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2024-05-20 22:09:05

Gene list

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COG category: Replication, recombination and repair
Genomic element: PKO-g-P-chrIn1v1.w1

Number of genes found: 48

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Show UniProt / TrEMBL protein name View in Fasta format (DNA) View in Fasta format (Protein)  

 
Borrelia afzelii, PKo
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
NA BAPKO_0478 conserved hypothetical proteinPKO-g-P-chrIn1v1.w1 CDS478533 972 + 0.223251
NA BAPKO_0196 conserved hypothetical proteinPKO-g-P-chrIn1v1.w1 CDS190968 807 - 0.277571
NA BAPKO_0099 DNA mismatch repair protein, putativePKO-g-P-chrIn1v1.w1 CDS94347 2337 - 0.260163
NA BAPKO_0667 small primase-like proteinPKO-g-P-chrIn1v1.w1 CDS660772 546 - 0.245421
NA BAPKO_0813 hypothetical proteinPKO-g-P-chrIn1v1.w1 CDS810397 1047 - 0.222541
NA BAPKO_0213 conserved hypothetical proteinPKO-g-P-chrIn1v1.w1 CDS207485 570 - 0.268421
dnaA BAPKO_0459 chromosomal replication initiator proteinPKO-g-P-chrIn1v1.w1 CDS460469 1458 + 0.283951
dnaB BAPKO_0112 replicative DNA helicasePKO-g-P-chrIn1v1.w1 CDS109328 1368 - 0.305556
dnaE BAPKO_0610 DNA polymerase III, subunit alphaPKO-g-P-chrIn1v1.w1 CDS596216 3486 + 0.3035
dnaG BAPKO_0755 DNA primasePKO-g-P-chrIn1v1.w1 CDS750141 1782 + 0.26936
dnaN BAPKO_0460 DNA polymerase III, subunit betaPKO-g-P-chrIn1v1.w1 CDS462159 1161 + 0.26615
dnaX BAPKO_0490 DNA polymerase III, subunits gamma and tauPKO-g-P-chrIn1v1.w1 CDS486587 1701 + 0.292181
exoA BAPKO_0559 exodeoxyribonuclease IIIPKO-g-P-chrIn1v1.w1 CDS546959 768 + 0.285156
gyrA BAPKO_0457 DNA gyrase, subunit APKO-g-P-chrIn1v1.w1 CDS455934 2433 - 0.312783
gyrB BAPKO_0458 DNA gyrase, subunit BPKO-g-P-chrIn1v1.w1 CDS458378 1905 - 0.31811
hbb BAPKO_0241 hbbU proteinPKO-g-P-chrIn1v1.w1 CDS236539 327 - 0.311927
hrpA BAPKO_0880 ATP-dependent helicasePKO-g-P-chrIn1v1.w1 CDS873629 2472 - 0.282362
lig BAPKO_0581 DNA ligasePKO-g-P-chrIn1v1.w1 CDS565973 1983 + 0.278366
mag BAPKO_0442 3-methyladenine DNA glycosylasePKO-g-P-chrIn1v1.w1 CDS444880 561 - 0.306595
mfd BAPKO_0663 transcription-repair coupling factorPKO-g-P-chrIn1v1.w1 CDS654189 3375 - 0.261333
mutL BAPKO_0218 DNA mismatch repair proteinPKO-g-P-chrIn1v1.w1 CDS214514 1836 + 0.270153
mutS BAPKO_0850 DNA mismatch repair proteinPKO-g-P-chrIn1v1.w1 CDS843020 2589 + 0.277327
napA-2 BAPKO_0735 neutrophil activating proteinPKO-g-P-chrIn1v1.w1 CDS734984 531 + 0.278719
nth BAPKO_0791 endonuclease IIIPKO-g-P-chrIn1v1.w1 CDS792921 645 + 0.272868
parC BAPKO_0035 DNA topoisomerase IVPKO-g-P-chrIn1v1.w1 CDS31948 1881 - 0.275917
parE BAPKO_0036 DNA topoisomerase IVPKO-g-P-chrIn1v1.w1 CDS33828 1800 - 0.292222
polA BAPKO_0577 DNA polymerase IPKO-g-P-chrIn1v1.w1 CDS561792 2670 - 0.282772
priA BAPKO_0013 primosomal protein NPKO-g-P-chrIn1v1.w1 CDS12503 1992 + 0.251506
recA BAPKO_0133 recA proteinPKO-g-P-chrIn1v1.w1 CDS125964 1098 - 0.359745
recB BAPKO_0676 exodeoxyribonuclease V, beta chainPKO-g-P-chrIn1v1.w1 CDS668766 3513 - 0.235981
recC BAPKO_0677 exodeoxyribonuclease V, gamma chainPKO-g-P-chrIn1v1.w1 CDS672284 3240 - 0.223148
recD BAPKO_0675 exodeoxyribonuclease V, alpha chainPKO-g-P-chrIn1v1.w1 CDS666937 1833 - 0.237316
recG BAPKO_0612 DNA recombinasePKO-g-P-chrIn1v1.w1 CDS600301 2061 + 0.311984
recJ BAPKO_0264 single-stranded-DNA-specific exonucleasePKO-g-P-chrIn1v1.w1 CDS262898 2121 + 0.247996
rep BAPKO_0640 rep helicase, single-stranded DNA-dependent ATPasePKO-g-P-chrIn1v1.w1 CDS636254 1980 + 0.267172
rnhB BAPKO_0046 ribonuclease HPKO-g-P-chrIn1v1.w1 CDS45227 546 + 0.272894
ruvA BAPKO_0022 Holliday junction DNA helicasePKO-g-P-chrIn1v1.w1 CDS21959 591 - 0.287648
ruvB BAPKO_0021 Holliday junction DNA helicasePKO-g-P-chrIn1v1.w1 CDS20856 1044 - 0.338123
sbcC BAPKO_0883 exonuclease SbcCPKO-g-P-chrIn1v1.w1 CDS879956 2841 + 0.253432
sbcD BAPKO_0882 exonuclease SbcDPKO-g-P-chrIn1v1.w1 CDS878728 1242 + 0.266506
smf BAPKO_0307 smf proteinPKO-g-P-chrIn1v1.w1 CDS304544 948 - 0.297468
ssb BAPKO_0115 single-stranded DNA-binding proteinPKO-g-P-chrIn1v1.w1 CDS111542 450 - 0.293333
topA BAPKO_0881 DNA topoisomerase IPKO-g-P-chrIn1v1.w1 CDS876103 2550 - 0.281569
ung BAPKO_0053 uracil DNA glycosylasePKO-g-P-chrIn1v1.w1 CDS49108 672 + 0.276786
uvrA BAPKO_0890 excinuclease ABC, subunit APKO-g-P-chrIn1v1.w1 CDS893869 2853 + 0.318962
uvrB BAPKO_0889 excinuclease ABC, subunit BPKO-g-P-chrIn1v1.w1 CDS891858 1995 + 0.310276
uvrC BAPKO_0481 excinuclease ABC, subunit CPKO-g-P-chrIn1v1.w1 CDS480235 1728 - 0.271412
uvrD BAPKO_0353 DNA helicasePKO-g-P-chrIn1v1.w1 CDS350147 2097 - 0.266094