SGB - The Spirochetes Genome Browser - Gene list

Title

+ Borrelia afzelii, PKo

+ Borrelia burgdorferi ZS7, ZS7

+ Borrelia burgdorferi, B31

+ Borrelia duttonii Ly, Ly

+ Borrelia garinii High passage (300), PBi

+ Borrelia garinii, PBi

+ Borrelia hermsii DAH, DAH

+ Borrelia recurrentis A1, A1

+ Borrelia turicatae 91E135, 91E135

+ Leptospira biflexa serovar Patoc strain Patoc 1 (Ames), Patoc 1 (Ames)

+ Leptospira biflexa serovar Patoc strain Patoc 1 (Paris), Patoc 1 (Paris)

+ Leptospira borgpetersenii serovar Hardjo-bovis JB197, JB197

+ Leptospira borgpetersenii serovar Hardjo-bovis L550, L550

+ Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130

+ Leptospira interrogans serovar lai str. 56601

+ Treponema denticola ATCC 35405

+ Treponema pallidum

+ Treponema pallidum subsp. pallidum SS14, SS14

+ COG functional categories

+ (Clickable) linear whole genome views

+ Horizontal gene transfer (predicted by SIGI-HMM)

+ Sequence retrieval

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+ Sequence similarity search

+ Best bidirectional hits (protein-based analysis)

+ Gene core sets (protein-based analysis)

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+ Protein variations (protein-based analysis)

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+ Gene conservation (protein-based analysis)

+ Codon and amino acid usages (DNA- and protein-based analysis)

+ Alignments of whole reference and target genomic elements (DNA-based analysis)

Gene list

Applied filters:

COG category: Signal transduction mechanisms
Organism: Borrelia duttonii Ly, Ly

Number of genes found: 19

Free access


Show UniProt / TrEMBL protein name		View in Fasta format (DNA)		View in Fasta format (Protein)

Borrelia duttonii Ly, Ly

Name	Locus tag	Product / Description	Genomic element	Type	Begin	Length	Strand	GC-content
NA	BDU_369	uncharacterized conserved protein	chromosome	CDS	397547	1146	+	0.260908
NA	BDU_414	sensory transduction histidine kinase	chromosome	CDS	443576	4446	-	0.255061
NA	BDU_167	DnaK suppressor	chromosome	CDS	180775	384	-	0.268229
NA	BDU_768	sensory transduction histidine kinase, putative	chromosome	CDS	821146	1161	-	0.226529
NA	BDU_523	Response regulator receiver (CheY) modulated Serine phosphatase	chromosome	CDS	547215	1590	+	0.260377
NA	BDU_360	periplasmic protein	chromosome	CDS	385399	1998	+	0.237237
NA	BDU_607	chemotaxis protein CheD	chromosome	CDS	646699	504	+	0.315476
NA	BDU_372	autoinducer-2 production protein	chromosome	CDS	400518	558	+	0.293907
cheB-1	BDU_409	protein-glutamate methylesterase	chromosome	CDS	438382	1161	+	0.27304
cheB-2	BDU_570	protein-glutamate methylesterase	chromosome	CDS	596719	1152	+	0.289062
cheR-1	BDU_45	chemotaxis protein methyltransferase	chromosome	CDS	50906	864	+	0.237269
cheR-2	BDU_408	chemotaxis protein methyltransferase	chromosome	CDS	437483	864	+	0.258102
cheY-1	BDU_553	chemotaxis response regulator	chromosome	CDS	576916	411	-	0.289538
cheY-2	BDU_572	chemotaxis response regulator	chromosome	CDS	599679	375	+	0.357333
cheY-3	BDU_675	chemotaxis response regulator	chromosome	CDS	722823	441	+	0.321995
csrA	BDU_183	carbon storage regulator	chromosome	CDS	197088	237	+	0.198312
rrp-1	BDU_413	response regulatory protein	chromosome	CDS	442647	933	-	0.280815
rrp-2	BDU_767	response regulatory protein	chromosome	CDS	819798	1356	-	0.291298
spoT	BDU_196	guanosine-3,5-bis(diphosphate) 3-pyrophosphohydrolase	chromosome	CDS	205811	2004	+	0.266467