Gene list
Applied filters:
COG category: Replication, recombination and repair
Organism: Borrelia duttonii Ly, Ly
Number of genes found: 72
Hide UniProt / TrEMBL protein name | View in Fasta format (DNA) | View in Fasta format (Protein) | ||||
Borrelia duttonii Ly, Ly | |||||||||
---|---|---|---|---|---|---|---|---|---|
Name | Locus tag | Product / Description | UniProt / TrEMBL protein name | Genomic element | Type | Begin | Length | Strand | GC-content |
NA | BDU_212 | uncharacterized conserved protein | SubName: Full=Uncharacterized conserved protein; | chromosome | CDS | 228101 | 1041 | + | 0.210375 |
NA | BDU_206 | N6-adenine-specific methylase | SubName: Full=N6-adenine-specific methylase; | chromosome | CDS | 218486 | 630 | - | 0.25873 |
NA | BDU_2003 | uncharacterized conserved protein | SubName: Full=Uncharacterized conserved protein; | pl70 | CDS | 3145 | 3390 | - | 0.346608 |
NA | BDU_747 | antigen, p83/100 | SubName: Full=Antigen, p83/100; | chromosome | CDS | 801510 | 2250 | + | 0.292 |
NA | BDU_769 | DNA polymerase III gamma and tau subunit | SubName: Full=DNA polymerase III gamma and tau subunit; EC=2.7.7.7; | chromosome | CDS | 822306 | 1044 | - | 0.215517 |
NA | BDU_19 | uncharacterized conserved protein | SubName: Full=Uncharacterized conserved protein; | chromosome | CDS | 24184 | 570 | + | 0.208772 |
NA | BDU_1120 | transposase-like protein | SubName: Full=Transposase-like protein; | pl165 | CDS | 132960 | 420 | + | 0.259524 |
NA | BDU_1045 | transposase IS605 OrfB | SubName: Full=Transposase IS605 OrfB; | pl165 | CDS | 52669 | 1134 | + | 0.269841 |
NA | BDU_16001 | antigen P35-like protein, lipoprotein | SubName: Full=Antigen P35-like protein, lipoprotein; | pl11 | CDS | 974 | 852 | + | 0.284038 |
NA | BDU_15004 | transposase IS605 OrfB | SubName: Full=Transposase IS605 OrfB; | pl15 | CDS | 3234 | 1140 | + | 0.269298 |
NA | BDU_740 | ATP-dependent helicase, DinG family | SubName: Full=ATP-dependent helicase, DinG family; | chromosome | CDS | 790784 | 2055 | - | 0.241849 |
NA | BDU_467 | putative adenine-specific DNA methyltransferase | SubName: Full=Putative adenine-specific DNA methyltransferase; EC=2.1.1.72; | chromosome | CDS | 498299 | 825 | + | 0.24 |
NA | BDU_1038 | transposase IS605 OrfB | SubName: Full=Transposase IS605 OrfB; | pl165 | CDS | 44905 | 1140 | - | 0.276316 |
NA | BDU_232 | HbbU protein | SubName: Full=HbbU protein; | chromosome | CDS | 248520 | 327 | - | 0.302752 |
NA | BDU_192 | Tatd, Mg-dependent DNase | SubName: Full=Tatd, Mg-dependent DNase; EC=3.1.21.-; | chromosome | CDS | 201669 | 798 | - | 0.25188 |
NA | BDU_1119 | transposase IS605 OrfB | SubName: Full=Transposase IS605 OrfB; | pl165 | CDS | 131793 | 1134 | - | 0.268959 |
NA | BDU_1129 | transposase IS605 OrfB | SubName: Full=Transposase IS605 OrfB; | pl165 | CDS | 141539 | 1134 | + | 0.276896 |
NA | BDU_454 | DNA polymerase III delta subunit | SubName: Full=DNA polymerase III delta subunit; EC=2.7.7.7; | chromosome | CDS | 487584 | 984 | + | 0.24187 |
bdr | BDU_11008 | bdr protein | SubName: Full=Bdr protein; | pl27 | CDS | 6372 | 552 | + | 0.275362 |
bdr_1 | BDU_9025 | bdr protein | SubName: Full=Bdr protein; | pl31 | CDS | 20759 | 639 | + | 0.255086 |
bppC | BDU_10010 | BppC | SubName: Full=BppC; | pl28 | CDS | 8020 | 753 | - | 0.250996 |
bppC | BDU_11004 | BppC | SubName: Full=BppC; | pl27 | CDS | 2699 | 753 | - | 0.24834 |
bppC | BDU_12008 | BppC | SubName: Full=BppC; | pl26 | CDS | 6328 | 753 | - | 0.252324 |
dnaA | BDU_434 | chromosomal replication initiator protein | RecName: Full=Chromosomal replication initiator protein DnaA; | chromosome | CDS | 468262 | 1455 | + | 0.263918 |
dnaB | BDU_114 | replicative DNA helicase | SubName: Full=Replicative DNA helicase; EC=3.6.1.-; | chromosome | CDS | 120767 | 1395 | - | 0.308961 |
dnaE | BDU_582 | DNA polymerase III, subunit alpha | SubName: Full=DNA polymerase III, subunit alpha; EC=2.7.7.7; | chromosome | CDS | 609216 | 3435 | + | 0.303639 |
dnaG | BDU_714 | DNA primase | RecName: Full=DNA primase; EC=2.7.7.-; | chromosome | CDS | 758553 | 1776 | + | 0.265203 |
dnaN | BDU_435 | DNA polymerase III, subunit beta | SubName: Full=DNA polymerase III, subunit beta; EC=2.7.7.7; | chromosome | CDS | 469980 | 1161 | + | 0.289406 |
dnaX | BDU_463 | DNA polymerase III, subunits gamma and tau | SubName: Full=DNA polymerase III, subunits gamma and tau; EC=2.7.7.7; | chromosome | CDS | 494903 | 1668 | + | 0.294964 |
exoA | BDU_531 | exodeoxyribonuclease III | SubName: Full=Exodeoxyribonuclease III; EC=3.1.11.2; | chromosome | CDS | 555734 | 765 | + | 0.288889 |
gyrA | BDU_432 | DNA gyrase, subunit A | RecName: Full=DNA gyrase subunit A; EC=5.99.1.3; | chromosome | CDS | 463666 | 2448 | - | 0.319036 |
gyrB | BDU_433 | DNA gyrase, subunit B | RecName: Full=DNA gyrase subunit B; EC=5.99.1.3; | chromosome | CDS | 466110 | 1920 | - | 0.317708 |
hrpA | BDU_839 | ATP-dependent helicase | SubName: Full=ATP-dependent helicase; | chromosome | CDS | 894154 | 2487 | - | 0.267793 |
lig | BDU_554 | DNA ligase | RecName: Full=DNA ligase; EC=6.5.1.2; AltName: Full=Polydeoxyribonucleotide synthase [NAD(+)]; | chromosome | CDS | 577489 | 2010 | + | 0.281095 |
mag | BDU_421 | 3-methyladenine DNA glycosylase | RecName: Full=Putative 3-methyladenine DNA glycosylase; EC=3.2.2.-; | chromosome | CDS | 455468 | 591 | - | 0.279188 |
mfd | BDU_627 | transcription-repair coupling factor | RecName: Full=Transcription-repair-coupling factor; Short=TRCF; EC=3.6.4.-; | chromosome | CDS | 663116 | 3378 | - | 0.2537 |
mutL | BDU_211 | DNA mismatch repair protein | RecName: Full=DNA mismatch repair protein MutL; | chromosome | CDS | 226245 | 1836 | + | 0.260893 |
mutS_1 | BDU_101 | DNA mismatch repair protein MutS | RecName: Full=Endonuclease MutS2; EC=3.1.-.-; | chromosome | CDS | 105498 | 2361 | - | 0.264295 |
mutS_2 | BDU_805 | DNA mismatch repair protein | SubName: Full=DNA mismatch repair protein; | chromosome | CDS | 856675 | 2589 | + | 0.26883 |
napA_2 | BDU_694 | neutrophil activating protein | SubName: Full=Neutrophil activating protein; | chromosome | CDS | 742781 | 504 | + | 0.257937 |
nth | BDU_750 | endonuclease III | RecName: Full=Endonuclease III; EC=4.2.99.18; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase; | chromosome | CDS | 804099 | 618 | + | 0.263754 |
parC | BDU_40 | DNA topoisomerase IV, A subunit | SubName: Full=DNA topoisomerase IV, A subunit; EC=5.99.1.-; | chromosome | CDS | 43235 | 1884 | - | 0.268047 |
parE | BDU_41 | DNA topoisomerase IV, B subunit | SubName: Full=DNA topoisomerase IV, B subunit; EC=5.99.1.-; | chromosome | CDS | 45118 | 1797 | - | 0.284919 |
polA | BDU_550 | DNA polymerase I | SubName: Full=DNA polymerase I; EC=2.7.7.7; | chromosome | CDS | 573324 | 2769 | - | 0.263633 |
priA | BDU_20 | primosomal protein N | SubName: Full=Primosomal protein N; | chromosome | CDS | 24746 | 1977 | + | 0.249368 |
recA | BDU_135 | recA protein | RecName: Full=Protein RecA; AltName: Full=Recombinase A; | chromosome | CDS | 138361 | 1092 | - | 0.343407 |
recB | BDU_637 | exodeoxyribonuclease V, beta chain | SubName: Full=Exodeoxyribonuclease V, beta chain; EC=3.1.11.5; | chromosome | CDS | 677379 | 3444 | - | 0.228513 |
recC | BDU_638 | exodeoxyribonuclease V, gamma chain | SubName: Full=Exodeoxyribonuclease V, gamma chain; EC=3.1.11.5; | chromosome | CDS | 680829 | 3213 | - | 0.222533 |
recD | BDU_636 | exodeoxyribonuclease V, alpha chain | SubName: Full=Exodeoxyribonuclease V, alpha chain; EC=3.1.11.5; | chromosome | CDS | 675544 | 1827 | - | 0.230432 |
recF | BDU_436 | DNA replication and repair protein RecF | RecName: Full=DNA replication and repair protein RecF; | chromosome | CDS | 471161 | 1068 | + | 0.263109 |
recG | BDU_584 | DNA recombinase | SubName: Full=DNA recombinase; EC=3.6.1.-; | chromosome | CDS | 613244 | 2064 | + | 0.291667 |
recJ | BDU_257 | single-stranded-DNA-specific exonuclease | SubName: Full=Single-stranded-DNA-specific exonuclease; EC=3.1.-.-; | chromosome | CDS | 277935 | 2157 | + | 0.240612 |
recN | BDU_313 | ATPase involved in DNA repair | SubName: Full=ATPase involved in DNA repair; | chromosome | CDS | 332210 | 1587 | - | 0.230624 |
recR | BDU_465 | recombination protein RecR | RecName: Full=Recombination protein RecR; | chromosome | CDS | 496876 | 585 | + | 0.295727 |
rnhB | BDU_50 | ribonuclease H | RecName: Full=Ribonuclease HII; Short=RNase HII; EC=3.1.26.4; | chromosome | CDS | 56477 | 546 | + | 0.294872 |
ruvA | BDU_29 | Holliday junction DNA helicase | RecName: Full=Holliday junction ATP-dependent DNA helicase RuvA; EC=3.6.4.12; | chromosome | CDS | 34158 | 591 | - | 0.265651 |
ruvB | BDU_28 | Holliday junction DNA helicase | RecName: Full=Holliday junction ATP-dependent DNA helicase RuvB; EC=3.6.4.12; | chromosome | CDS | 33083 | 1023 | - | 0.324536 |
sbcC | BDU_842 | exonuclease SbcC | SubName: Full=Exonuclease SbcC; | chromosome | CDS | 900477 | 2856 | + | 0.244748 |
sbcD | BDU_841 | exonuclease SbcD | SubName: Full=Exonuclease SbcD; | chromosome | CDS | 899258 | 1233 | + | 0.262774 |
smf | BDU_300 | smf protein | SubName: Full=Smf protein; | chromosome | CDS | 319848 | 945 | - | 0.301587 |
ssb | BDU_9010 | single stranded DNA-binding protein | RecName: Full=Single-stranded DNA-binding protein; | pl31 | CDS | 8004 | 474 | - | 0.305907 |
ssb | BDU_12006 | single-stranded DNA-binding protein | RecName: Full=Single-stranded DNA-binding protein; | pl26 | CDS | 4970 | 480 | + | 0.327083 |
ssb | BDU_11002 | single-stranded DNA-binding protein | RecName: Full=Single-stranded DNA-binding protein; | pl27 | CDS | 1591 | 426 | + | 0.305164 |
ssb | BDU_5021 | single-stranded DNA-binding protein | RecName: Full=Single-stranded DNA-binding protein; | pl40 | CDS | 19626 | 462 | - | 0.292208 |
ssb | BDU_117 | single-stranded DNA-binding protein | RecName: Full=Single-stranded DNA-binding protein; | chromosome | CDS | 122991 | 441 | - | 0.326531 |
ssb | BDU_10008 | single-stranded DNA-binding protein | RecName: Full=Single-stranded DNA-binding protein; | pl28 | CDS | 6755 | 444 | + | 0.317568 |
topA | BDU_840 | DNA topoisomerase I | RecName: Full=DNA topoisomerase 1; EC=5.99.1.2; AltName: Full=DNA topoisomerase I; | chromosome | CDS | 896644 | 2538 | - | 0.270686 |
ung | BDU_57 | uracil DNA glycosylase | RecName: Full=Uracil-DNA glycosylase; Short=UDG; EC=3.2.2.27; | chromosome | CDS | 60290 | 672 | + | 0.293155 |
uvrA | BDU_850 | excinuclease ABC, subunit A | RecName: Full=UvrABC system protein A; Short=UvrA protein; AltName: Full=Excinuclease ABC subunit A; | chromosome | CDS | 915016 | 2841 | + | 0.31503 |
uvrB | BDU_849 | excinuclease ABC, subunit B | RecName: Full=UvrABC system protein B; Short=Protein UvrB; AltName: Full=Excinuclease ABC subunit B; | chromosome | CDS | 913024 | 1965 | + | 0.298219 |
uvrC | BDU_455 | excinuclease ABC, subunit C | RecName: Full=UvrABC system protein C; Short=Protein UvrC; AltName: Full=Excinuclease ABC subunit C; | chromosome | CDS | 488571 | 1809 | - | 0.249309 |
uvrD | BDU_343 | DNA helicase | SubName: Full=DNA helicase; EC=3.6.1.-; | chromosome | CDS | 365704 | 2097 | - | 0.269433 |