SGB - The Spirochetes Genome Browser - Gene list

Title

+ Borrelia afzelii, PKo

+ Borrelia burgdorferi ZS7, ZS7

+ Borrelia burgdorferi, B31

+ Borrelia duttonii Ly, Ly

+ Borrelia garinii High passage (300), PBi

+ Borrelia garinii, PBi

+ Borrelia hermsii DAH, DAH

+ Borrelia recurrentis A1, A1

+ Borrelia turicatae 91E135, 91E135

+ Leptospira biflexa serovar Patoc strain Patoc 1 (Ames), Patoc 1 (Ames)

+ Leptospira biflexa serovar Patoc strain Patoc 1 (Paris), Patoc 1 (Paris)

+ Leptospira borgpetersenii serovar Hardjo-bovis JB197, JB197

+ Leptospira borgpetersenii serovar Hardjo-bovis L550, L550

+ Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130

+ Leptospira interrogans serovar lai str. 56601

+ Treponema denticola ATCC 35405

+ Treponema pallidum

+ Treponema pallidum subsp. pallidum SS14, SS14

+ COG functional categories

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+ Horizontal gene transfer (predicted by SIGI-HMM)

+ Sequence retrieval

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+ Sequence similarity search

+ Best bidirectional hits (protein-based analysis)

+ Gene core sets (protein-based analysis)

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+ Synteny analysis (protein-based analysis)

+ Gene conservation (protein-based analysis)

+ Codon and amino acid usages (DNA- and protein-based analysis)

+ Alignments of whole reference and target genomic elements (DNA-based analysis)

Gene list

Applied filters:

COG category: Secondary metabolites biosynthesis, transport and catabolism
Organism: Borrelia duttonii Ly, Ly

Number of genes found: 9

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Hide UniProt / TrEMBL protein name		View in Fasta format (DNA)		View in Fasta format (Protein)

Borrelia duttonii Ly, Ly

Name	Locus tag	Product / Description	UniProt / TrEMBL protein name	Genomic element	Type	Begin	Length	Strand	GC-content
NA	BDU_577	ABC transporter, ATP-binding protein	SubName: Full=ABC transporter, ATP-binding protein;	chromosome	CDS	603562	822	+	0.249392
NA	BDU_706	acyl carrier protein	RecName: Full=Acyl carrier protein; Short=ACP;	chromosome	CDS	752632	264	+	0.325758
NA	BDU_743	uncharacterized conserved protein	SubName: Full=Uncharacterized conserved protein;	chromosome	CDS	796741	690	-	0.233333
NA	BDU_758	putative ABC-2 type transport system ATP-binding protein	SubName: Full=Putative ABC-2 type transport system ATP-binding protein;	chromosome	CDS	812481	927	-	0.275081
NA	BDU_586	conserved hypothetical integral membrane protein	SubName: Full=Conserved hypothetical integral membrane protein;	chromosome	CDS	616593	1344	+	0.269345
NA	BDU_477	conserved hypothetical integral membrane protein	SubName: Full=Conserved hypothetical integral membrane protein;	chromosome	CDS	505920	1359	+	0.284768
acrB	BDU_143	acriflavine resistance protein	SubName: Full=Acriflavine resistance protein;	chromosome	CDS	150320	3240	-	0.285494
mtrC	BDU_144	membrane fusion protein	SubName: Full=Membrane fusion protein;	chromosome	CDS	153563	879	-	0.334471
pncA	BDU_1138	pyrazinamidase/nicotinamidase	SubName: Full=Pyrazinamidase/nicotinamidase; EC=3.5.1.19;	pl165	CDS	154977	615	+	0.295935