SGB - The Spirochetes Genome Browser - Summary for Borrelia recurrentis A1, A1.

	Borrelia recurrentis A1, A1
Genomic elements	1 chromosomes(s), 7 linear plasmid(s) Hide details chromosome length: 930981 bp gc-content (intragenic): 0.287952 % CDS: 800 genes, length ø 1057 bp, gc-content ø 0.276 '+'-strand: 401 genes, length ø 1061 bp, gc-content ø 0.277 '-'-strand: 399 genes, length ø 1052 bp, gc-content ø 0.275 pseudo: 20 genes, length ø 1165 bp, gc-content ø 0.294 '+'-strand: 9 genes, length ø 1156 bp, gc-content ø 0.28 '-'-strand: 11 genes, length ø 1172 bp, gc-content ø 0.305 rRNA: 3 genes, length ø 1532 bp, gc-content ø 0.456 '+'-strand: 0 genes, length ø 0 bp, gc-content ø 0 Confidence [min/max/avg]: // Coverage [min/max/avg]: // '-'-strand: 3 genes, length ø 1532 bp, gc-content ø 0.456 tRNA: 32 genes, length ø 76 bp, gc-content ø 0.554 '+'-strand: 20 genes, length ø 77 bp, gc-content ø 0.55 '-'-strand: 12 genes, length ø 74 bp, gc-content ø 0.56 tmRNA: 1 genes, length ø 364 bp, gc-content ø 0.321 '+'-strand: 0 genes, length ø 0 bp, gc-content ø 0 Confidence [min/max/avg]: // Coverage [min/max/avg]: // '-'-strand: 1 genes, length ø 364 bp, gc-content ø 0.321 pl124 length: 123937 bp gc-content (intragenic): 0.276575 % CDS: 91 genes, length ø 846 bp, gc-content ø 0.276 '+'-strand: 28 genes, length ø 964 bp, gc-content ø 0.274 '-'-strand: 63 genes, length ø 794 bp, gc-content ø 0.277 pseudo: 19 genes, length ø 1013 bp, gc-content ø 0.276 '+'-strand: 8 genes, length ø 1293 bp, gc-content ø 0.275 '-'-strand: 11 genes, length ø 809 bp, gc-content ø 0.277 pl23 length: 22945 bp gc-content (intragenic): 0.264887 % CDS: 17 genes, length ø 790 bp, gc-content ø 0.259 '+'-strand: 8 genes, length ø 885 bp, gc-content ø 0.277 '-'-strand: 9 genes, length ø 706 bp, gc-content ø 0.244 pseudo: 4 genes, length ø 915 bp, gc-content ø 0.286 '+'-strand: 1 genes, length ø 682 bp, gc-content ø 0.239 '-'-strand: 3 genes, length ø 993 bp, gc-content ø 0.302 pl33 length: 33213 bp gc-content (intragenic): 0.310914 % CDS: 17 genes, length ø 650 bp, gc-content ø 0.294 '+'-strand: 12 genes, length ø 730 bp, gc-content ø 0.299 '-'-strand: 5 genes, length ø 459 bp, gc-content ø 0.282 pseudo: 13 genes, length ø 799 bp, gc-content ø 0.332 '+'-strand: 8 genes, length ø 806 bp, gc-content ø 0.342 '-'-strand: 5 genes, length ø 789 bp, gc-content ø 0.317 pl35 length: 35315 bp gc-content (intragenic): 0.284091 % CDS: 15 genes, length ø 710 bp, gc-content ø 0.28 '+'-strand: 11 genes, length ø 718 bp, gc-content ø 0.276 '-'-strand: 4 genes, length ø 690 bp, gc-content ø 0.292 pseudo: 19 genes, length ø 759 bp, gc-content ø 0.286 '+'-strand: 10 genes, length ø 773 bp, gc-content ø 0.291 '-'-strand: 9 genes, length ø 744 bp, gc-content ø 0.282 pl37 length: 36869 bp gc-content (intragenic): 0.324484 % CDS: 19 genes, length ø 832 bp, gc-content ø 0.311 '+'-strand: 11 genes, length ø 834 bp, gc-content ø 0.334 '-'-strand: 8 genes, length ø 829 bp, gc-content ø 0.28 pseudo: 11 genes, length ø 710 bp, gc-content ø 0.346 '+'-strand: 8 genes, length ø 760 bp, gc-content ø 0.371 '-'-strand: 3 genes, length ø 578 bp, gc-content ø 0.28 pl53 length: 52772 bp gc-content (intragenic): 0.305451 % CDS: 28 genes, length ø 699 bp, gc-content ø 0.288 '+'-strand: 14 genes, length ø 703 bp, gc-content ø 0.31 '-'-strand: 14 genes, length ø 696 bp, gc-content ø 0.266 pseudo: 27 genes, length ø 626 bp, gc-content ø 0.322 '+'-strand: 17 genes, length ø 640 bp, gc-content ø 0.327 '-'-strand: 10 genes, length ø 601 bp, gc-content ø 0.315 pl6 length: 6131 bp gc-content (intragenic): 0.257277 % CDS: 3 genes, length ø 601 bp, gc-content ø 0.258 '+'-strand: 1 genes, length ø 525 bp, gc-content ø 0.222 '-'-strand: 2 genes, length ø 639 bp, gc-content ø 0.275 pseudo: 1 genes, length ø 357 bp, gc-content ø 0.254 '+'-strand: 0 genes, length ø 0 bp, gc-content ø 0 Confidence [min/max/avg]: // Coverage [min/max/avg]: // '-'-strand: 1 genes, length ø 357 bp, gc-content ø 0.254
Genome features	CDS: 990 genes, length ø 1005 bp, gc-content ø 0.277 '+'-strand: 486 genes, length ø 1020 bp, gc-content ø 0.28 '-'-strand: 504 genes, length ø 990 bp, gc-content ø 0.274 pseudo: 114 genes, length ø 843 bp, gc-content ø 0.305 '+'-strand: 61 genes, length ø 862 bp, gc-content ø 0.314 '-'-strand: 53 genes, length ø 821 bp, gc-content ø 0.296 rRNA: 3 genes, length ø 1532 bp, gc-content ø 0.456 '+'-strand: 0 genes, length ø 0 bp, gc-content ø 0 '-'-strand: 3 genes, length ø 1532 bp, gc-content ø 0.456 tRNA: 32 genes, length ø 76 bp, gc-content ø 0.554 '+'-strand: 20 genes, length ø 77 bp, gc-content ø 0.55 '-'-strand: 12 genes, length ø 74 bp, gc-content ø 0.56 tmRNA: 1 genes, length ø 364 bp, gc-content ø 0.321 '+'-strand: 0 genes, length ø 0 bp, gc-content ø 0 '-'-strand: 1 genes, length ø 364 bp, gc-content ø 0.321
COG categories
Amino acid transport and metabolism [E]	29
Carbohydrate transport and metabolism [G]	39
Cell cycle control, mitosis and meiosis [D]	33
Cell motility [N]	77
Cell wall/membrane biogenesis [M]	45
Chromatin structure and dynamics [B]	0
Coenzyme transport and metabolism [H]	13
Cytoskeleton [Z]	0
Defense mechanisms [V]	0
Energy production and conversion [C]	20
Extracellular structures [W]	0
Function unknown [S]	44
General function prediction only [R]	81
Inorganic ion transport and metabolism [P]	25
Intracellular trafficking and secretion [U]	0
Lipid transport and metabolism [I]	15
NOT ANALYZED	150
Nuclear structure [Y]	0
Nucleotide transport and metabolism [F]	29
Posttranslational modification, protein turnover, chaperones [O]	33
RNA processing and modification [A]	0
Replication, recombination and repair [L]	56
Secondary metabolites biosynthesis, transport and catabolism [Q]	8
Signal transduction mechanisms [T]	20
Transcription [K]	23
Translation, ribosomal structure and biogenesis [J]	115
Unclassified [-]	313