SGB - The Spirochetes Genome Browser - Gene list

Title

+ Borrelia afzelii, PKo

+ Borrelia burgdorferi ZS7, ZS7

+ Borrelia burgdorferi, B31

+ Borrelia duttonii Ly, Ly

+ Borrelia garinii High passage (300), PBi

+ Borrelia garinii, PBi

+ Borrelia hermsii DAH, DAH

+ Borrelia recurrentis A1, A1

+ Borrelia turicatae 91E135, 91E135

+ Leptospira biflexa serovar Patoc strain Patoc 1 (Ames), Patoc 1 (Ames)

+ Leptospira biflexa serovar Patoc strain Patoc 1 (Paris), Patoc 1 (Paris)

+ Leptospira borgpetersenii serovar Hardjo-bovis JB197, JB197

+ Leptospira borgpetersenii serovar Hardjo-bovis L550, L550

+ Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130

+ Leptospira interrogans serovar lai str. 56601

+ Treponema denticola ATCC 35405

+ Treponema pallidum

+ Treponema pallidum subsp. pallidum SS14, SS14

+ COG functional categories

+ (Clickable) linear whole genome views

+ Horizontal gene transfer (predicted by SIGI-HMM)

+ Sequence retrieval

+ Advanced search

+ Sequence similarity search

+ Best bidirectional hits (protein-based analysis)

+ Gene core sets (protein-based analysis)

+ Gene partnerships (DNA-based analysis)

+ Protein variations (protein-based analysis)

+ Synteny analysis (protein-based analysis)

+ Gene conservation (protein-based analysis)

+ Codon and amino acid usages (DNA- and protein-based analysis)

+ Alignments of whole reference and target genomic elements (DNA-based analysis)

Gene list

Applied filters:

COG category: Signal transduction mechanisms
Organism: Borrelia recurrentis A1, A1

Number of genes found: 20

Free access


Show UniProt / TrEMBL protein name		View in Fasta format (DNA)		View in Fasta format (Protein)

Borrelia recurrentis A1, A1

Name	Locus tag	Product / Description	Genomic element	Type	Begin	Length	Strand	GC-content
NA	BRE_771	sensory transduction histidine kinase, putative	chromosome	CDS	827777	1161	-	0.226529
NA	BRE_166	DnaK suppressor	chromosome	CDS	181654	384	-	0.263021
NA	BRE_418	sensory transduction histidine kinase	chromosome	CDS	451324	4446	-	0.253936
NA	BRE_526	Response regulator receiver (CheY) modulated Serine phosphatase	chromosome	CDS	553835	1590	+	0.260377
NA	BRE_376	autoinducer-2 production protein	chromosome	CDS	408252	558	+	0.290323
NA	BRE_807	hypothetical protein	chromosome	CDS	862737	510	-	0.211765
NA	BRE_610	chemotaxis protein CheD	chromosome	CDS	653314	504	+	0.321429
NA	BRE_364	periplasmic protein	chromosome	CDS	393131	1998	+	0.234234
NA	BRE_373	uncharacterized conserved protein	chromosome	CDS	405281	1146	+	0.259162
cheB-1	BRE_413	protein-glutamate methylesterase	chromosome	CDS	446129	1161	+	0.269595
cheB-2	BRE_573	protein-glutamate methylesterase	chromosome	CDS	603323	1152	+	0.288194
cheR-1	BRE_44	chemotaxis protein methyltransferase	chromosome	CDS	51775	873	+	0.232532
cheR-2	BRE_412	chemotaxis protein methyltransferase	chromosome	CDS	445230	864	+	0.256944
cheY-1	BRE_556	chemotaxis response regulator	chromosome	CDS	583527	411	-	0.282238
cheY-2	BRE_575	chemotaxis response regulator	chromosome	CDS	606283	375	+	0.352
cheY3	BRE_678	chemotaxis response regulator	chromosome	CDS	729455	441	+	0.324263
csrA	BRE_182	carbon storage regulator	chromosome	CDS	197966	237	+	0.198312
rrp-1	BRE_417	response regulatory protein	chromosome	CDS	450395	933	-	0.279743
rrp-2	BRE_770	response regulatory protein	chromosome	CDS	826429	1356	-	0.289823
spoT	BRE_195	guanosine-3,5-bis(diphosphate) 3-pyrophosphohydrolase	chromosome	CDS	206689	2004	+	0.263972