SGB - The Spirochetes Genome Browser - Gene list

Title

+ Borrelia afzelii, PKo

+ Borrelia burgdorferi ZS7, ZS7

+ Borrelia burgdorferi, B31

+ Borrelia duttonii Ly, Ly

+ Borrelia garinii High passage (300), PBi

+ Borrelia garinii, PBi

+ Borrelia hermsii DAH, DAH

+ Borrelia recurrentis A1, A1

+ Borrelia turicatae 91E135, 91E135

+ Leptospira biflexa serovar Patoc strain Patoc 1 (Ames), Patoc 1 (Ames)

+ Leptospira biflexa serovar Patoc strain Patoc 1 (Paris), Patoc 1 (Paris)

+ Leptospira borgpetersenii serovar Hardjo-bovis JB197, JB197

+ Leptospira borgpetersenii serovar Hardjo-bovis L550, L550

+ Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130

+ Leptospira interrogans serovar lai str. 56601

+ Treponema denticola ATCC 35405

+ Treponema pallidum

+ Treponema pallidum subsp. pallidum SS14, SS14

+ COG functional categories

+ (Clickable) linear whole genome views

+ Horizontal gene transfer (predicted by SIGI-HMM)

+ Sequence retrieval

+ Advanced search

+ Sequence similarity search

+ Best bidirectional hits (protein-based analysis)

+ Gene core sets (protein-based analysis)

+ Gene partnerships (DNA-based analysis)

+ Protein variations (protein-based analysis)

+ Synteny analysis (protein-based analysis)

+ Gene conservation (protein-based analysis)

+ Codon and amino acid usages (DNA- and protein-based analysis)

+ Alignments of whole reference and target genomic elements (DNA-based analysis)

Gene list

Applied filters:

COG category: Signal transduction mechanisms
Organism: Borrelia hermsii DAH, DAH

Number of genes found: 19

Free access


Show UniProt / TrEMBL protein name		View in Fasta format (DNA)		View in Fasta format (Protein)

Borrelia hermsii DAH, DAH

Name	Locus tag	Product / Description	Genomic element	Type	Begin	Length	Strand	GC-content
NA	BH0419	two-component response regulator	chromosome	CDS	432912	933	-	0.306538
NA	BH0198	guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase	chromosome	CDS	194456	2004	+	0.287425
NA	BH0763	sigma-54-dependent transcriptional activator	chromosome	CDS	815896	1356	-	0.323009
NA	BH0414	pili chemotaxis protein methyltransferase CheR-like PilK	chromosome	CDS	427846	861	+	0.284553
NA	BH0377	autoinducer-2 production protein LuxS	chromosome	CDS	389608	474	+	0.310127
NA	BH0672	two-component response regulator	chromosome	CDS	717329	441	+	0.319728
NA	BH0168	DnaK suppressor protein	chromosome	CDS	169444	384	-	0.294271
NA	BH0184	carbon storage regulator	chromosome	CDS	185748	237	+	0.198312
NA	BH0415	protein-glutamate methylesterase	chromosome	CDS	428742	1149	+	0.29765
NA	BH0606	chemotaxis protein CheD	chromosome	CDS	640678	528	+	0.333333
NA	BH0420	sensory transduction protein kinase	chromosome	CDS	433844	4473	-	0.277442
NA	BH0363	sensory box/GGDEF family protein	chromosome	CDS	374390	1992	+	0.253514
NA	BH0040	chemotaxis protein methyltransferase	chromosome	CDS	39659	846	+	0.251773
NA	BH0522A	transcriptional regulatory protein	chromosome	CDS	539919	1584	+	0.270202
NA	BH0764	nitrogen regulation protein NtrB	chromosome	CDS	817244	1161	-	0.256675
NA	BH0570	chemotaxis protein CheY	chromosome	CDS	592783	375	+	0.357333
NA	BH0551	chemotaxis protein CheY	chromosome	CDS	569759	381	-	0.335958
NA	BH0568	protein-glutamate methylesterase	chromosome	CDS	589822	1152	+	0.319444
NA	BH0374	sensory transduction protein	chromosome	CDS	386555	1140	+	0.291228