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2024-05-11 07:00:11

Gene list

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COG category: Cell wall/membrane biogenesis
Organism: Leptospira biflexa serovar Patoc strain Patoc 1 (Ames), Patoc 1 (Ames)

Number of genes found: 206

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Leptospira biflexa serovar Patoc strain Patoc 1 (Ames), Patoc 1 (Ames)
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
NA LBF_1957 Glycosyltransferasechromosome I CDS2096434 1212 - 0.314356
NA LBF_0301 DltB-related membrane proteinchromosome I CDS314504 1557 + 0.385999
NA LBF_0506 Hypothetical proteinchromosome I CDS529519 918 + 0.424837
NA LBF_1449 Cell wall-associated hydrolasechromosome I CDS1569169 1263 + 0.399842
NA LBF_1984 N-acetyl glucosamine/N-acetyl galactosamine epimerasechromosome I CDS2123625 1008 - 0.373016
NA LBF_4128 Nucleoside-diphosphate sugar epimerasechromosome II CDS127311 1884 - 0.397028
NA LBF_2966 Cell division protein FtsI/penicillin-binding proteinchromosome I CDS3192936 1938 + 0.416409
NA LBF_1979 Glycosyltransferasechromosome I CDS2118041 915 - 0.340984
NA LBF_3311 Metallopeptidasechromosome I CDS3555525 975 - 0.366154
NA LBF_0679 Metalloendopeptidasechromosome I CDS717739 1209 + 0.344913
NA LBF_3151 Glycosyltransferasechromosome I CDS3386268 1050 + 0.32
NA LBF_3069 Nucleoside-diphosphate-sugar epimerasechromosome I CDS3300919 1077 + 0.379759
NA LBF_3334 Glycosyltransferasechromosome I CDS3581312 1170 + 0.381197
NA LBF_1942 Glycosyltransferasechromosome I CDS2080247 1140 - 0.346491
NA LBF_2834 M23/M37 family peptidasechromosome I CDS3037753 915 + 0.396721
NA LBF_0105 Nucleoside-diphosphate-sugar epimerasechromosome I CDS110392 969 + 0.342621
NA LBF_1948 Glycosyltransferasechromosome I CDS2087058 1221 - 0.326781
NA LBF_0658 Penicillin binding protein/Beta-lactamase class C proteinchromosome I CDS693950 1989 + 0.408245
NA LBF_2212 glycosyltransferasechromosome I CDS2351955 1620 + 0.348148
NA LBF_3351 OmpA-family proteinchromosome I CDS3592926 1272 - 0.366352
NA LBF_0652 Glycosyltransferasechromosome I CDS686062 1107 - 0.386631
NA LBF_0949 Glycosyltransferase of PMT familychromosome I CDS1021870 1464 - 0.372268
NA LBF_0212 Metalloendoproteasechromosome I CDS213341 1014 - 0.382643
NA LBF_4045 Transglycosylasechromosome II CDS45922 636 - 0.441824
NA LBF_4245 DltB-related membrane proteinchromosome II CDS247420 1497 + 0.354041
NA LBF_0981 undecaprenol-phosphate transfer proteinchromosome I CDS1064678 1428 - 0.408263
NA LBF_2768 NDP-sugar dehydratase or epimerasechromosome I CDS2971315 963 + 0.393562
NA LBF_0373 Fasciclin domain proteinchromosome I CDS391070 600 - 0.426667
NA LBF_1587 Glycosyltransferasechromosome I CDS1718278 1140 + 0.387719
NA LBF_3152 Glycosyltransferasechromosome I CDS3387323 1182 + 0.335025
NA LBF_2893 Nucleoside-diphosphate-sugar epimerasechromosome I CDS3112196 849 + 0.398115
NA LBF_1594 ADP-heptose synthase, adenylyltransferase componentchromosome I CDS1724810 489 + 0.390593
NA LBF_0783 Acyltransferasechromosome I CDS833615 1398 + 0.32618
NA LBF_2702 Conserved hypothetical proteinchromosome I CDS2892066 771 - 0.35668
NA LBF_0673 Pyridoxal phosphate-dependent aminotransferasechromosome I CDS712302 1095 + 0.378082
NA LBF_3295 Sugar phosphate isomerasechromosome I CDS3538802 975 + 0.393846
NA LBF_2265 Peptidase family M23/M37chromosome I CDS2408128 1815 + 0.397796
NA LBF_1439 Lipocalinchromosome I CDS1560181 564 - 0.384752
NA LBF_1378 Membrane carboxypeptidase/Penicillin-binding proteinchromosome I CDS1500734 2553 - 0.443792
NA LBF_0930 OmpA-family proteinchromosome I CDS1005528 690 + 0.427536
NA LBF_2005 TolC-like proteinchromosome I CDS2152137 1542 + 0.427367
NA LBF_2987 DltB-related membrane proteinchromosome I CDS3217320 1371 + 0.324581
NA LBF_2868 Nucleoside-diphosphate-sugar epimerasechromosome I CDS3082462 693 - 0.411255
NA LBF_3051 OmpA-family proteinchromosome I CDS3281832 1428 + 0.408263
NA LBF_1947 Glycosyltransferasechromosome I CDS2086139 930 - 0.333333
NA LBF_0522 Actetyltransferasechromosome I CDS543055 1479 + 0.357674
NA LBF_1310 Phosphoglycerol transferase-related proteinchromosome I CDS1423773 1995 + 0.407519
NA LBF_0339 D-alanyl-D-alanine carboxypeptidasechromosome I CDS355578 801 + 0.37578
NA LBF_2990 TolC related proteinchromosome I CDS3220236 1332 + 0.331081
NA LBF_3126 OmpA-family proteinchromosome I CDS3359582 2013 - 0.405365
NA LBF_1680 Conserved hypothetical proteinchromosome I CDS1811534 2958 - 0.389452
NA LBF_1623 Metallopeptidasechromosome I CDS1749589 918 + 0.443355
NA LBF_2744 Glycosyltransferase plus another conserved domainchromosome I CDS2941086 1542 - 0.411154
NA LBF_0499 Glucose-1-phosphate thymidylyltransferasechromosome I CDS522735 1032 + 0.359496
NA LBF_1959 Sugar pyridoxal-phosphate-dependent aminotransferasechromosome I CDS2099089 1113 - 0.34142
NA LBF_1010 Transglycosylasechromosome I CDS1090864 2268 - 0.402557
NA LBF_0238 Metalloendopeptidasechromosome I CDS238441 768 - 0.449219
NA LBF_3220 Metalloendopeptidasechromosome I CDS3451512 903 - 0.366556
NA LBF_0603 Metalloendoproteasechromosome I CDS635566 1554 - 0.381596
NA LBF_0172 DltB-related membrane proteinchromosome I CDS175392 1383 + 0.301518
NA LBF_4116 Bifunctional glycosyltransferase/sugar pyrophosphorylasechromosome II CDS113520 1476 + 0.368564
NA LBF_0967 O-antigen ligasechromosome I CDS1049929 1329 - 0.354402
NA LBF_0321 Conserved hypothetical proteinchromosome I CDS335549 2109 + 0.338549
NA LBF_1950 Glycosyltransferasechromosome I CDS2089785 912 - 0.347588
NA LBF_0196 TolC-related outermembrane proteinchromosome I CDS198716 1497 - 0.434202
NA LBF_1331 Metalloendopeptidasechromosome I CDS1446901 1002 - 0.457086
NA LBF_0051 Peptidase family M23/M37chromosome I CDS53496 1965 - 0.383206
NA LBF_4202 Cyclopropane fatty acid synthase-related methyltransferasechromosome II CDS210748 1071 - 0.399627
NA LBF_1260 TolC related proteinchromosome I CDS1375763 1326 + 0.373303
NA LBF_2870 DltB-related membrane proteinchromosome I CDS3083546 1467 - 0.376278
NA LBF_2900 Membrane carboxypeptidase/penicillin-binding proteinchromosome I CDS3119654 2190 - 0.354338
NA LBF_2635 OmpA-family proteinchromosome I CDS2821126 546 - 0.391941
NA LBF_1956 Glycosyltransferasechromosome I CDS2095482 966 - 0.312629
NA LBF_1985 Nucleoside-diphosphate-sugar epimerasechromosome I CDS2124644 957 - 0.402299
NA LBF_1818 OmpA-family proteinchromosome I CDS1969663 816 + 0.414216
NA LBF_1743 D-alanine--D-alanine ligasechromosome I CDS1878805 990 - 0.379798
NA LBF_2501 Mechanosensitive ion channelchromosome I CDS2675754 897 - 0.354515
NA LBF_3148 Nucleoside-diphosphate-sugar epimerasechromosome I CDS3383179 921 - 0.382193
NA LBF_0113 Nucleoside-diphosphate-sugar epimerasechromosome I CDS120733 966 - 0.400621
NA LBF_1083 Metallopeptidasechromosome I CDS1176871 786 - 0.455471
NA LBF_1857 ATP-grasp enzymechromosome I CDS2006522 1008 - 0.400794
NA LBF_0515 Membrane carboxypeptidase/penicillin-binding proteinchromosome I CDS535227 2118 + 0.398489
NA LBF_3354 Metalloendopeptidasechromosome I CDS3596739 990 + 0.39697
NA LBF_3130 RlpA-like lipoproteinchromosome I CDS3364514 882 + 0.422902
NA LBF_0971 Heptosyltransferasechromosome I CDS1054289 1056 - 0.411932
NA LBF_1945 Glycosyltransferasechromosome I CDS2084199 765 - 0.36732
NA LBF_0189 Glycosyltransferasechromosome I CDS192417 1080 + 0.410185
NA LBF_4242 Glycosyltransferasechromosome II CDS244429 1095 + 0.353425
NA LBF_0036 Peptidase, M50 familychromosome I CDS38309 930 + 0.366667
NA LBF_2899 Hydrolasechromosome I CDS3118039 1659 - 0.314045
NA LBF_0477 Penicillin binding protein/Beta-lactamase class C proteinchromosome I CDS497365 2049 - 0.362616
NA LBF_1736 ADP-heptosyltransferasechromosome I CDS1872788 1062 - 0.387006
NA LBF_2925 TolC-related proteinchromosome I CDS3151184 1356 - 0.365044
NA LBF_3150 Glycosyltransferasechromosome I CDS3385201 1071 + 0.345472
NA LBF_1649 Glycosyltransferasechromosome I CDS1779030 987 - 0.39615
NA LBF_0248 OmpA-family proteinchromosome I CDS250673 1047 + 0.377268
NA LBF_2315 DltB-related membrane proteinchromosome I CDS2461590 1431 + 0.381551
NA LBF_0831 Transglycosylasechromosome I CDS887790 666 + 0.423423
NA LBF_4213 hypothetical proteinchromosome II CDS223462 402 - 0.420398
NA LBF_1932 Nucleoside-diphosphate-sugar epimerasechromosome I CDS2065110 972 - 0.394033
NA LBF_3120 Nucleoside-diphosphate-sugar epimerasechromosome I CDS3353467 933 + 0.39657
NA LBF_0978 Membrane carboxypeptidase/penicillin-binding protein 1chromosome I CDS1060805 2424 + 0.431106
NA LBF_1111 Metallopeptidase, M23/M37 familychromosome I CDS1204175 654 - 0.38685
NA LBF_0423 Conserved hypothetical proteinchromosome I CDS437887 1872 + 0.380342
NA LBF_0179 CMP-KDO synthetase related proteinchromosome I CDS182752 1629 - 0.340086
NA LBF_0075 Nucleoside-diphosphate-sugar pyrophosphorylasechromosome I CDS79584 723 - 0.348548
NA LBF_1949 Glycosyltransferasechromosome I CDS2088262 1305 - 0.348659
NA LBF_1278 3-deoxy-D-manno-octulosonic-acid (KDO) transferasechromosome I CDS1392403 1278 - 0.399844
NA LBF_1765 DltB-related membrane proteinchromosome I CDS1904901 1425 - 0.346667
NA LBF_2861 Glycosyltransferasechromosome I CDS3073769 813 + 0.445264
NA LBF_1569 Glycosyltransferasechromosome I CDS1698542 822 + 0.391728
NA LBF_2582 OmpA-family proteinchromosome I CDS2768443 1857 - 0.416801
NA LBF_1965 Membrane protein of an ABC transporter complexchromosome I CDS2105094 876 - 0.31621
NA LBF_2790 Glycosyltransferasechromosome I CDS2988280 720 + 0.329167
NA LBF_0508 Penicillin binding proteinchromosome I CDS530759 1182 - 0.401861
NA LBF_2480 OmpA-family proteinchromosome I CDS2655055 480 + 0.347917
NA LBF_1971 pyridoxal-phosphate-dependent aminotransferasechromosome I CDS2111489 1275 - 0.356078
NA LBF_2213 Glycosyltransferasechromosome I CDS2353911 759 + 0.357049
NA LBF_2530 Zinc metalloproteasechromosome I CDS2709060 1707 - 0.398946
NA LBF_1016 Pyridoxal-phosphate-dependent aminotransferasechromosome I CDS1097043 1122 + 0.434938
NA LBF_0968 Glycosyltransferasechromosome I CDS1051307 1290 + 0.381395
NA LBF_2412 Nucleoside-diphosphate-sugar epimerasechromosome I CDS2578051 825 - 0.374545
NA LBF_4118 Glycosyltransferasechromosome II CDS116027 723 + 0.35823
NA LBF_3040 OmpA-family lipoproteinchromosome I CDS3271833 570 - 0.421053
NA LBF_4110 Cyclopropane fatty acid synthase-related methyltransferasechromosome II CDS108064 1191 + 0.376994
NA LBF_0678 Metalloendopeptidasechromosome I CDS716537 1206 + 0.364842
NA LBF_0808 Glycosyltransferasechromosome I CDS857637 843 - 0.359431
NA LBF_4117 Nucleoside-diphosphate-sugar epimerasechromosome II CDS114985 1041 + 0.384246
NA LBF_0959 Hypothetical proteinchromosome I CDS1031869 615 + 0.320325
NA LBF_3276 TolC related proteinchromosome I CDS3522073 1428 + 0.366246
NA LBF_2483 Glycosyltransferasechromosome I CDS2657359 726 - 0.366391
NA LBF_4264 DltB-related membrane proteinchromosome II CDS271916 1479 - 0.40027
NA LBF_3293 Hypothetical proteinchromosome I CDS3537716 564 + 0.41844
NA LBF_1314 Glycosyltransferase of PMT familychromosome I CDS1428614 1707 + 0.391916
NA LBF_0902 Membrane protein of an ABC transporter complexchromosome I CDS973288 750 + 0.396
NA LBF_1939 Glycosyltransferasechromosome I CDS2076221 990 - 0.387879
NA LBF_2048 Poly-gamma-glutamate biosynthesischromosome I CDS2200804 1143 - 0.388451
NA LBF_1944 Glycosyltransferasechromosome I CDS2083334 795 - 0.376101
NA LBF_0709 Sugar phosphotransferasechromosome I CDS752366 1080 - 0.366667
NA LBF_1593 ADP-heptose synthase, sugar kinase componentchromosome I CDS1723794 1020 + 0.408824
NA LBF_1973 CMP-KDO synthetase related proteinchromosome I CDS2113753 750 - 0.350667
NA LBF_1679 Bifunctional glycosyl transferase/glycosyl epimerasechromosome I CDS1810120 1401 - 0.347609
NA LBF_1583 Oma87-like outer membrane proteinchromosome I CDS1711885 2877 + 0.380605
NA LBF_0143 TonB-related proteinchromosome I CDS146303 597 - 0.432161
alr LBF_4162 Alanine racemasechromosome II CDS163982 1131 + 0.431477
amiA LBF_2081 N-acetylmuramoyl-L-alanine amidasechromosome I CDS2232464 1113 - 0.422282
capA LBF_0020 Poly-gamma-glutamate biosynthesis proteinchromosome I CDS21123 1005 - 0.357214
capB LBF_0474 Capsule biosynthesis proteinchromosome I CDS493264 1197 - 0.375104
dapA LBF_0710 Dihydrodipicolinate synthase/N-acetylneuraminate lyasechromosome I CDS753523 885 + 0.437288
ddlA LBF_1808 D-alanine--D-alanine ligasechromosome I CDS1958872 1050 - 0.422857
ddpX LBF_3060 D-alanyl-D-alanine dipeptidasechromosome I CDS3291198 750 - 0.389333
galE LBF_0340 UDP-glucose 4-epimerasechromosome I CDS356373 969 - 0.395253
gcpE LBF_1231 Deoxyxylulose biosynthesis proteinchromosome I CDS1345389 2028 - 0.424556
gidB LBF_3360 Glucose inhibited division protein Bchromosome I CDS3602013 744 - 0.383065
glf LBF_1946 UDP-galactopyranose mutasechromosome I CDS2085018 1125 - 0.368889
glmS LBF_0498 Glucosamine 6-phosphate synthetasechromosome I CDS520896 1836 + 0.405773
glmU LBF_0230 UDP-N-acetylglucosamine diphosphorylasechromosome I CDS232096 762 - 0.42126
gmd LBF_0161 GDP-mannose 4,6-dehydratasechromosome I CDS165188 1017 + 0.406096
hemL-1 LBF_1980 Glutamate-1-semialdehyde aminotransferasechromosome I CDS2118952 2028 - 0.380178
kdsA LBF_1596 3-deoxy-8-phosphooctulonate synthasechromosome I CDS1726986 846 + 0.420804
kdsB-1 LBF_0194 3-deoxy-manno-octulosonate cytidylyltransferasechromosome I CDS195897 741 + 0.45749
lgt LBF_1329 Prolipoprotein diacylglyceryltransferasechromosome I CDS1445192 927 - 0.428263
lnt LBF_2592 Apolipoprotein N-acyltransferasechromosome I CDS2778727 1764 - 0.380952
lnt-1 LBF_0851 Apolipoprotein N-acyltransferasechromosome I CDS909271 1623 - 0.386938
lnt-2 LBF_2371 Apolipoprotein N-acyltransferasechromosome I CDS2524225 1446 - 0.372752
lolA-1 LBF_1340 Outer membrane lipoprotein-sorting proteinchromosome I CDS1459155 702 + 0.397436
lolA-2 LBF_1089 Outer membrane lipoprotein-sorting proteinchromosome I CDS1184874 582 - 0.47079
lpxA LBF_0341 Acyl-[acyl-carrier-protein]--UDP-N- acetylglucosamine O-acyltransferasechromosome I CDS357338 807 - 0.418835
lpxB LBF_2009 Lipid-A-disaccharide synthasechromosome I CDS2156244 1215 + 0.384362
lpxC LBF_1813 UDP-3-O-acyl-N-acetylglucosamine deacetylasechromosome I CDS1963933 909 + 0.478548
lpxD-1 LBF_0635 UDP-3-O-[3-hydroxymyristoyl] glucosamine N- acyltransferasechromosome I CDS667504 1059 - 0.429651
lpxD-2 LBF_2479 UDP-3-O-[3-hydroxymyristoyl] glucosamine N- acyltransferasechromosome I CDS2653934 1020 - 0.385294
lytB LBF_1537 Penicillin tolerance proteinchromosome I CDS1669197 948 - 0.418776
manC LBF_0462 Mannose-1-phosphate guanylyltransferase (GDP)chromosome I CDS480227 1071 + 0.422035
mdoB LBF_0537 Phosphatidylglycerol--membrane-oligosaccharideglycerophosphotransferasechromosome I CDS559729 2001 - 0.357821
mdoH LBF_5053 Membrane glycosyltransferasep74 CDS69381 2043 + 0.380323
mltA LBF_0285 Membrane-bound lytic murein transglycosylase A precursorchromosome I CDS295024 1155 + 0.41645
mraW LBF_1709 S-adenosylmethionine-dependentmethyltransferasechromosome I CDS1845898 945 - 0.416931
mraY LBF_1706 Phospho-N-acetylmuramoyl-pentapeptide-transferasechromosome I CDS1842908 1113 - 0.393531
mrcA LBF_0612 Membrane carboxypeptidase/penicillin-binding proteinchromosome I CDS647334 2583 + 0.415021
mreC LBF_2964 Cell shape-determining proteinchromosome I CDS3191231 1197 + 0.43609
murA LBF_0925 UDP-N-acetylglucosamine 1- carboxyvinyltransferasechromosome I CDS996709 1305 - 0.495785
murB LBF_3253 UDP-N-acetylmuramate dehydrogenasechromosome I CDS3488645 1083 - 0.378578
murC-1 LBF_1703 UDP-N-acetylmuramate--L-alanine ligasechromosome I CDS1839255 1410 - 0.38156
murC-2 LBF_0489 UDP-N-acetylmuramate--L-alanine ligasechromosome I CDS512640 1395 + 0.400717
murD LBF_1153 UDP-N-acetylmuramoylalanine--D-glutamate ligasechromosome I CDS1252648 1392 - 0.395115
murE LBF_1707 UDP-N-acetylmuramoylalanyl-D-glutamate--2,6- diaminopimelate ligasechromosome I CDS1844031 1527 - 0.382449
murF LBF_1700 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D- alanine ligasechromosome I CDS1836221 1380 + 0.358696
murG LBF_1704 Undecaprenyldiphospho-muramoylpentapeptide beta- N-acetylglucosaminyltransferasechromosome I CDS1840678 1086 - 0.378453
murI LBF_0880 Glutamate racemasechromosome I CDS949585 813 + 0.353014
neuB-1 LBF_0845 N-acetyl neuraminic (sialic) acid synthetasechromosome I CDS902068 993 - 0.393756
neuB-3 LBF_1974 N-acetylneuraminic acid (sialic acid) synthetasechromosome I CDS2114506 1047 - 0.39064
nlpD LBF_1376 Metalloendopeptidasechromosome I CDS1499126 1125 - 0.4
pBP3 LBF_0250 Penicillin-binding protein 3chromosome I CDS253599 1812 - 0.390177
ponA LBF_0816 Penicillin binding protein 1chromosome I CDS867325 2484 + 0.399356
prc LBF_1436 Periplasmic proteasechromosome I CDS1557090 1491 - 0.338699
prc LBF_4255 Periplasmic proteasechromosome II CDS260515 1713 + 0.36836
prc-1 LBF_0456 Periplasmic proteasechromosome I CDS474694 1845 - 0.382114
prc-2 LBF_1264 C-terminal processing periplasmic-protease-3chromosome I CDS1379255 1371 + 0.378556
rmlA LBF_1987 Glucose-1-phosphate thymidylyltransferasechromosome I CDS2126664 885 - 0.38983
rmlB LBF_1986 dTDP-glucose 4,6-dehydratasechromosome I CDS2125641 1023 - 0.355816
tolC LBF_0556 TolC Outer membrane proteinchromosome I CDS582119 1419 - 0.365751
tonB LBF_2916 TonB proteinchromosome I CDS3141119 654 + 0.389908
ugd LBF_0904 UDP-glucose 6-dehydrogenasechromosome I CDS975289 1305 + 0.412261
wecE LBF_0039 Pyridoxal-phosphate-dependent aminotransferasechromosome I CDS41430 1194 - 0.40871
wecE-1 LBF_1983 Pyridoxal-phosphate-dependent aminotransferasechromosome I CDS2122462 1161 - 0.341085