SGB - The Spirochetes Genome Browser - Summary for Borrelia garinii High passage (300), PBi.

	Borrelia garinii High passage (300), PBi
Genomic elements	13 segment(s) Show details
Genome features	CDS: 1353 genes, length ø 829 bp, gc-content ø 0.281 Confidence [min/max/avg]: 2/99/79.9231 Coverage [min/max/avg]: 1/25/4.3311 '+'-strand: 662 genes, length ø 826 bp, gc-content ø 0.279 Confidence [min/max/avg]: 2/99/81.1073 Coverage [min/max/avg]: 1/25/4.6405 '-'-strand: 691 genes, length ø 832 bp, gc-content ø 0.283 Confidence [min/max/avg]: 2/99/78.7887 Coverage [min/max/avg]: 1/19/4.0347 rRNA: 5 genes, length ø 1526 bp, gc-content ø 0.459 Confidence [min/max/avg]: 2/99/95.8000 Coverage [min/max/avg]: 1/20/8.0000 '+'-strand: 4 genes, length ø 1523 bp, gc-content ø 0.458 Confidence [min/max/avg]: 2/99/95.2500 Coverage [min/max/avg]: 1/20/7.7500 '-'-strand: 1 genes, length ø 1538 bp, gc-content ø 0.464 Confidence [min/max/avg]: 87/99/98.0000 Coverage [min/max/avg]: 5/15/9.0000 tRNA: 33 genes, length ø 76 bp, gc-content ø 0.543 Confidence [min/max/avg]: 2/99/73.9091 Coverage [min/max/avg]: 1/16/3.7273 '+'-strand: 21 genes, length ø 77 bp, gc-content ø 0.539 Confidence [min/max/avg]: 2/99/76.2381 Coverage [min/max/avg]: 1/7/3.4762 '-'-strand: 12 genes, length ø 74 bp, gc-content ø 0.551 Confidence [min/max/avg]: 2/99/69.8333 Coverage [min/max/avg]: 1/16/4.1667 variation: 38 genes, length ø 1 bp, gc-content ø 0.21 Confidence [min/max/avg]: 13/99/85.0789 Coverage [min/max/avg]: 2/12/5.4211 '+'-strand: 38 genes, length ø 1 bp, gc-content ø 0.21 Confidence [min/max/avg]: 13/99/85.0789 Coverage [min/max/avg]: 2/12/5.4211 '-'-strand: 0 genes, length ø 0 bp, gc-content ø 0
COG categories
Amino acid transport and metabolism [E]	39
Carbohydrate transport and metabolism [G]	54
Cell cycle control, mitosis and meiosis [D]	49
Cell motility [N]	77
Cell wall/membrane biogenesis [M]	47
Chromatin structure and dynamics [B]	0
Coenzyme transport and metabolism [H]	13
Cytoskeleton [Z]	0
Defense mechanisms [V]	2
Energy production and conversion [C]	27
Extracellular structures [W]	1
Function unknown [S]	49
General function prediction only [R]	99
Inorganic ion transport and metabolism [P]	33
Intracellular trafficking and secretion [U]	2
Lipid transport and metabolism [I]	17
NOT ANALYZED	76
Nuclear structure [Y]	0
Nucleotide transport and metabolism [F]	25
Posttranslational modification, protein turnover, chaperones [O]	32
RNA processing and modification [A]	0
Replication, recombination and repair [L]	85
Secondary metabolites biosynthesis, transport and catabolism [Q]	11
Signal transduction mechanisms [T]	25
Transcription [K]	28
Translation, ribosomal structure and biogenesis [J]	116
Unclassified [-]	574