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2024-05-10 18:46:05

Gene list

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COG category: Cell motility
Organism: Leptospira biflexa serovar Patoc strain Patoc 1 (Paris), Patoc 1 (Paris)

Number of genes found: 143

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Leptospira biflexa serovar Patoc strain Patoc 1 (Paris), Patoc 1 (Paris)
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
NA LEPBI_I2230 Putative plasmid maintenance system killer proteinchromosome I CDS2312122 282 + 0.329787
NA LEPBI_I0116 Putative methyl-accepting chemotaxis protein; putative membrane proteinchromosome I CDS119511 1566 + 0.379949
NA LEPBI_I1866 ABC-type transport system, ATP-binding protein; putative resistance to organic solvantchromosome I CDS1956772 789 + 0.437262
NA LEPBI_I0940 Putative tetraacyldisaccharide 4'-kinase (Lipid A 4'-kinase)chromosome I CDS972158 1125 + 0.352
NA LEPBI_I0136 Putative MotB proteinchromosome I CDS135002 729 + 0.371742
NA LEPBI_I2393 Putative chemotaxis protein CheW-like proteinchromosome I CDS2466140 504 - 0.375
NA LEPBI_I1401 Protein-export membrane protein SecDchromosome I CDS1459692 1935 + 0.407752
NA LEPBI_I0909 Putative periplasmic component of the Tol biopolymer transport systemchromosome I CDS932428 7935 + 0.32489
NA LEPBI_I0593 Hypothetical protein; putative membrane proteinchromosome I CDS593799 1812 - 0.36479
NA LEPBI_I0201 Conserved hypothetical protein; putative signal peptidechromosome I CDS194674 1497 - 0.434202
NA LEPBI_I3244 Putative chemotaxis sensory transducerchromosome I CDS3360363 1458 - 0.349794
NA LEPBI_I0109 Putative methyl-accepting chemotaxis protein; putative membrane proteinchromosome I CDS110888 1563 + 0.34357
NA LEPBI_I0090 Putative oxidasechromosome I CDS89804 1569 + 0.434672
NA LEPBI_I0690 Putative DNA processing chain A DprA, SMF familychromosome I CDS697908 927 + 0.413161
NA LEPBI_I2922 Conserved hypothetical proteinchromosome I CDS3019878 516 + 0.377907
NA LEPBI_I2626 Putative methyl-accepting chemotaxis protein (MCP); putative membrane proteinchromosome I CDS2719237 1581 + 0.377609
NA LEPBI_I2058 Putative outer membrane efflux protein; putative signal peptidechromosome I CDS2146748 1542 + 0.427367
NA LEPBI_I1681 Putative pilisubunits; putative signal peptidechromosome I CDS1752311 672 + 0.370536
NA LEPBI_II0160 Hypothetical proteinchromosome II CDS156854 1230 + 0.374797
NA LEPBI_I0484 Putative methyl-accepting chemotaxis protein; putative membrane proteinchromosome I CDS478194 1776 + 0.338401
NA LEPBI_II0084 Putative MotA/TolQ/ExbB proton channel proteinchromosome II CDS81200 747 - 0.416332
NA LEPBI_I3278 Putative chemotaxis protein CheCchromosome I CDS3389767 603 + 0.320066
NA LEPBI_II0187 Putative methyl-accepting chemotaxis protein tlpA, putative transmembrane proteinchromosome II CDS186516 2541 - 0.414404
NA LEPBI_I1083 Putative methyl-accepting chemotaxis protein (MCP); putative signal peptidechromosome I CDS1130476 1905 - 0.372703
NA LEPBI_II0194 Putative methyl-accepting chemotaxis protein; putative signal peptidechromosome II CDS194420 2088 + 0.395115
NA LEPBI_I1488 Putative methyl-accepting chemotaxis protein; putative signal peptidechromosome I CDS1549030 2106 + 0.377493
NA LEPBI_I1075 Putative methyl-accepting chemotaxis protein (MCP); putative membrane proteinchromosome I CDS1118639 1782 + 0.360269
NA LEPBI_I1604 Conserved hypothetical protein; putative membrane proteinchromosome I CDS1679691 525 - 0.373333
NA LEPBI_I0575 Putative outer membrane proteinchromosome I CDS576549 1419 - 0.365751
NA LEPBI_I3390 Putative ABC-type transport sytem, outer membrane proteinchromosome I CDS3513723 1428 + 0.366246
NA LEPBI_I0717 Putative hemolysin-related membrane protein with CBS regulatory domainchromosome I CDS732192 1371 + 0.407732
NA LEPBI_I0463 Putative methyl-accepting chemotaxis protein; putative signal peptidechromosome I CDS457793 2049 + 0.352855
NA LEPBI_II0193 Putative methyl-accepting chemotaxis protein; putative signal peptidechromosome II CDS192348 2061 + 0.378942
NA LEPBI_I2078 Putative peptidase, family S26; putative signal peptidechromosome I CDS2172457 531 + 0.419962
NA LEPBI_I2551 Putative flagellar biogenesis protein FliOchromosome I CDS2640574 852 - 0.414319
NA LEPBI_I1258 Putative methyl-accepting chemotaxis protein; putative membrane proteinchromosome I CDS1302543 1608 + 0.38806
NA LEPBI_I2854 Hypothetical protein; putative signal peptidechromosome I CDS2943820 1974 + 0.3308
NA LEPBI_I2436 Putative methyl-accepting chemotaxis protein McpBchromosome I CDS2508541 2073 - 0.385432
NA LEPBI_I2244 Putative death-on-curing protein DOCchromosome I CDS2320752 399 + 0.328321
NA LEPBI_I3234 Putative lipid A biosynthesis lauroyl acyltransferase; putative membrane proteinchromosome I CDS3347303 909 - 0.376238
NA LEPBI_I1509 Putative methyl-accepting chemotaxis protein; putative membrane proteinchromosome I CDS1572608 1803 + 0.395452
NA LEPBI_I2256 Putative plasmid maintenance system antidote-like proteinchromosome I CDS2329457 306 + 0.323529
NA LEPBI_I2287 Putative methyl-accepting chemotaxis protein (MCP); putative membrane proteinchromosome I CDS2352728 1542 - 0.394942
NA LEPBI_I1834 Putative outer membrane proteinchromosome I CDS1922797 1065 + 0.380282
NA LEPBI_I1610 Flagellar motor switch protein FliMchromosome I CDS1684640 1026 + 0.453216
NA LEPBI_I3414 Putative oxidoreductase, GMC familychromosome I CDS3533892 1608 - 0.429104
NA LEPBI_I3030 Conserved hypothetical proteinchromosome I CDS3142807 1356 - 0.365044
NA LEPBI_I0482 Putative chemotaxis protein CheWchromosome I CDS476657 477 + 0.42348
NA LEPBI_I2077 Putative methyl-accepting chemotaxis protein (MCP); putative membrane proteinchromosome I CDS2169954 2511 + 0.372362
NA LEPBI_I2274 Hypothetical proteinchromosome I CDS2342066 1125 + 0.363556
NA LEPBI_I1232 Putative methyl-accepting chemotaxis protein; putative membrane protein; putative signal peptidechromosome I CDS1282807 1554 - 0.350708
NA LEPBI_II0265 Hypothetical methyl-accepting chemotaxis protein; putative membrane proteinchromosome II CDS257201 1578 - 0.347275
NA LEPBI_I0102 Putative oxidoreductasechromosome I CDS102794 1542 + 0.381971
NA LEPBI_I1838 Putative petidase S49, protease IV familychromosome I CDS1928834 1635 + 0.394495
NA LEPBI_I3099 Putative efflux system outer membrane protein CzcCchromosome I CDS3211859 1332 + 0.331081
NA LEPBI_II0153 Putative biopolymer transport protein ExbD/TolR; putative signal peptidechromosome II CDS150911 396 - 0.315657
NA LEPBI_I0422 Putative methyl-accepting chemotaxis protein (MCP); putative membrane proteinchromosome I CDS415046 1527 + 0.352325
NA LEPBI_I1314 Putative cation efflux system protein CzcCchromosome I CDS1370375 1326 + 0.373303
NA LEPBI_II0154 Putative transport protein, MotA/TolQ/ExbB proton channel family; putative membrane proteinchromosome II CDS151303 465 - 0.376344
NA LEPBI_I0757 ABC-type transport system, ATP-binding proteinchromosome I CDS775011 768 + 0.404948
NA LEPBI_I2231 Putative lambda repressor-like DNA-binding proteinchromosome I CDS2312417 342 + 0.280702
cheA1 LEPBI_I0920 Chemotaxis protein histidine kinase CheAchromosome I CDS951215 1932 - 0.377329
cheA3 LEPBI_I2392 chemotaxis protein CheAchromosome I CDS2462891 3231 - 0.389044
cheA4 LEPBI_I1583 Chemotaxis protein CheAchromosome I CDS1657911 2196 - 0.375228
cheB1 LEPBI_I0919 Chemotaxis response regulator CheBchromosome I CDS950175 1044 - 0.401341
cheB3 LEPBI_I2391 Chemotaxis response regulator protein-glutamate methylesterasechromosome I CDS2461827 1068 - 0.42603
cheB4 LEPBI_I1579 Protein-glutamate methylesterase CheBchromosome I CDS1653147 1053 - 0.425451
cheD LEPBI_II0074 Chemotaxis protein CheDchromosome II CDS72225 504 - 0.394841
cheD4 LEPBI_I1580 Chemotaxis protein cheDchromosome I CDS1654203 489 - 0.361963
cheR LEPBI_I1764 Chemotaxis protein methyltransferasechromosome I CDS1842045 933 - 0.382637
cheW1 LEPBI_I0921 Signal transducer CheW proteinchromosome I CDS953150 504 - 0.382937
cheW4 LEPBI_I1581 Chemotaxis protein CheWchromosome I CDS1654692 477 - 0.371069
cheX LEPBI_I2661 Chemotaxis proteinchromosome I CDS2757846 465 + 0.430108
choB LEPBI_I0286 Cholesterol oxidasechromosome I CDS279645 1749 + 0.404231
clpP1 LEPBI_I1706 ATP-dependent Clp protease proteolytic subunit (ATP-dependent Clp protease proteolytic subunit)chromosome I CDS1779414 609 + 0.408867
clpP2 LEPBI_I0969 ATP-dependent Clp protease proteolytic subunit (Endopeptidase Clp)chromosome I CDS1005282 603 + 0.441128
exbB1 LEPBI_I0149 Biopolymer transport ExbB protein; putative membrane proteinchromosome I CDS143725 840 - 0.429762
exbB2 LEPBI_I3019 Biopolymer transport ExbB protein; putative membrane proteinchromosome I CDS3131727 615 + 0.36748
exbB3 LEPBI_I1631 Biopolymer transport ExbB protein; putative membrane proteinchromosome I CDS1705438 615 + 0.447154
exbD1 LEPBI_I0148 Biopolymer transport ExbD proteinchromosome I CDS143283 420 - 0.364286
exbD2 LEPBI_I0147 Biopolymer transport ExbD proteinchromosome I CDS142859 423 - 0.41844
exbD3 LEPBI_I3020 Biopolymer transport ExbD proteinchromosome I CDS3132344 402 + 0.375622
exbD4 LEPBI_I1632 Biopolymer transport ExbD proteinchromosome I CDS1706063 432 + 0.365741
flaB LEPBI_I1589 Flagellar filament core protein FlaBchromosome I CDS1664994 849 + 0.444052
flaB2 LEPBI_I2133 Flagellar filament 35 kDa core protein (Flagellin class B; 35kDa antigen)chromosome I CDS2225096 846 - 0.43026
flaB3 LEPBI_I2132 Flagellar filament 35 kDa core protein (Flagellin class B; 35 kDa antigen)chromosome I CDS2224073 849 - 0.464075
flaB4 LEPBI_I1872 Flagellar filament 35 kDa core protein (Flagellin class B; 35 kDa antigen)chromosome I CDS1963407 855 + 0.422222
flbD LEPBI_I0195 Flagellar protein FlbDchromosome I CDS189476 216 + 0.416667
flgA LEPBI_I1533 Flagellar protein FlgA; putative signal peptidechromosome I CDS1598987 942 + 0.394904
flgB LEPBI_I0752 Flagellar basal-body rod protein FlgBchromosome I CDS767984 432 - 0.391204
flgC LEPBI_I0751 Flagellar basal-body rod protein FlgCchromosome I CDS767512 462 - 0.474026
flgD LEPBI_I1190 Basal-body rod modification protein FlgDchromosome I CDS1238866 585 + 0.355556
flgE LEPBI_I1191 Flagellar hook protein FlgEchromosome I CDS1239489 1395 + 0.431541
flgG1 LEPBI_I1532 Flagellar basal-body rod protein FlgG (Distal rod protein)chromosome I CDS1598190 798 + 0.4599
flgG2 LEPBI_I1542 Flagellar basal-body rod protein FlgG (Distal rod protein)chromosome I CDS1607974 861 + 0.432056
flgH LEPBI_I1534 Flagellar L-ring protein (Basal body L-ring protein)chromosome I CDS1599929 792 + 0.378788
flgI LEPBI_I1535 Flagellar P-ring protein (Basal body P-ring protein)chromosome I CDS1600713 1179 + 0.446141
flgJ LEPBI_I1536 Peptidoglycan hydrolase FlgJ (Muramidase FlgJ)chromosome I CDS1601927 486 + 0.382716
flgK LEPBI_I3213 Flagellar hook-associated protein 1 (HAP1)chromosome I CDS3328840 1914 - 0.424242
flgL LEPBI_I3212 Flagellar hook-associated protein 3 (HAP3)chromosome I CDS3327569 1269 - 0.42238
flhA LEPBI_I2546 Flagellar biosynthesis protein FlhA; putative membrane proteinchromosome I CDS2635274 2115 - 0.434515
flhB LEPBI_I2547 Flagellar biosynthetic protein FlhB; putative membrane proteinchromosome I CDS2637393 1212 - 0.429868
flhF LEPBI_I0943 Flagellar biosynthesis protein FlhF (Flagella associated GTP-binding protein)chromosome I CDS975355 1356 + 0.422566
fliD LEPBI_I0580 Flagellar hook-associated protein 2chromosome I CDS582760 1923 + 0.405616
fliE LEPBI_I0750 Flagellar hook-basal body complex protein FliEchromosome I CDS767030 366 - 0.412568
fliF LEPBI_I0739 Flagellar M-ring FliF proteinchromosome I CDS755184 1701 - 0.425044
fliG1 LEPBI_I2946 Flagellar motor switch protein FliGchromosome I CDS3048324 1068 + 0.449438
fliG2 LEPBI_I3423 Flagellar motor switch protein FliGchromosome I CDS3542534 1014 - 0.463511
fliG3 LEPBI_I1555 Flagellar motor switch proteinchromosome I CDS1622774 1020 - 0.431373
fliH LEPBI_I2947 Flagellar assembly protein FliHchromosome I CDS3049396 924 + 0.405844
fliI LEPBI_I0955 Flagellum-specific ATP synthasechromosome I CDS987771 1365 - 0.41978
fliL LEPBI_I0198 Flagellar FliL proteinchromosome I CDS191322 528 + 0.405303
fliN LEPBI_I1599 Flagellar motor switch proteinchromosome I CDS1676067 519 + 0.489403
fliP LEPBI_I2550 Flagellar biosynthetic protein FliP; putative membrane protein; putative signal peptidechromosome I CDS2639768 810 - 0.38642
fliQ LEPBI_I2549 Flagellar biosynthetic protein FliQchromosome I CDS2639508 264 - 0.393939
fliR LEPBI_I2548 Flagellar biosynthetic protein FliRchromosome I CDS2638724 783 - 0.41507
fliS LEPBI_I1471 Flagellar protein FliS (modular protein)chromosome I CDS1532099 447 + 0.400447
fliY LEPBI_I2552 Flagellar motor switch protein FliYchromosome I CDS2641422 1071 - 0.464986
gspD LEPBI_I1675 General secretory pathway protein Dchromosome I CDS1746065 1764 + 0.423469
gspE LEPBI_I1676 General secretion pathway protein E (Type II traffic warden ATPase)chromosome I CDS1747825 1677 + 0.410256
gspF LEPBI_I1677 General secretion pathway protein Fchromosome I CDS1749506 1227 + 0.384678
gspG LEPBI_I1678 General secretory pathway protein Gchromosome I CDS1750738 462 + 0.367965
lepA LEPBI_I1703 GTP-binding protein LepAchromosome I CDS1775717 1806 - 0.445736
lepB1 LEPBI_I0258 Signal peptidase Ichromosome I CDS251371 600 - 0.398333
lepB2 LEPBI_I0790 Signal peptidase I (Leader peptidase I)chromosome I CDS809558 1038 + 0.405588
lspA LEPBI_I1750 Lipoprotein signal peptidasechromosome I CDS1827523 561 - 0.356506
mcp LEPBI_I0922 Methyl-accepting chemotaxis protein (MCP); putative signal peptidechromosome I CDS953663 1749 - 0.396226
motA LEPBI_I0196 Chemotaxis MotA protein; putative membrane proteinchromosome I CDS189695 783 + 0.478927
motA1 LEPBI_I2845 Chemotaxis MotA protein; putative membrane protein; putative signal peptidechromosome I CDS2936542 738 + 0.369919
motB LEPBI_I0197 Chemotaxis MotB proteinchromosome I CDS190487 834 + 0.425659
oxaA LEPBI_I0292 Inner membrane protein OxaA; putative membrane proteinchromosome I CDS286537 1950 - 0.391282
pfaP LEPBI_I0456 Peptidase PfaP (Periplasmic flagella-associated protein; PF-associated peptidase)chromosome I CDS451926 966 + 0.430642
pilD LEPBI_I1408 Type 4 prepilin-like proteins leader peptide processing enzyme [Includes: Leader peptidase (Prepilin peptidase); N-methyltransferase] ; putative membrchromosome I CDS1466879 858 - 0.36014
secA LEPBI_I2859 Preprotein translocase SecA subunitchromosome I CDS2949090 2757 - 0.371781
secE LEPBI_I1978 Preprotein translocase SecE subunitchromosome I CDS2057140 189 - 0.380952
secF LEPBI_I1402 Protein-export membrane protein SecF; putative signal peptidechromosome I CDS1461619 939 + 0.389776
secG LEPBI_I2083 Protein-export membrane protein SecG (Preprotein translocase band 1 subunit; P12); putative signal peptidechromosome I CDS2177812 333 + 0.441441
secY LEPBI_I1945 Preprotein translocase SecY subunit; putative membrane proteinchromosome I CDS2031485 1380 - 0.40942
sppA LEPBI_I1014 Signal peptide peptidase SppA, S49 familychromosome I CDS1060737 999 - 0.418418
tatA LEPBI_I0974 Sec-independent protein secretion pathway component TatA/Echromosome I CDS1009885 270 - 0.411111
tatC LEPBI_I0973 Sec-independent protein translocase protein TatC; putative membrane proteinchromosome I CDS1009096 780 - 0.412821
typA LEPBI_I1772 GTP-binding elongation factor family protein, TypA subfamilychromosome I CDS1850967 1809 - 0.449972
yajC LEPBI_I1399 Preprotein translocase, YajC subunitchromosome I CDS1458716 324 + 0.373457