SGB - The Spirochetes Genome Browser - Gene list

Title

+ Borrelia afzelii, PKo

+ Borrelia burgdorferi ZS7, ZS7

+ Borrelia burgdorferi, B31

+ Borrelia duttonii Ly, Ly

+ Borrelia garinii High passage (300), PBi

+ Borrelia garinii, PBi

+ Borrelia hermsii DAH, DAH

+ Borrelia recurrentis A1, A1

+ Borrelia turicatae 91E135, 91E135

+ Leptospira biflexa serovar Patoc strain Patoc 1 (Ames), Patoc 1 (Ames)

+ Leptospira biflexa serovar Patoc strain Patoc 1 (Paris), Patoc 1 (Paris)

+ Leptospira borgpetersenii serovar Hardjo-bovis JB197, JB197

+ Leptospira borgpetersenii serovar Hardjo-bovis L550, L550

+ Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130

+ Leptospira interrogans serovar lai str. 56601

+ Treponema denticola ATCC 35405

+ Treponema pallidum

+ Treponema pallidum subsp. pallidum SS14, SS14

+ COG functional categories

+ (Clickable) linear whole genome views

+ Horizontal gene transfer (predicted by SIGI-HMM)

+ Sequence retrieval

+ Advanced search

+ Sequence similarity search

+ Best bidirectional hits (protein-based analysis)

+ Gene core sets (protein-based analysis)

+ Gene partnerships (DNA-based analysis)

+ Protein variations (protein-based analysis)

+ Synteny analysis (protein-based analysis)

+ Gene conservation (protein-based analysis)

+ Codon and amino acid usages (DNA- and protein-based analysis)

+ Alignments of whole reference and target genomic elements (DNA-based analysis)

Gene list

Applied filters:

COG category: NOT ANALYZED
Genomic element: pl33

Number of genes found: 13

Free access


Show UniProt / TrEMBL protein name		View in Fasta format (DNA)		View in Fasta format (Protein)

Borrelia recurrentis A1, A1

Name	Locus tag	Product / Description	Genomic element	Type	Begin	Length	Strand	GC-content
NA	BRE_5017		pl33	pseudo	16684	323	+	0.337461
NA	BRE_5004		pl33	pseudo	2337	886	-	0.266366
NA	BRE_5024		pl33	pseudo	23911	1063	+	0.37159
NA	BRE_5006		pl33	pseudo	4965	926	-	0.361771
NA	BRE_5028		pl33	pseudo	28882	931	+	0.392052
NA	BRE_5019		pl33	pseudo	18558	1026	+	0.401559
NA	BRE_5026		pl33	pseudo	26611	919	+	0.367791
NA	BRE_5007		pl33	pseudo	6274	1252	-	0.345048
NA	BRE_5013		pl33	pseudo	11415	931	+	0.344791
NA	BRE_5022		pl33	pseudo	21443	1041	+	0.269933
NA	BRE_5005		pl33	pseudo	3785	306	-	0.352941
NA	BRE_5008		pl33	pseudo	7724	577	-	0.259965
NA	BRE_5021		pl33	pseudo	21052	216	+	0.25463