 3474 | - | 0.259643 |
NA | BH0035 | hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 32023 | 1884 | - | 0.29724 |
NA | BH0830 | exonuclease SbcC | SubName: Full=Exonuclease SbcC; EC=3.1.11.-; | chromosome | CDS | 891528 | 2937 | + | 0.266599 |
NA | BH0014 | primosomal protein N' | SubName: Full=Primosomal protein N; | chromosome | CDS | 13047 | 1977 | + | 0.274659 |
NA | BH0632 | exodeoxyribonuclease V alpha chain | SubName: Full=Exodeoxyribonuclease V alpha chain; EC=3.1.11.5; | chromosome | CDS | 669840 | 1827 | - | 0.252874 |
NA | BH0623 | transcription-repair coupling factor | RecName: Full=Transcription-repair-coupling factor; Short=TRCF; EC=3.6.4.-; | chromosome | CDS | 657358 | 3369 | - | 0.28881 |
NA | BH0512 | hypothetical membrane associated protein | SubName: Full=Hypothetical membrane associated protein; | chromosome | CDS | 521700 | 7200 | + | 0.296667 |
NA | BH0828 | DNA topoisomerase I | RecName: Full=DNA topoisomerase 1; EC=5.99.1.2; AltName: Full=DNA topoisomerase I; | chromosome | CDS | 887784 | 2538 | - | 0.286446 |
NA | BH0111 | replicative DNA helicase | SubName: Full=Replicative DNA helicase; EC=3.6.1.-; | chromosome | CDS | 109543 | 1386 | - | 0.328283 |
NA | BH0232 | DNA-binding protein HbbU | SubName: Full=DNA-binding protein HbbU; | chromosome | CDS | 236831 | 327 | - | 0.299694 |
NA | BH0098 | MutS2 protein | RecName: Full=Endonuclease MutS2; EC=3.1.-.-; | chromosome | CDS | 94221 | 2361 | - | 0.276578 |
NA | BH0660A | hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 707266 | 357 | + | 0.322129 |
NA | BH0461 | DNA polymerase III subunit gamma/tau | SubName: Full=DNA polymerase III subunit gamma/tau; EC=2.7.7.7; | chromosome | CDS | 486982 | 1653 | + | 0.30611 |
NA | BH0534 | exodeoxyribonuclease III | SubName: Full=Exodeoxyribonuclease III; EC=3.1.11.2; | chromosome | CDS | 548758 | 762 | + | 0.325459 |
NA | BH0797 | DNA mismatch repair protein MutS | RecName: Full=DNA mismatch repair protein MutS; | chromosome | CDS | 852853 | 2586 | + | 0.300464 |
NA | BH0344 | DNA helicase II | SubName: Full=DNA helicase II; EC=3.6.1.-; | chromosome | CDS | 354735 | 2094 | - | 0.292264 |
NA | BH0829 | exonuclease SbcD | SubName: Full=Exonuclease SbcD; EC=3.1.11.-; | chromosome | CDS | 890396 | 1233 | + | 0.273317 |
NA | BH0548 | DNA polymerase I | SubName: Full=DNA polymerase I; EC=2.7.7.7; | chromosome | CDS | 566227 | 2718 | - | 0.29507 |
NA | BH0053 | uracil-DNA glycosylase | RecName: Full=Uracil-DNA glycosylase; Short=UDG; EC=3.2.2.27; | chromosome | CDS | 49033 | 672 | + | 0.297619 |
NA | BH0206 | methyltransferase | SubName: Full=Methyltransferase; EC=2.1.1.-; | chromosome | CDS | 207140 | 573 | - | 0.322862 |
NA | BH0422 | putative 3-methyladenine DNA glycosylase | RecName: Full=Putative 3-methyladenine DNA glycosylase; EC=3.2.2.-; | chromosome | CDS | 445895 | 597 | - | 0.319933 |
NA | BH0131 | RecA protein | RecName: Full=Protein RecA; AltName: Full=Recombinase A; | chromosome | CDS | 127022 | 1071 | - | 0.358543 |
NA | BH0046 | ribonuclease HII | RecName: Full=Ribonuclease HII; Short=RNase HII; EC=3.1.26.4; | chromosome | CDS | 45193 | 546 | + | 0.285714 |
NA | BH0463A | modification methylase LlaDCHIA | SubName: Full=Modification methylase LlaDCHIA; EC=2.1.1.72; | chromosome | CDS | 490263 | 819 | + | 0.260073 |
NA | BH0690 | neutrophil-activating protein A | SubName: Full=Neutrophil-activating protein A; | chromosome | CDS | 737405 | 534 | + | 0.286517 |
NA | BH0437 | chromosomal replication initiator protein DnaA | RecName: Full=Chromosomal replication initiator protein DnaA; | chromosome | CDS | 460217 | 1455 | + | 0.282474 |
NA | BH0436 | DNA gyrase subunit B | RecName: Full=DNA gyrase subunit B; EC=5.99.1.3; | chromosome | CDS | 458066 | 1920 | - | 0.342187 |
NA | BH0036 | hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 33906 | 1797 | - | 0.30384 |
NA | BH0194 | sec-independent protein translocase protein TatD | SubName: Full=Sec-independent protein translocase protein TatD; EC=3.1.21.-; | chromosome | CDS | 190322 | 798 | - | 0.279449 |
NA | BH0297 | Smf protein | SubName: Full=Smf protein; | chromosome | CDS | 308358 | 945 | - | 0.313228 |
NA | BH0438A | DNA replication and repair protein RecF | RecName: Full=DNA replication and repair protein RecF; | chromosome | CDS | 463093 | 1068 | + | 0.285581 |
NA | BH0435 | DNA gyrase subunit A | RecName: Full=DNA gyrase subunit A; EC=5.99.1.3; | chromosome | CDS | 455622 | 2433 | - | 0.325113 |
NA | BH0710 | DNA primase | RecName: Full=DNA primase; EC=2.7.7.-; | chromosome | CDS | 753658 | 1782 | + | 0.309764 |
NA | BH0552 | NAD-dependent DNA ligase | RecName: Full=DNA ligase; EC=6.5.1.2; AltName: Full=Polydeoxyribonucleotide synthase [NAD(+)]; | chromosome | CDS | 570356 | 2010 | + | 0.318408 |
NA | BH0765 | DNA polymerase III subunit gamma/tau | SubName: Full=DNA polymerase III subunit gamma/tau; EC=2.7.7.7; | chromosome | CDS | 818404 | 1044 | - | 0.23659 |
NA | BH0579 | DNA polymerase III alpha subunit | SubName: Full=DNA polymerase III alpha subunit; EC=2.7.7.7; | chromosome | CDS | 602478 | 3444 | + | 0.324913 |
NA | BH0581 | ATP-dependent DNA helicase RecG | SubName: Full=ATP-dependent DNA helicase RecG; EC=3.6.1.-; | chromosome | CDS | 606514 | 2064 | + | 0.305717 |