SGB - The Spirochetes Genome Browser - Gene list

Title

+ Borrelia afzelii, PKo

+ Borrelia burgdorferi ZS7, ZS7

+ Borrelia burgdorferi, B31

+ Borrelia duttonii Ly, Ly

+ Borrelia garinii High passage (300), PBi

+ Borrelia garinii, PBi

+ Borrelia hermsii DAH, DAH

+ Borrelia recurrentis A1, A1

+ Borrelia turicatae 91E135, 91E135

+ Leptospira biflexa serovar Patoc strain Patoc 1 (Ames), Patoc 1 (Ames)

+ Leptospira biflexa serovar Patoc strain Patoc 1 (Paris), Patoc 1 (Paris)

+ Leptospira borgpetersenii serovar Hardjo-bovis JB197, JB197

+ Leptospira borgpetersenii serovar Hardjo-bovis L550, L550

+ Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130

+ Leptospira interrogans serovar lai str. 56601

+ Treponema denticola ATCC 35405

+ Treponema pallidum

+ Treponema pallidum subsp. pallidum SS14, SS14

+ COG functional categories

+ (Clickable) linear whole genome views

+ Horizontal gene transfer (predicted by SIGI-HMM)

+ Sequence retrieval

+ Advanced search

+ Sequence similarity search

+ Best bidirectional hits (protein-based analysis)

+ Gene core sets (protein-based analysis)

+ Gene partnerships (DNA-based analysis)

+ Protein variations (protein-based analysis)

+ Synteny analysis (protein-based analysis)

+ Gene conservation (protein-based analysis)

+ Codon and amino acid usages (DNA- and protein-based analysis)

+ Alignments of whole reference and target genomic elements (DNA-based analysis)

Gene list

Applied filters:

COG category: Intracellular trafficking and secretion
Organism: Borrelia garinii, PBi

Number of genes found: 10

Free access


Show UniProt / TrEMBL protein name		View in Fasta format (DNA)		View in Fasta format (Protein)

Borrelia garinii, PBi

Name	Locus tag	Product / Description	Genomic element	Type	Begin	Length	Strand	GC-content
NA	BG0301	smg protein	chromosome linear	CDS	304538	858	-	0.300699
flhA	BG0274	flagellar biosynthesis protein	chromosome linear	CDS	282648	2091	-	0.322812
fliI	BG0291	flagellum-specific ATP synthase	chromosome linear	CDS	296242	1311	-	0.320366
lepB-1	BG0030	signal peptidase I	chromosome linear	CDS	27712	636	-	0.232704
lepB-2	BG0031	signal peptidase I	chromosome linear	CDS	28349	981	-	0.292559
lepB-3	BG0266	signal peptidase I	chromosome linear	CDS	275448	393	+	0.231552
ospB	BGA15	outer surface protein B	lp54	CDS	10531	885	+	0.329944
secA	BG0152	preprotein translocase subunit	chromosome linear	CDS	153281	2700	-	0.332963
secD	BG0675	protein-export membrane protein	chromosome linear	CDS	692898	1671	+	0.327947
secY	BG0510	preprotein translocase subunit	chromosome linear	CDS	507876	1305	+	0.297318