SGB - The Spirochetes Genome Browser - Gene list

Title

+ Borrelia afzelii, PKo

+ Borrelia burgdorferi ZS7, ZS7

+ Borrelia burgdorferi, B31

+ Borrelia duttonii Ly, Ly

+ Borrelia garinii High passage (300), PBi

+ Borrelia garinii, PBi

+ Borrelia hermsii DAH, DAH

+ Borrelia recurrentis A1, A1

+ Borrelia turicatae 91E135, 91E135

+ Leptospira biflexa serovar Patoc strain Patoc 1 (Ames), Patoc 1 (Ames)

+ Leptospira biflexa serovar Patoc strain Patoc 1 (Paris), Patoc 1 (Paris)

+ Leptospira borgpetersenii serovar Hardjo-bovis JB197, JB197

+ Leptospira borgpetersenii serovar Hardjo-bovis L550, L550

+ Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130

+ Leptospira interrogans serovar lai str. 56601

+ Treponema denticola ATCC 35405

+ Treponema pallidum

+ Treponema pallidum subsp. pallidum SS14, SS14

+ COG functional categories

+ (Clickable) linear whole genome views

+ Horizontal gene transfer (predicted by SIGI-HMM)

+ Sequence retrieval

+ Advanced search

+ Sequence similarity search

+ Best bidirectional hits (protein-based analysis)

+ Gene core sets (protein-based analysis)

+ Gene partnerships (DNA-based analysis)

+ Protein variations (protein-based analysis)

+ Synteny analysis (protein-based analysis)

+ Gene conservation (protein-based analysis)

+ Codon and amino acid usages (DNA- and protein-based analysis)

+ Alignments of whole reference and target genomic elements (DNA-based analysis)

Gene list

Applied filters:

COG category: Secondary metabolites biosynthesis, transport and catabolism
Organism: Borrelia hermsii DAH, DAH

Number of genes found: 8

Free access


Show UniProt / TrEMBL protein name		View in Fasta format (DNA)		View in Fasta format (Protein)

Borrelia hermsii DAH, DAH

Name	Locus tag	Product / Description	Genomic element	Type	Begin	Length	Strand	GC-content
NA	BH0140	acriflavin resistance plasma membrane protein	chromosome	CDS	139038	3270	-	0.322324
NA	BH0740	tRNA (5-aminomethyl-2-thiouridylate) methyltransferase	chromosome	CDS	792437	678	-	0.280236
NA	BH0473	Na+ driven multidrug efflux pump	chromosome	CDS	497907	1347	+	0.302153
NA	BH0573	ABC transporter ATP-binding protein	chromosome	CDS	596810	819	+	0.282051
NA	BH0754	bacitracin transport ATP-binding protein BcrA	chromosome	CDS	808479	927	-	0.283711
NA	BH0141	acriflavin resistance periplasmic protein	chromosome	CDS	142311	978	-	0.317996
NA	BH0704	acyl carrier protein	chromosome	CDS	747737	264	+	0.333333
NA	BH0584	Na+ driven multidrug efflux pump	chromosome	CDS	610688	1344	+	0.27753