SGB - The Spirochetes Genome Browser - Gene list

Title

+ Borrelia afzelii, PKo

+ Borrelia burgdorferi ZS7, ZS7

+ Borrelia burgdorferi, B31

+ Borrelia duttonii Ly, Ly

+ Borrelia garinii High passage (300), PBi

+ Borrelia garinii, PBi

+ Borrelia hermsii DAH, DAH

+ Borrelia recurrentis A1, A1

+ Borrelia turicatae 91E135, 91E135

+ Leptospira biflexa serovar Patoc strain Patoc 1 (Ames), Patoc 1 (Ames)

+ Leptospira biflexa serovar Patoc strain Patoc 1 (Paris), Patoc 1 (Paris)

+ Leptospira borgpetersenii serovar Hardjo-bovis JB197, JB197

+ Leptospira borgpetersenii serovar Hardjo-bovis L550, L550

+ Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130

+ Leptospira interrogans serovar lai str. 56601

+ Treponema denticola ATCC 35405

+ Treponema pallidum

+ Treponema pallidum subsp. pallidum SS14, SS14

+ COG functional categories

+ (Clickable) linear whole genome views

+ Horizontal gene transfer (predicted by SIGI-HMM)

+ Sequence retrieval

+ Advanced search

+ Sequence similarity search

+ Best bidirectional hits (protein-based analysis)

+ Gene core sets (protein-based analysis)

+ Gene partnerships (DNA-based analysis)

+ Protein variations (protein-based analysis)

+ Synteny analysis (protein-based analysis)

+ Gene conservation (protein-based analysis)

+ Codon and amino acid usages (DNA- and protein-based analysis)

+ Alignments of whole reference and target genomic elements (DNA-based analysis)

Gene list

Applied filters:

COG category: NOT ANALYZED
Genomic element: pl31

Number of genes found: 13

Free access


Show UniProt / TrEMBL protein name		View in Fasta format (DNA)		View in Fasta format (Protein)

Borrelia duttonii Ly, Ly

Name	Locus tag	Product / Description	Genomic element	Type	Begin	Length	Strand	GC-content
NA	BDU_9028		pl31	pseudo	24386	653	+	0.390505
NA	BDU_9004		pl31	pseudo	3471	498	-	0.281125
NA	BDU_9020		pl31	pseudo	16051	261	+	0.252874
NA	BDU_9002		pl31	pseudo	1461	1122	-	0.384135
NA	BDU_9024		pl31	pseudo	19365	1351	+	0.26943
NA	BDU_9023		pl31	pseudo	18834	288	+	0.315972
NA	BDU_9031		pl31	pseudo	26820	1158	+	0.274611
NA	BDU_9011		pl31	pseudo	8874	1084	-	0.259225
NA	BDU_9017		pl31	pseudo	14500	219	+	0.251142
NA	BDU_9007		pl31	pseudo	5763	760	+	0.246053
NA	BDU_9019		pl31	pseudo	15696	357	+	0.268908
NA	BDU_9003		pl31	pseudo	2925	394	-	0.28934
NA	BDU_9021		pl31	pseudo	16466	448	-	0.258929