SGB - The Spirochetes Genome Browser - Gene list

Title

+ Borrelia afzelii, PKo

+ Borrelia burgdorferi ZS7, ZS7

+ Borrelia burgdorferi, B31

+ Borrelia duttonii Ly, Ly

+ Borrelia garinii High passage (300), PBi

+ Borrelia garinii, PBi

+ Borrelia hermsii DAH, DAH

+ Borrelia recurrentis A1, A1

+ Borrelia turicatae 91E135, 91E135

+ Leptospira biflexa serovar Patoc strain Patoc 1 (Ames), Patoc 1 (Ames)

+ Leptospira biflexa serovar Patoc strain Patoc 1 (Paris), Patoc 1 (Paris)

+ Leptospira borgpetersenii serovar Hardjo-bovis JB197, JB197

+ Leptospira borgpetersenii serovar Hardjo-bovis L550, L550

+ Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130

+ Leptospira interrogans serovar lai str. 56601

+ Treponema denticola ATCC 35405

+ Treponema pallidum

+ Treponema pallidum subsp. pallidum SS14, SS14

+ COG functional categories

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+ Horizontal gene transfer (predicted by SIGI-HMM)

+ Sequence retrieval

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+ Sequence similarity search

+ Best bidirectional hits (protein-based analysis)

+ Gene core sets (protein-based analysis)

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+ Synteny analysis (protein-based analysis)

+ Gene conservation (protein-based analysis)

+ Codon and amino acid usages (DNA- and protein-based analysis)

+ Alignments of whole reference and target genomic elements (DNA-based analysis)

Gene list

Applied filters:

COG category: Secondary metabolites biosynthesis, transport and catabolism
Organism: Borrelia burgdorferi, B31

Number of genes found: 9

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Hide UniProt / TrEMBL protein name		View in Fasta format (DNA)		View in Fasta format (Protein)

Borrelia burgdorferi, B31

Name	Locus tag	Product / Description	UniProt / TrEMBL protein name	Genomic element	Type	Begin	Length	Strand	GC-content
NA	BB_0740	conserved hypothetical protein	SubName: Full=Uncharacterized protein;	chromosome	CDS	782152	678	-	0.240413
NA	BB_0816	predicted coding region BB0816		chromosome	CDS	862696	951	+	0.284963
NA	BB_0140	acriflavine resistance protein (acrB)		chromosome	CDS	138850	3111	-	0.309547
NA	BB_E22	pyrazinamidase/nicotinamidase (pncA)		lp25	CDS	15042	537	-	0.303538
NA	BB_0583	conserved hypothetical integral membrane protein	SubName: Full=Conserved hypothetical integral membrane protein;	chromosome	CDS	599495	1350	+	0.288889
NA	BB_0473	conserved hypothetical integral membrane protein	SubName: Full=Conserved hypothetical integral membrane protein;	chromosome	CDS	492588	1365	+	0.282051
NA	BB_0584	conserved hypothetical integral membrane protein		chromosome	CDS	600998	1347	+	0.276912
NA	BB_0141	membrane fusion protein (mtrC)		chromosome	CDS	141979	957	-	0.3093
NA	BB_0754	ABC transporter, ATP-binding protein	SubName: Full=ABC transporter, ATP-binding protein;	chromosome	CDS	797119	930	-	0.27957