SGB - The Spirochetes Genome Browser - Gene list

Title

+ Borrelia afzelii, PKo

+ Borrelia burgdorferi ZS7, ZS7

+ Borrelia burgdorferi, B31

+ Borrelia duttonii Ly, Ly

+ Borrelia garinii High passage (300), PBi

+ Borrelia garinii, PBi

+ Borrelia hermsii DAH, DAH

+ Borrelia recurrentis A1, A1

+ Borrelia turicatae 91E135, 91E135

+ Leptospira biflexa serovar Patoc strain Patoc 1 (Ames), Patoc 1 (Ames)

+ Leptospira biflexa serovar Patoc strain Patoc 1 (Paris), Patoc 1 (Paris)

+ Leptospira borgpetersenii serovar Hardjo-bovis JB197, JB197

+ Leptospira borgpetersenii serovar Hardjo-bovis L550, L550

+ Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130

+ Leptospira interrogans serovar lai str. 56601

+ Treponema denticola ATCC 35405

+ Treponema pallidum

+ Treponema pallidum subsp. pallidum SS14, SS14

+ COG functional categories

+ (Clickable) linear whole genome views

+ Horizontal gene transfer (predicted by SIGI-HMM)

+ Sequence retrieval

+ Advanced search

+ Sequence similarity search

+ Best bidirectional hits (protein-based analysis)

+ Gene core sets (protein-based analysis)

+ Gene partnerships (DNA-based analysis)

+ Protein variations (protein-based analysis)

+ Synteny analysis (protein-based analysis)

+ Gene conservation (protein-based analysis)

+ Codon and amino acid usages (DNA- and protein-based analysis)

+ Alignments of whole reference and target genomic elements (DNA-based analysis)

Gene list

Applied filters:

COG category: NOT ANALYZED
Genomic element: pl70

Number of genes found: 16

Free access


Show UniProt / TrEMBL protein name		View in Fasta format (DNA)		View in Fasta format (Protein)

Borrelia duttonii Ly, Ly

Name	Locus tag	Product / Description	Genomic element	Type	Begin	Length	Strand	GC-content
NA	BDU_2052		pl70	pseudo	51214	893	+	0.382979
NA	BDU_2053		pl70	pseudo	53330	559	+	0.352415
NA	BDU_2032		pl70	pseudo	31744	525	+	0.249524
NA	BDU_2035		pl70	pseudo	34189	308	-	0.24026
NA	BDU_2030		pl70	pseudo	30111	706	-	0.286119
NA	BDU_2059		pl70	pseudo	61114	699	+	0.370529
NA	BDU_2050		pl70	pseudo	48519	742	+	0.359838
NA	BDU_2008		pl70	pseudo	9634	695	-	0.338129
NA	BDU_2034		pl70	pseudo	33299	665	-	0.26015
NA	BDU_2027		pl70	pseudo	26451	1031	+	0.379243
NA	BDU_2042		pl70	pseudo	39963	517	+	0.274662
NA	BDU_2043		pl70	pseudo	40522	435	-	0.252874
NA	BDU_2051		pl70	pseudo	49822	1056	+	0.390152
NA	BDU_2031		pl70	pseudo	30830	513	-	0.290448
NA	BDU_2047		pl70	pseudo	44629	674	+	0.381306
NA	BDU_2036		pl70	pseudo	34523	245	-	0.302041