SGB - The Spirochetes Genome Browser - Gene list

Title

+ Borrelia afzelii, PKo

+ Borrelia burgdorferi ZS7, ZS7

+ Borrelia burgdorferi, B31

+ Borrelia duttonii Ly, Ly

+ Borrelia garinii High passage (300), PBi

+ Borrelia garinii, PBi

+ Borrelia hermsii DAH, DAH

+ Borrelia recurrentis A1, A1

+ Borrelia turicatae 91E135, 91E135

+ Leptospira biflexa serovar Patoc strain Patoc 1 (Ames), Patoc 1 (Ames)

+ Leptospira biflexa serovar Patoc strain Patoc 1 (Paris), Patoc 1 (Paris)

+ Leptospira borgpetersenii serovar Hardjo-bovis JB197, JB197

+ Leptospira borgpetersenii serovar Hardjo-bovis L550, L550

+ Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130

+ Leptospira interrogans serovar lai str. 56601

+ Treponema denticola ATCC 35405

+ Treponema pallidum

+ Treponema pallidum subsp. pallidum SS14, SS14

+ COG functional categories

+ (Clickable) linear whole genome views

+ Horizontal gene transfer (predicted by SIGI-HMM)

+ Sequence retrieval

+ Advanced search

+ Sequence similarity search

+ Best bidirectional hits (protein-based analysis)

+ Gene core sets (protein-based analysis)

+ Gene partnerships (DNA-based analysis)

+ Protein variations (protein-based analysis)

+ Synteny analysis (protein-based analysis)

+ Gene conservation (protein-based analysis)

+ Codon and amino acid usages (DNA- and protein-based analysis)

+ Alignments of whole reference and target genomic elements (DNA-based analysis)

Gene list

Applied filters:

COG category: NOT ANALYZED
Genomic element: pl124

Number of genes found: 19

Free access


Show UniProt / TrEMBL protein name		View in Fasta format (DNA)		View in Fasta format (Protein)

Borrelia recurrentis A1, A1

Name	Locus tag	Product / Description	Genomic element	Type	Begin	Length	Strand	GC-content
NA	BRE_1099		pl124	pseudo	106222	1931	+	0.276023
NA	BRE_1020		pl124	pseudo	21765	870	+	0.294253
NA	BRE_1016		pl124	pseudo	16737	944	-	0.286017
NA	BRE_1013		pl124	pseudo	12841	1134	+	0.268078
NA	BRE_1053		pl124	pseudo	55387	944	-	0.284958
NA	BRE_1071		pl124	pseudo	71076	1020	+	0.259804
NA	BRE_1066		pl124	pseudo	64772	539	-	0.270872
NA	BRE_1033		pl124	pseudo	35852	919	-	0.279652
NA	BRE_1098		pl124	pseudo	104316	1255	+	0.276494
NA	BRE_1101		pl124	pseudo	109246	1756	+	0.26082
NA	BRE_1010		pl124	pseudo	10199	906	-	0.273731
NA	BRE_1022		pl124	pseudo	23953	894	-	0.256152
NA	BRE_1104		pl124	pseudo	114034	1253	+	0.301676
NA	BRE_1067		pl124	pseudo	65309	1209	-	0.269644
NA	BRE_1028		pl124	pseudo	30217	1096	-	0.285584
NA	BRE_1091		pl124	pseudo	96165	581	-	0.2358
NA	BRE_1096		pl124	pseudo	101859	1132	+	0.267668
NA	BRE_1065		pl124	pseudo	64123	592	-	0.363176
NA	BRE_1012		pl124	pseudo	12375	276	-	0.25